| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Paraburkholderia sabiae LMG 24235 | 1.0 | QEN71_RS28660 | | 5-oxoprolinase subunit PxpA | 1.0 | QEN71_RS27850 | | MarC family protein | 0.72 | 3 |
| Paraburkholderia graminis OAS925 | 0.93 | ABIE53_000049 | | UPF0271 protein | 0.87 | ABIE53_003698 | | multiple antibiotic resistance protein | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.93 | H281DRAFT_05811 | | UPF0271 protein | 0.88 | H281DRAFT_05656 | | multiple antibiotic resistance protein | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.92 | BPHYT_RS18635 | | LamB/YcsF family protein | 0.88 | BPHYT_RS17695 | | membrane protein | low | > 109 |
| Ralstonia solanacearum PSI07 | 0.69 | RPSI07_RS13790 | | LamB/YcsF family protein | 0.64 | RPSI07_RS10405 | | membrane protein | — | — |
| Variovorax sp. OAS795 | 0.69 | ABID97_RS23840 | | 5-oxoprolinase subunit PxpA | 0.43 | ABID97_RS00755 | | MarC family protein | low | > 91 |
| Ralstonia solanacearum IBSBF1503 | 0.68 | RALBFv3_RS03425 | | LamB/YcsF family protein | 0.65 | RALBFv3_RS06830 | | membrane protein | — | — |
| Ralstonia solanacearum UW163 | 0.68 | UW163_RS10245 | | LamB/YcsF family protein | 0.65 | UW163_RS06785 | | membrane protein | — | — |
| Ralstonia solanacearum GMI1000 | 0.68 | RS_RS10885 | | LamB/YcsF family protein | 0.65 | RS_RS14775 | | membrane protein | — | — |
| Ralstonia sp. UNC404CL21Col | 0.68 | ABZR87_RS15325 | | 5-oxoprolinase subunit PxpA | 0.65 | ABZR87_RS02485 | | MarC family protein | low | > 80 |
| Variovorax sp. SCN45 | 0.66 | GFF2324 | | Lactam utilization protein LamB | 0.43 | GFF3614 | | UPF0056 inner membrane protein YchE | low | > 127 |
| Cupriavidus basilensis FW507-4G11 | 0.63 | RR42_RS00650 | | hypothetical protein | 0.63 | RR42_RS18900 | | membrane protein | low | > 128 |
| Escherichia coli ECRC62 | 0.61 | BNILDI_21375 | pxpA | 5-oxoprolinase subunit PxpA | 0.40 | BNILDI_18580 | ychE | NAAT family transporter YchE | low | > 75 |
| Escherichia coli ECRC102 | 0.61 | NIAGMN_05050 | pxpA | 5-oxoprolinase subunit PxpA | 0.40 | NIAGMN_27620 | ychE | NAAT family transporter YchE | — | — |
| Escherichia coli ECRC98 | 0.61 | JDDGAC_10650 | pxpA | 5-oxoprolinase subunit PxpA | 0.40 | JDDGAC_05960 | ychE | NAAT family transporter YchE | low | > 86 |
| Escherichia coli ECRC101 | 0.61 | MCAODC_26215 | pxpA | 5-oxoprolinase subunit PxpA | 0.40 | MCAODC_21645 | ychE | NAAT family transporter YchE | low | > 87 |
| Escherichia coli ECRC99 | 0.61 | KEDOAH_20970 | pxpA | 5-oxoprolinase subunit PxpA | 0.40 | KEDOAH_25610 | ychE | NAAT family transporter YchE | — | — |
| Escherichia coli ECOR27 | 0.61 | NOLOHH_23380 | pxpA | 5-oxoprolinase subunit PxpA | 0.40 | NOLOHH_20435 | ychE | NAAT family transporter YchE | low | > 75 |
| Escherichia coli BL21 | 0.61 | ECD_00673 | | UPF0271 family protein | 0.40 | ECD_01216 | | UPF0056 family inner membrane protein | low | > 61 |
| Escherichia coli ECRC100 | 0.61 | OKFHMN_06995 | pxpA | 5-oxoprolinase subunit PxpA | 0.40 | OKFHMN_28615 | ychE | NAAT family transporter YchE | low | > 80 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.61 | OHPLBJKB_03004 | | hypothetical protein | 0.40 | OHPLBJKB_02443 | | hypothetical protein | low | > 73 |
| Escherichia coli BW25113 | 0.61 | b0713 | ybgL | hypothetical protein (NCBI) | 0.40 | b1242 | ychE | predicted inner membrane protein (NCBI) | low | > 76 |
| Escherichia coli Nissle 1917 | 0.61 | ECOLIN_RS03815 | | 5-oxoprolinase subunit PxpA | 0.40 | ECOLIN_RS07505 | | NAAT family transporter YchE | — | — |
| Escherichia fergusonii Becca | 0.61 | EFB2_03390 | | 5-oxoprolinase subunit A | 0.40 | EFB2_02685 | | hypothetical protein | low | > 86 |
| Escherichia coli ECOR38 | 0.61 | HEPCGN_01215 | pxpA | 5-oxoprolinase subunit PxpA | 0.40 | HEPCGN_25080 | ychE | NAAT family transporter YchE | low | > 87 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.60 | GFF4618 | | Lactam utilization protein LamB | 0.40 | GFF2748 | | Putative membrane protein | low | > 78 |
| Klebsiella michiganensis M5al | 0.59 | BWI76_RS08360 | | LamB/YcsF family protein | 0.41 | BWI76_RS17245 | | hypothetical protein | low | > 92 |
| Rahnella sp. WP5 | 0.59 | EX31_RS23395 | | 5-oxoprolinase subunit PxpA | 0.41 | EX31_RS10070 | | YchE family NAAT transporter | low | > 89 |
| Pantoea sp. MT58 | 0.58 | IAI47_13795 | | 5-oxoprolinase subunit PxpA | 0.41 | IAI47_09060 | | YchE family NAAT transporter | low | > 76 |
| Serratia liquefaciens MT49 | 0.58 | IAI46_06225 | | 5-oxoprolinase subunit PxpA | 0.42 | IAI46_14215 | | YchE family NAAT transporter | low | > 86 |
| Enterobacter asburiae PDN3 | 0.57 | EX28DRAFT_2274 | | Uncharacterized proteins, homologs of lactam utilization protein B | 0.41 | EX28DRAFT_0866 | | membrane protein, MarC family | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.57 | HER17_RS14975 | | 5-oxoprolinase subunit PxpA | 0.24 | HER17_RS05025 | | MarC family NAAT transporter | low | > 75 |
| Dickeya dadantii 3937 | 0.56 | DDA3937_RS06425 | | 5-oxoprolinase subunit PxpA | 0.40 | DDA3937_RS10370 | | YchE family NAAT transporter | low | > 74 |
| Dickeya dianthicola ME23 | 0.55 | DZA65_RS06815 | | 5-oxoprolinase subunit PxpA | 0.39 | DZA65_RS10850 | | YchE family NAAT transporter | low | > 75 |
| Dickeya dianthicola 67-19 | 0.55 | HGI48_RS06470 | | 5-oxoprolinase subunit PxpA | 0.40 | HGI48_RS10375 | | YchE family NAAT transporter | low | > 71 |
| Enterobacter sp. TBS_079 | 0.54 | MPMX20_01347 | | 5-oxoprolinase subunit A | 0.42 | MPMX20_02588 | | hypothetical protein | low | > 85 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.49 | CA264_08790 | | LamB/YcsF family protein | 0.27 | CA264_12605 | | stress protection protein MarC | low | > 74 |
| Shewanella loihica PV-4 | 0.46 | Shew_0006 | | LamB/YcsF family protein (RefSeq) | 0.38 | Shew_1911 | | hypothetical protein (RefSeq) | — | — |
| Agrobacterium fabrum C58 | 0.45 | Atu3910 | | LamB/YcsF family protein | 0.29 | Atu1508 | | hypothetical protein | low | > 89 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.45 | Psyr_0497 | | LamB/YcsF | 0.25 | Psyr_4409 | | Multiple antibiotic resistance (MarC)-related protein | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.45 | Psyr_0497 | | LamB/YcsF | 0.25 | Psyr_4409 | | Multiple antibiotic resistance (MarC)-related protein | low | > 86 |
| Azospirillum brasilense Sp245 | 0.44 | AZOBR_RS14715 | | hypothetical protein | 0.22 | AZOBR_RS25935 | | antibiotic resistance protein | low | > 97 |
| Castellaniella sp019104865 MT123 | 0.41 | ABCV34_RS01510 | | 5-oxoprolinase subunit PxpA | 0.30 | ABCV34_RS00685 | | MarC family protein | low | > 48 |
| Rhodospirillum rubrum S1H | 0.41 | Rru_A1504 | | LamB/YcsF (NCBI) | 0.25 | Rru_A0654 | | Multiple antibiotic resistance (MarC)-related proteins (NCBI) | low | > 58 |
| Shewanella amazonensis SB2B | 0.40 | Sama_0021 | | hypothetical protein (RefSeq) | 0.42 | Sama_1694 | | hypothetical protein (RefSeq) | low | > 62 |
| Lysobacter sp. OAE881 | 0.40 | ABIE51_RS08130 | | 5-oxoprolinase subunit PxpA | 0.24 | ABIE51_RS10495 | | MarC family NAAT transporter | low | > 62 |
| Phaeobacter inhibens DSM 17395 | 0.39 | PGA1_c28700 | | LamB/YcsF family protein | 0.29 | PGA1_c19770 | | membrane protein, MarC family | low | > 62 |
| Bosea sp. OAE506 | 0.38 | ABIE41_RS24170 | | 5-oxoprolinase subunit PxpA | 0.25 | ABIE41_RS15150 | | MarC family protein | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.38 | Echvi_3010 | | Uncharacterized proteins, homologs of lactam utilization protein B | 0.16 | Echvi_1812 | | membrane protein, MarC family | low | > 79 |
| Pseudomonas simiae WCS417 | 0.37 | PS417_21910 | | LamB/YcsF family protein | 0.24 | PS417_02925 | | membrane protein | low | > 88 |
| Vibrio cholerae E7946 ATCC 55056 | 0.37 | CSW01_18055 | | hypothetical protein | 0.36 | CSW01_10170 | | MarC family protein | low | > 62 |
| Pseudomonas fluorescens SBW25-INTG | 0.36 | PFLU_RS09840 | | 5-oxoprolinase subunit PxpA | 0.24 | PFLU_RS03000 | | MarC family protein | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.36 | PFLU_RS09840 | | 5-oxoprolinase subunit PxpA | 0.24 | PFLU_RS03000 | | MarC family protein | low | > 109 |
| Pseudomonas sp. S08-1 | 0.36 | OH686_08750 | | Lactam utilization protein LamB | 0.22 | OH686_07645 | | MarC family integral membrane protein | low | > 80 |
| Pseudomonas fluorescens FW300-N2C3 | 0.35 | AO356_04335 | | hypothetical protein | 0.24 | AO356_08255 | | hypothetical protein | low | > 104 |
| Dinoroseobacter shibae DFL-12 | 0.35 | Dshi_2026 | | LamB/YcsF family protein (RefSeq) | 0.23 | Dshi_1348 | | multiple antibiotic resistance (MarC)-related protein (RefSeq) | low | > 64 |
| Pseudomonas sp. RS175 | 0.35 | PFR28_00728 | | 5-oxoprolinase subunit A 3 | 0.25 | PFR28_05211 | | hypothetical protein | low | > 88 |
| Pseudomonas putida KT2440 | 0.35 | PP_2920 | | putative nitrogen-containing compound degradation enzyme | 0.24 | PP_4825 | | Membrane protein, MarC family | low | > 96 |
| Pseudomonas fluorescens GW456-L13 | 0.35 | PfGW456L13_4478 | | Lactam utilization protein LamB | 0.25 | PfGW456L13_60 | | membrane protein, MarC family | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.35 | AO353_28820 | | lactam utilization protein LamB | 0.24 | AO353_13635 | | hypothetical protein | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.35 | Pf1N1B4_3366 | | Lactam utilization protein LamB | 0.24 | Pf1N1B4_1320 | | membrane protein, MarC family | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.34 | Pf6N2E2_2708 | | Lactam utilization protein LamB | 0.24 | Pf6N2E2_3525 | | membrane protein, MarC family | low | > 103 |
Not shown: 9 genomes with orthologs for QEN71_RS28660 only; 24 genomes with orthologs for QEN71_RS27850 only