Conservation of cofitness between QEN71_RS28915 and QEN71_RS04585 in Paraburkholderia sabiae LMG 24235

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS28915 flagellar basal body rod protein FlgC 1.0 QEN71_RS04585 MucB/RseB C-terminal domain-containing protein 0.94 15
Burkholderia phytofirmans PsJN 0.82 BPHYT_RS18890 flagellar basal body rod protein FlgC 0.86 BPHYT_RS14395 sugar dehydratase low > 109
Paraburkholderia graminis OAS925 0.81 ABIE53_000101 flagellar basal-body rod protein FlgC 0.84 ABIE53_003041 sigma-E factor negative regulatory protein RseB low > 113
Paraburkholderia bryophila 376MFSha3.1 0.80 H281DRAFT_05763 flagellar basal-body rod protein FlgC 0.84 H281DRAFT_04357 sigma E regulatory protein, MucB/RseB low > 103
Pectobacterium carotovorum WPP14 0.70 HER17_RS08170 flagellar basal body rod protein FlgC 0.09 HER17_RS05790 sigma-E factor regulatory protein RseB low > 75
Rahnella sp. WP5 0.70 EX31_RS11310 flagellar basal body rod protein FlgC 0.12 EX31_RS21810 sigma-E factor regulatory protein RseB low > 89
Dickeya dianthicola 67-19 0.69 HGI48_RS13520 flagellar basal body rod protein FlgC 0.12 HGI48_RS15840 sigma-E factor regulatory protein RseB low > 71
Dickeya dadantii 3937 0.69 DDA3937_RS13475 flagellar basal body rod protein FlgC 0.11 DDA3937_RS15755 sigma-E factor regulatory protein RseB low > 74
Dickeya dianthicola ME23 0.69 DZA65_RS14005 flagellar basal body rod protein FlgC 0.12 DZA65_RS16920 sigma-E factor regulatory protein RseB low > 75
Pantoea sp. MT58 0.66 IAI47_12160 flagellar basal body rod protein FlgC 0.13 IAI47_04860 sigma-E factor regulatory protein RseB low > 76
Erwinia tracheiphila SCR3 0.66 LU632_RS10400 flgC flagellar basal body rod protein FlgC 0.13 LU632_RS15415 rseB sigma-E factor regulatory protein RseB low > 74
Cupriavidus basilensis FW507-4G11 0.65 RR42_RS35720 flagellar basal body rod protein FlgC 0.44 RR42_RS14070 sugar dehydratase low > 128
Serratia liquefaciens MT49 0.65 IAI46_15955 flagellar basal body rod protein FlgC 0.12 IAI46_19575 sigma-E factor regulatory protein RseB low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF3355 Flagellar basal-body rod protein FlgC 0.14 GFF2109 Sigma factor RpoE negative regulatory protein RseB precursor low > 78
Variovorax sp. SCN45 0.65 GFF5716 Flagellar basal-body rod protein FlgC 0.28 GFF3865 Sigma factor RpoE negative regulatory protein RseB precursor low > 127
Escherichia coli ECRC62 0.65 BNILDI_19360 flgC flagellar basal body rod protein FlgC 0.14 BNILDI_11860 rseB sigma-E factor regulatory protein RseB low > 75
Escherichia coli ECRC98 0.65 JDDGAC_07330 flgC flagellar basal body rod protein FlgC 0.14 JDDGAC_25050 rseB sigma-E factor regulatory protein RseB low > 86
Escherichia coli ECRC100 0.65 OKFHMN_03670 flgC flagellar basal body rod protein FlgC 0.14 OKFHMN_21385 rseB sigma-E factor regulatory protein RseB low > 80
Escherichia coli ECRC101 0.65 MCAODC_23030 flgC flagellar basal body rod protein FlgC 0.14 MCAODC_11915 rseB sigma-E factor regulatory protein RseB 0.44 66
Escherichia fergusonii Becca 0.65 EFB2_02900 Flagellar basal-body rod protein FlgC 0.14 EFB2_01325 Sigma-E factor regulatory protein RseB low > 86
Escherichia coli ECRC99 0.65 KEDOAH_24085 flgC flagellar basal body rod protein FlgC 0.14 KEDOAH_06835 rseB sigma-E factor regulatory protein RseB — —
Escherichia coli ECOR27 0.65 NOLOHH_21200 flgC flagellar basal body rod protein FlgC 0.14 NOLOHH_13060 rseB sigma-E factor regulatory protein RseB low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.65 OHPLBJKB_02591 Flagellar basal-body rod protein FlgC 0.14 OHPLBJKB_01136 Sigma-E factor regulatory protein RseB low > 73
Escherichia coli Nissle 1917 0.65 ECOLIN_RS06220 flagellar basal body rod protein FlgC 0.14 ECOLIN_RS14550 sigma-E factor regulatory protein RseB low > 55
Escherichia coli ECOR38 0.65 HEPCGN_23820 flgC flagellar basal body rod protein FlgC 0.14 HEPCGN_20530 rseB sigma-E factor regulatory protein RseB low > 87
Escherichia coli BW25113 0.65 b1074 flgC flagellar basal-body rod protein C (NCBI) 0.14 b2571 rseB periplasmic negative regulator of sigmaE (NCBI) low > 76
Escherichia coli BL21 0.65 ECD_01070 flagellar component of cell-proximal portion of basal-body rod 0.14 ECD_02465 anti-sigma E factor, binds RseA — —
Herbaspirillum seropedicae SmR1 0.65 HSERO_RS10185 flagellar basal body rod protein FlgC 0.34 HSERO_RS09635 transcriptional regulator low > 78
Escherichia coli ECRC102 0.65 NIAGMN_24160 flgC flagellar basal body rod protein FlgC 0.14 NIAGMN_19155 rseB sigma-E factor regulatory protein RseB — —
Enterobacter sp. TBS_079 0.65 MPMX20_01753 Flagellar basal-body rod protein FlgC 0.13 MPMX20_03442 Sigma-E factor regulatory protein RseB low > 85
Enterobacter asburiae PDN3 0.64 EX28DRAFT_1858 flagellar basal-body rod protein FlgC 0.13 EX28DRAFT_0074 sigma E regulatory protein, MucB/RseB low > 76
Castellaniella sp019104865 MT123 0.60 ABCV34_RS05765 flagellar basal body rod protein FlgC 0.27 ABCV34_RS08345 MucB/RseB C-terminal domain-containing protein low > 48
Ralstonia solanacearum IBSBF1503 0.56 RALBFv3_RS21735 flagellar basal body rod protein FlgC 0.44 RALBFv3_RS14455 sugar dehydratase low > 76
Ralstonia solanacearum UW163 0.56 UW163_RS17450 flagellar basal body rod protein FlgC 0.44 UW163_RS11920 sugar dehydratase — —
Acidovorax sp. GW101-3H11 0.55 Ac3H11_1376 Flagellar basal-body rod protein FlgC 0.26 Ac3H11_1571 Sigma factor RpoE negative regulatory protein RseB precursor — —
Ralstonia sp. UNC404CL21Col 0.55 ABZR87_RS22285 flagellar basal body rod protein FlgC 0.44 ABZR87_RS10175 MucB/RseB C-terminal domain-containing protein low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.55 GFF1414 Flagellar basal-body rod protein FlgC 0.29 GFF3341 Sigma factor RpoE negative regulatory protein RseB precursor low > 90
Ralstonia solanacearum GMI1000 0.54 RS_RS18800 flagellar basal body rod protein FlgC 0.45 RS_RS05235 sugar dehydratase — —
Ralstonia solanacearum PSI07 0.54 RPSI07_RS01395 flagellar basal body rod protein FlgC 0.45 RPSI07_RS19005 sugar dehydratase low > 81
Pseudomonas syringae pv. syringae B728a 0.51 Psyr_3480 Flagellar basal-body rod protein FlgC 0.14 Psyr_3956 sigma E regulatory protein, MucB/RseB low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.51 Psyr_3480 Flagellar basal-body rod protein FlgC 0.14 Psyr_3956 sigma E regulatory protein, MucB/RseB low > 86
Pseudomonas sp. RS175 0.49 PFR28_03253 Flagellar basal-body rod protein FlgC 0.15 PFR28_00692 Sigma factor AlgU regulatory protein MucB 0.38 54
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_18920 flagellar basal-body rod protein FlgC 0.15 AO356_04565 RNA polymerase subunit sigma 0.69 47
Pseudomonas fluorescens FW300-N2E2 0.49 Pf6N2E2_5695 Flagellar basal-body rod protein FlgC 0.15 Pf6N2E2_2754 Sigma factor RpoE negative regulatory protein RseB precursor 0.46 73
Pseudomonas fluorescens FW300-N2E3 0.49 AO353_02855 flagellar basal-body rod protein FlgC 0.14 AO353_17635 RNA polymerase subunit sigma 0.53 53
Pseudomonas fluorescens GW456-L13 0.49 PfGW456L13_2002 Flagellar basal-body rod protein FlgC 0.14 PfGW456L13_4514 Sigma factor RpoE negative regulatory protein RseB precursor low > 87
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_3473 Flagellar basal-body rod protein FlgC 0.14 Pf1N1B4_3325 Sigma factor RpoE negative regulatory protein RseB precursor low > 87
Pseudomonas fluorescens SBW25 0.48 PFLU_RS23175 flagellar basal body rod protein FlgC 0.14 PFLU_RS07240 sigma factor AlgU regulatory protein MucB low > 109
Pseudomonas fluorescens SBW25-INTG 0.48 PFLU_RS23175 flagellar basal body rod protein FlgC 0.14 PFLU_RS07240 sigma factor AlgU regulatory protein MucB low > 109
Pseudomonas simiae WCS417 0.48 PS417_21565 flagellar basal body rod protein FlgC 0.14 PS417_07130 RNA polymerase sigma-H factor AlgU low > 88
Shewanella amazonensis SB2B 0.48 Sama_2317 flgC flagellar basal body rod protein FlgC (RefSeq) 0.10 Sama_0876 putative sigma E regulatory protein, MucB/RseB (RefSeq) low > 62
Pseudomonas putida KT2440 0.47 PP_4390 flagellar basal-body rod protein FlgC 0.15 PP_1429 Sigma factor AlgU regulatory protein MucB low > 96
Pseudomonas sp. S08-1 0.47 OH686_02970 flagellar basal-body rod protein FlgC 0.14 OH686_20055 Sigma factor RpoE negative regulatory protein RseB precursor — —
Shewanella loihica PV-4 0.47 Shew_1346 flgC flagellar basal body rod protein FlgC (RefSeq) 0.12 Shew_1050 sigma E regulatory protein, MucB/RseB (RefSeq) — —
Marinobacter adhaerens HP15 0.44 HP15_1468 flagellar basal-body rod protein FlgC-like protein 0.17 HP15_777 sigma E regulatory protein, MucB/RseB — —
Shewanella sp. ANA-3 0.43 Shewana3_1322 flgC flagellar basal body rod protein FlgC (RefSeq) 0.12 Shewana3_3030 sigma E regulatory protein, MucB/RseB (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.43 CSW01_11220 flagellar basal body rod protein FlgC 0.14 CSW01_12475 sigma-E factor regulatory protein RseB — —
Pseudomonas stutzeri RCH2 0.42 Psest_2967 flagellar basal-body rod protein FlgC 0.12 Psest_3098 Negative regulator of sigma E activity — —
Shewanella oneidensis MR-1 0.42 SO3249 flgC flagellar basal-body rod protein FlgC (NCBI ptt file) 0.12 SO1344 rseB sigma-E factor regulatory protein RseB (NCBI ptt file) low > 76

Not shown: 25 genomes with orthologs for QEN71_RS28915 only; 2 genomes with orthologs for QEN71_RS04585 only