| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Paraburkholderia sabiae LMG 24235 | 1.0 | QEN71_RS27790 | | Nif3-like dinuclear metal center hexameric protein | 1.0 | QEN71_RS04575 | | RNA polymerase sigma factor RpoE | 0.52 | 15 |
| Paraburkholderia graminis OAS925 | 0.81 | ABIE53_003686 | | dinuclear metal center YbgI/SA1388 family protein | 0.99 | ABIE53_003043 | | RNA polymerase sigma-70 factor (ECF subfamily) | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.80 | H281DRAFT_05668 | | dinuclear metal center protein, YbgI/SA1388 family | 0.99 | H281DRAFT_04355 | | RNA polymerase, sigma-24 subunit, RpoE | — | — |
| Burkholderia phytofirmans PsJN | 0.79 | BPHYT_RS17635 | | metal-binding protein | 0.99 | BPHYT_RS14405 | | RNA polymerase sigma factor RpoE | — | — |
| Ralstonia sp. UNC404CL21Col | 0.65 | ABZR87_RS02395 | | Nif3-like dinuclear metal center hexameric protein | 0.85 | ABZR87_RS10165 | | RNA polymerase sigma factor RpoE | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.65 | RPSI07_RS10495 | | Nif3-like dinuclear metal center hexameric protein | 0.86 | RPSI07_RS19015 | | RNA polymerase sigma factor RpoE | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.64 | RS_RS14685 | | Nif3-like dinuclear metal center hexameric protein | 0.86 | RS_RS05225 | | RNA polymerase sigma factor RpoE | low | > 80 |
| Ralstonia solanacearum UW163 | 0.64 | UW163_RS06875 | | Nif3-like dinuclear metal center hexameric protein | 0.86 | UW163_RS11910 | | RNA polymerase sigma factor RpoE | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.64 | RALBFv3_RS06740 | | Nif3-like dinuclear metal center hexameric protein | 0.86 | RALBFv3_RS14445 | | RNA polymerase sigma factor RpoE | low | > 76 |
| Cupriavidus basilensis FW507-4G11 | 0.64 | RR42_RS18835 | | Nif3-like dinuclear metal center hexameric protein | 0.86 | RR42_RS14080 | | RNA polymerase sigma factor RpoE | low | > 128 |
| Herbaspirillum seropedicae SmR1 | 0.58 | HSERO_RS20255 | | metal-binding protein | 0.83 | HSERO_RS09625 | | RNA polymerase sigma factor RpoE | — | — |
| Castellaniella sp019104865 MT123 | 0.55 | ABCV34_RS12645 | | Nif3-like dinuclear metal center hexameric protein | 0.69 | ABCV34_RS08355 | | RNA polymerase sigma factor RpoE | 0.32 | 36 |
| Dechlorosoma suillum PS | 0.54 | Dsui_1427 | | dinuclear metal center protein, YbgI/SA1388 family | 0.82 | Dsui_2453 | | RNA polymerase sigma factor RpoE | — | — |
| Pseudomonas putida KT2440 | 0.52 | PP_1302 | | putative metal-binding hydrolase-oxidase enzyme | 0.58 | PP_1427 | | RNA polymerase sigma E factor | low | > 96 |
| Shewanella sp. ANA-3 | 0.52 | Shewana3_1758 | | hypothetical protein (RefSeq) | 0.62 | Shewana3_3032 | | RNA polymerase sigma factor RpoE (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.52 | SO2621 | | conserved hypothetical protein TIGR00486 (NCBI ptt file) | 0.62 | SO1342 | rpoE | RNA polymerase sigma-24 factor (NCBI ptt file) | — | — |
| Pseudomonas stutzeri RCH2 | 0.51 | Psest_3295 | | dinuclear metal center protein, YbgI/SA1388 family | 0.59 | Psest_3100 | | RNA polymerase sigma factor RpoE | low | > 67 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.51 | GFF1298 | | FIG137478: Hypothetical protein YbgI | 0.54 | GFF3339 | | RNA polymerase sigma factor RpoE | low | > 90 |
| Pseudomonas fluorescens FW300-N2E3 | 0.51 | AO353_05085 | | metal-binding protein | 0.58 | AO353_17625 | | RNA polymerase subunit sigma | low | > 101 |
| Pseudomonas fluorescens FW300-N2E2 | 0.51 | Pf6N2E2_5256 | | FIG137478: Hypothetical protein YbgI | 0.58 | Pf6N2E2_2756 | | RNA polymerase sigma-H factor AlgT | low | > 103 |
| Shewanella loihica PV-4 | 0.51 | Shew_1572 | | hypothetical protein (RefSeq) | 0.62 | Shew_1048 | | RNA polymerase sigma factor RpoE (RefSeq) | — | — |
| Pseudomonas sp. RS175 | 0.51 | PFR28_00192 | | GTP cyclohydrolase 1 type 2 | 0.58 | PFR28_00690 | | RNA polymerase sigma-H factor | low | > 88 |
| Pseudomonas sp. S08-1 | 0.51 | OH686_08455 | | GTP cyclohydrolase 1 type 2-related YbgI | 0.58 | OH686_20045 | | RNA polymerase sigma factor RpoE | low | > 80 |
| Pseudomonas fluorescens FW300-N2C3 | 0.51 | AO356_16660 | | metal-binding protein | 0.58 | AO356_04575 | | RNA polymerase subunit sigma | low | > 104 |
| Alteromonas macleodii MIT1002 | 0.51 | MIT1002_01972 | | metal-binding protein | 0.61 | MIT1002_02719 | | Sigma-24 | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.50 | PfGW456L13_4997 | | FIG137478: Hypothetical protein YbgI | 0.58 | PfGW456L13_4516 | | RNA polymerase sigma-H factor AlgT | low | > 87 |
| Pseudomonas simiae WCS417 | 0.50 | PS417_03710 | | metal-binding protein | 0.58 | PS417_07120 | | RNA polymerase sigma-H factor | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.49 | PFLU_RS03760 | | Nif3-like dinuclear metal center hexameric protein | 0.58 | PFLU_RS07230 | | RNA polymerase sigma factor RpoE | low | > 109 |
| Shewanella amazonensis SB2B | 0.49 | Sama_2050 | | hypothetical protein (RefSeq) | 0.57 | Sama_0874 | | RNA polymerase sigma factor RpoE (RefSeq) | low | > 62 |
| Pseudomonas fluorescens SBW25 | 0.49 | PFLU_RS03760 | | Nif3-like dinuclear metal center hexameric protein | 0.58 | PFLU_RS07230 | | RNA polymerase sigma factor RpoE | low | > 109 |
| Pseudomonas syringae pv. syringae B728a | 0.49 | Psyr_4129 | | Protein of unknown function DUF34 | 0.58 | Psyr_3958 | | RNA polymerase, sigma-24 subunit, RpoE | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.49 | Psyr_4129 | | Protein of unknown function DUF34 | 0.58 | Psyr_3958 | | RNA polymerase, sigma-24 subunit, RpoE | low | > 86 |
| Rahnella sp. WP5 | 0.48 | EX31_RS23375 | | type 2 GTP cyclohydrolase I | 0.58 | EX31_RS21800 | | RNA polymerase sigma factor RpoE | — | — |
| Serratia liquefaciens MT49 | 0.48 | IAI46_06210 | | type 2 GTP cyclohydrolase I | 0.58 | IAI46_19585 | | RNA polymerase sigma factor RpoE | — | — |
| Erwinia tracheiphila SCR3 | 0.48 | LU632_RS16150 | | type 2 GTP cyclohydrolase I | 0.58 | LU632_RS15425 | rpoE | RNA polymerase sigma factor RpoE | low | > 74 |
| Enterobacter sp. TBS_079 | 0.48 | MPMX20_01344 | | GTP cyclohydrolase 1 type 2 | 0.58 | MPMX20_03444 | | ECF RNA polymerase sigma-E factor | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.48 | CSW01_10460 | | Nif3-like dinuclear metal center hexameric protein | 0.62 | CSW01_12485 | | RNA polymerase sigma factor RpoE | — | — |
| Pectobacterium carotovorum WPP14 | 0.47 | HER17_RS14990 | | type 2 GTP cyclohydrolase I | 0.57 | HER17_RS05780 | | RNA polymerase sigma factor RpoE | — | — |
| Enterobacter asburiae PDN3 | 0.47 | EX28DRAFT_2277 | | dinuclear metal center protein, YbgI/SA1388 family | 0.58 | EX28DRAFT_0072 | | RNA polymerase sigma factor RpoE | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.47 | GFF4615 | | FIG137478: Hypothetical protein YbgI | 0.58 | GFF2107 | | RNA polymerase sigma factor RpoE | — | — |
| Escherichia coli ECOR27 | 0.47 | NOLOHH_23395 | ybgI | radiation resistance protein YbgI | 0.58 | NOLOHH_13050 | rpoE | RNA polymerase sigma factor RpoE | — | — |
| Escherichia coli ECRC98 | 0.47 | JDDGAC_10665 | ybgI | radiation resistance protein YbgI | 0.58 | JDDGAC_25040 | rpoE | RNA polymerase sigma factor RpoE | — | — |
| Escherichia coli ECRC62 | 0.47 | BNILDI_21390 | ybgI | radiation resistance protein YbgI | 0.58 | BNILDI_11850 | rpoE | RNA polymerase sigma factor RpoE | — | — |
| Escherichia coli ECRC102 | 0.47 | NIAGMN_05065 | ybgI | radiation resistance protein YbgI | 0.58 | NIAGMN_19145 | rpoE | RNA polymerase sigma factor RpoE | — | — |
| Escherichia coli ECRC99 | 0.47 | KEDOAH_20955 | ybgI | radiation resistance protein YbgI | 0.58 | KEDOAH_06845 | rpoE | RNA polymerase sigma factor RpoE | — | — |
| Escherichia coli ECOR38 | 0.47 | HEPCGN_01200 | ybgI | radiation resistance protein YbgI | 0.58 | HEPCGN_20520 | rpoE | RNA polymerase sigma factor RpoE | — | — |
| Escherichia coli ECRC100 | 0.47 | OKFHMN_07010 | ybgI | radiation resistance protein YbgI | 0.58 | OKFHMN_21375 | rpoE | RNA polymerase sigma factor RpoE | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.47 | OHPLBJKB_03007 | | GTP cyclohydrolase 1 type 2 | 0.58 | OHPLBJKB_01134 | | ECF RNA polymerase sigma-E factor | — | — |
| Escherichia fergusonii Becca | 0.47 | EFB2_03393 | | GTP cyclohydrolase 1 type 2 | 0.58 | EFB2_01323 | | ECF RNA polymerase sigma-E factor | — | — |
| Escherichia coli Nissle 1917 | 0.47 | ECOLIN_RS03800 | | radiation resistance protein YbgI | 0.58 | ECOLIN_RS14560 | | RNA polymerase sigma factor RpoE | — | — |
| Escherichia coli ECRC101 | 0.47 | MCAODC_26230 | ybgI | radiation resistance protein YbgI | 0.58 | MCAODC_11905 | rpoE | RNA polymerase sigma factor RpoE | — | — |
| Escherichia coli BW25113 | 0.47 | b0710 | ybgI | conserved metal-binding protein (NCBI) | 0.58 | b2573 | rpoE | RNA polymerase, sigma 24 (sigma E) factor (NCBI) | — | — |
| Escherichia coli BL21 | 0.47 | ECD_00670 | | NIF3 family metal-binding protein | 0.58 | ECD_02467 | | RNA polymerase sigma E factor | — | — |
| Klebsiella michiganensis M5al | 0.46 | BWI76_RS08345 | | Nif3-like dinuclear metal center protein | 0.58 | BWI76_RS21355 | | RNA polymerase sigma factor RpoE | — | — |
| Variovorax sp. SCN45 | 0.46 | GFF5367 | | GTP cyclohydrolase 1 type 2 homolog YbgI | 0.57 | GFF3863 | | RNA polymerase sigma factor RpoE | low | > 127 |
| Pantoea sp. MT58 | 0.45 | IAI47_13810 | | type 2 GTP cyclohydrolase I | 0.58 | IAI47_04850 | | RNA polymerase sigma factor RpoE | — | — |
| Dickeya dadantii 3937 | 0.45 | DDA3937_RS06410 | | type 2 GTP cyclohydrolase I | 0.59 | DDA3937_RS15765 | | RNA polymerase sigma factor RpoE | low | > 74 |
| Acidovorax sp. GW101-3H11 | 0.44 | Ac3H11_4745 | | FIG137478: Hypothetical protein YbgI | 0.57 | Ac3H11_1573 | | RNA polymerase sigma factor RpoE | — | — |
| Dickeya dianthicola ME23 | 0.43 | DZA65_RS06800 | | type 2 GTP cyclohydrolase I | 0.58 | DZA65_RS16930 | | RNA polymerase sigma factor RpoE | low | > 75 |
| Dickeya dianthicola 67-19 | 0.43 | HGI48_RS06455 | | type 2 GTP cyclohydrolase I | 0.58 | HGI48_RS15850 | | RNA polymerase sigma factor RpoE | low | > 71 |
| Variovorax sp. OAS795 | 0.43 | ABID97_RS23060 | | Nif3-like dinuclear metal center hexameric protein | 0.57 | ABID97_RS08330 | | RNA polymerase sigma factor RpoE | low | > 91 |
Not shown: 5 genomes with orthologs for QEN71_RS27790 only; 22 genomes with orthologs for QEN71_RS04575 only