Conservation of cofitness between Psyr_1337 and Psyr_4852 in Pseudomonas syringae pv. syringae B728a

72 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_1337 Conserved hypothetical protein ArsC related protein 1.0 Psyr_4852 D-3-phosphoglycerate dehydrogenase 0.57 10
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_1337 Conserved hypothetical protein ArsC related protein 1.00 Psyr_4852 D-3-phosphoglycerate dehydrogenase low > 86
Pseudomonas lactucae CFBP13502 0.89 GEMAOFIL_01407 Protein YffB 0.95 GEMAOFIL_05548 D-3-phosphoglycerate dehydrogenase low > 93
Pseudomonas fluorescens FW300-N1B4 0.88 Pf1N1B4_3078 FIG138056: a glutathione-dependent thiol reductase 0.94 Pf1N1B4_2272 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 87
Pseudomonas simiae WCS417 0.88 PS417_06185 ArsC family transcriptional regulator 0.95 PS417_27040 3-phosphoglycerate dehydrogenase — —
Pseudomonas sp. DMC3 0.88 GFF2048 Protein YffB 0.94 GFF274 D-3-phosphoglycerate dehydrogenase — —
Pseudomonas fluorescens SBW25-INTG 0.88 PFLU_RS06250 ArsC family reductase 0.95 PFLU_RS28695 phosphoglycerate dehydrogenase low > 109
Pseudomonas fluorescens SBW25 0.88 PFLU_RS06250 ArsC family reductase 0.95 PFLU_RS28695 phosphoglycerate dehydrogenase low > 109
Pseudomonas fluorescens FW300-N2E3 0.87 AO353_16440 ArsC family transcriptional regulator 0.94 AO353_08510 3-phosphoglycerate dehydrogenase 0.28 83
Pseudomonas sp. RS175 0.87 PFR28_00391 hypothetical protein 0.94 PFR28_04842 D-3-phosphoglycerate dehydrogenase low > 88
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_4715 FIG138056: a glutathione-dependent thiol reductase 0.94 PfGW456L13_943 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.38 75
Pseudomonas fluorescens FW300-N2E2 0.86 Pf6N2E2_3077 FIG138056: a glutathione-dependent thiol reductase 0.95 Pf6N2E2_3932 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 103
Pseudomonas fluorescens FW300-N2C3 0.86 AO356_06065 ArsC family transcriptional regulator 0.94 AO356_10300 3-phosphoglycerate dehydrogenase low > 104
Pseudomonas putida KT2440 0.86 PP_1531 putative glutathione-dependent thiol reductase 0.93 PP_5155 D-3-phosphoglycerate dehydrogenase / alpha-ketoglutarate reductase — —
Pseudomonas aeruginosa PA14 0.85 IKLFDK_18710 ArsC family reductase 0.90 IKLFDK_23865 phosphoglycerate dehydrogenase — —
Pseudomonas sp. BP01 0.85 JOY50_RS26165 ArsC family reductase 0.94 JOY50_RS20615 serA phosphoglycerate dehydrogenase low > 84
Pseudomonas stutzeri RCH2 0.84 Psest_1466 transcriptional regulator, Spx/MgsR family 0.89 Psest_3873 Phosphoglycerate dehydrogenase and related dehydrogenases — —
Pseudomonas sp. S08-1 0.84 OH686_06505 a glutathione-dependent thiol reductase 0.90 OH686_11280 D-3-phosphoglycerate dehydrogenase low > 80
Pseudomonas segetis P6 0.84 MPMX49_03466 Protein YffB 0.89 MPMX49_00575 D-3-phosphoglycerate dehydrogenase — —
Pseudomonas sp. SVBP6 0.83 COO64_RS19615 ArsC family reductase 0.95 COO64_RS12640 serA phosphoglycerate dehydrogenase low > 93
Rhizobium sp. OAE497 0.69 ABIE40_RS01235 ArsC family reductase 0.59 ABIE40_RS30040 phosphoglycerate dehydrogenase low > 107
Bosea sp. OAE506 0.68 ABIE41_RS18295 ArsC family reductase 0.55 ABIE41_RS08410 phosphoglycerate dehydrogenase low > 77
Xanthobacter sp. DMC5 0.65 GFF1300 Protein YffB 0.56 GFF4356 D-3-phosphoglycerate dehydrogenase — —
Shewanella sp. ANA-3 0.54 Shewana3_1913 arsenate reductase and related (RefSeq) 0.69 Shewana3_3416 D-3-phosphoglycerate dehydrogenase (RefSeq) — —
Shewanella oneidensis MR-1 0.50 SO2470 conserved hypothetical protein (NCBI ptt file) 0.69 SO0862 serA D-3-phosphoglycerate dehydrogenase (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.50 CSW01_10730 ArsC family reductase 0.64 CSW01_12555 phosphoglycerate dehydrogenase low > 62
Variovorax sp. SCN45 0.50 GFF3093 FIG138056: a glutathione-dependent thiol reductase 0.78 GFF2538 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 127
Shewanella loihica PV-4 0.48 Shew_1863 arsenate reductase and related (RefSeq) 0.69 Shew_3196 D-3-phosphoglycerate dehydrogenase (RefSeq) — —
Shewanella amazonensis SB2B 0.48 Sama_1648 hypothetical protein (RefSeq) 0.69 Sama_2949 D-3-phosphoglycerate dehydrogenase (RefSeq) — —
Marinobacter adhaerens HP15 0.48 HP15_1161 arsenate reductase 0.77 HP15_2554 D-3-phosphoglycerate dehydrogenase-like protein — —
Serratia liquefaciens MT49 0.48 IAI46_18735 ArsC family reductase 0.67 IAI46_20900 phosphoglycerate dehydrogenase — —
Variovorax sp. OAS795 0.47 ABID97_RS21655 ArsC family reductase 0.80 ABID97_RS07235 phosphoglycerate dehydrogenase low > 91
Alteromonas macleodii MIT1002 0.46 MIT1002_01546 Regulatory protein spx 0.68 MIT1002_02993 D-3-phosphoglycerate dehydrogenase low > 70
Dickeya dianthicola ME23 0.45 DZA65_RS06505 ArsC family reductase 0.65 DZA65_RS19540 phosphoglycerate dehydrogenase low > 75
Dickeya dianthicola 67-19 0.45 HGI48_RS06155 ArsC family reductase 0.65 HGI48_RS18400 phosphoglycerate dehydrogenase low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.44 GFF2187 FIG138056: a glutathione-dependent thiol reductase 0.67 GFF3013 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) — —
Dickeya dadantii 3937 0.44 DDA3937_RS06110 ArsC family reductase 0.65 DDA3937_RS18480 phosphoglycerate dehydrogenase 0.57 66
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS11945 ArsC family transcriptional regulator 0.47 RR42_RS27010 D-3-phosphoglycerate dehydrogenase — —
Klebsiella pneumoniae MKP103 0.43 KDGMDA_27705 ArsC family reductase 0.68 KDGMDA_04420 phosphoglycerate dehydrogenase low > 95
Acidovorax sp. GW101-3H11 0.43 Ac3H11_2613 FIG138056: a glutathione-dependent thiol reductase 0.79 Ac3H11_4790 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 79
Pectobacterium carotovorum WPP14 0.43 HER17_RS15305 ArsC family reductase 0.65 HER17_RS02725 phosphoglycerate dehydrogenase low > 75
Escherichia coli BL21 0.43 ECD_02362 putative ArsC family reductase 0.67 ECD_02744 D-3-phosphoglycerate dehydrogenase — —
Escherichia coli BW25113 0.43 b2471 yffB hypothetical protein (NCBI) 0.67 b2913 serA D-3-phosphoglycerate dehydrogenase (NCBI) low > 76
Enterobacter asburiae PDN3 0.43 EX28DRAFT_0190 transcriptional regulator, Spx/MgsR family 0.67 EX28DRAFT_2965 Phosphoglycerate dehydrogenase and related dehydrogenases — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.42 OHPLBJKB_01260 Protein YffB 0.67 OHPLBJKB_00803 D-3-phosphoglycerate dehydrogenase low > 74
Klebsiella michiganensis M5al 0.42 BWI76_RS20865 arsenate reductase 0.68 BWI76_RS23920 D-3-phosphoglycerate dehydrogenase low > 92
Escherichia coli ECOR27 0.42 NOLOHH_13640 arsC ArsC family reductase 0.67 NOLOHH_11370 serA phosphoglycerate dehydrogenase low > 76
Escherichia coli ECRC62 0.42 BNILDI_12450 arsC ArsC family reductase 0.67 BNILDI_09905 serA phosphoglycerate dehydrogenase low > 75
Enterobacter sp. TBS_079 0.42 MPMX20_03332 Protein YffB 0.67 MPMX20_03771 D-3-phosphoglycerate dehydrogenase low > 85
Escherichia coli Nissle 1917 0.42 ECOLIN_RS14100 ArsC family reductase 0.67 ECOLIN_RS16210 phosphoglycerate dehydrogenase — —
Escherichia fergusonii Becca 0.42 EFB2_01417 Protein YffB 0.67 EFB2_00990 D-3-phosphoglycerate dehydrogenase low > 86
Erwinia amylovora T8 0.42 OLJFJH_10730 ArsC family reductase 0.67 OLJFJH_08735 phosphoglycerate dehydrogenase low > 58
Escherichia coli ECOR38 0.42 HEPCGN_21130 arsC ArsC family reductase 0.67 HEPCGN_18760 serA phosphoglycerate dehydrogenase low > 88
Escherichia coli ECRC100 0.42 OKFHMN_21960 yffB ArsC family reductase 0.67 OKFHMN_19460 serA phosphoglycerate dehydrogenase low > 79
Escherichia coli ECRC101 0.42 MCAODC_12490 yffB ArsC family reductase 0.67 MCAODC_09980 serA phosphoglycerate dehydrogenase low > 88
Escherichia coli ECRC98 0.42 JDDGAC_25905 yffB ArsC family reductase 0.67 JDDGAC_23100 serA phosphoglycerate dehydrogenase low > 87
Escherichia coli ECRC102 0.42 NIAGMN_19730 yffB ArsC family reductase 0.67 NIAGMN_17225 serA phosphoglycerate dehydrogenase low > 80
Rahnella sp. WP5 0.41 EX31_RS22800 ArsC family reductase 0.66 EX31_RS21470 phosphoglycerate dehydrogenase low > 89
Escherichia coli ECRC99 0.41 KEDOAH_06260 arsC ArsC family reductase 0.67 KEDOAH_08680 serA phosphoglycerate dehydrogenase — —
Pantoea agglomerans CFBP13505 P0401 0.40 PagCFBP13505_RS19850 ArsC family reductase 0.65 PagCFBP13505_RS15975 phosphoglycerate dehydrogenase low > 74
Acinetobacter baumannii LAC-4 0.39 RR41_RS00790 arsenate reductase 0.68 RR41_RS01765 phosphoglycerate dehydrogenase low > 55
Erwinia tracheiphila SCR3 0.39 LU632_RS08360 ArsC family reductase 0.67 LU632_RS05855 serA phosphoglycerate dehydrogenase low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF296 FIG138056: a glutathione-dependent thiol reductase 0.75 GFF149 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) — —
Kangiella aquimarina DSM 16071 0.39 B158DRAFT_1070 transcriptional regulator, Spx/MgsR family 0.65 B158DRAFT_0518 Phosphoglycerate dehydrogenase and related dehydrogenases low > 40
Pantoea sp. MT58 0.39 IAI47_05305 ArsC family reductase 0.66 IAI47_03725 phosphoglycerate dehydrogenase low > 76
Acinetobacter radioresistens SK82 0.34 MPMX26_02939 Protein YffB 0.69 MPMX26_02773 D-3-phosphoglycerate dehydrogenase low > 36
Dyella japonica UNC79MFTsu3.2 0.30 ABZR86_RS21560 Spx/MgsR family RNA polymerase-binding regulatory protein 0.68 ABZR86_RS09635 phosphoglycerate dehydrogenase 0.30 72
Lysobacter sp. OAE881 0.29 ABIE51_RS06990 Spx/MgsR family RNA polymerase-binding regulatory protein 0.62 ABIE51_RS13245 phosphoglycerate dehydrogenase low > 62
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS14260 Spx/MgsR family RNA polymerase-binding regulatory protein 0.67 LRK54_RS03185 phosphoglycerate dehydrogenase low > 59
Rhodanobacter denitrificans MT42 0.29 LRK55_RS13980 Spx/MgsR family RNA polymerase-binding regulatory protein 0.67 LRK55_RS02935 phosphoglycerate dehydrogenase low > 63
Xanthomonas campestris pv. campestris strain 8004 0.29 Xcc-8004.3540.1 FIG138056: a glutathione-dependent thiol reductase 0.65 Xcc-8004.2931.1 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) — —
Rhodanobacter sp000427505 FW510-R12 0.29 LRK53_RS14350 Spx/MgsR family RNA polymerase-binding regulatory protein 0.66 LRK53_RS06795 phosphoglycerate dehydrogenase low > 59
Rhodanobacter sp. FW510-T8 0.28 OKGIIK_03130 Arsenate reductase 0.66 OKGIIK_10055 serA phosphoglycerate dehydrogenase low > 53

Not shown: 27 genomes with orthologs for Psyr_1337 only; 6 genomes with orthologs for Psyr_4852 only