Conservation of cofitness between Psyr_0168 and Psyr_1668 in Pseudomonas syringae pv. syringae B728a

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_0168 Phosphoenolpyruvate carboxykinase (ATP) 1.0 Psyr_1668 amidophosphoribosyltransferase 0.60 18
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0168 Phosphoenolpyruvate carboxykinase (ATP) 1.00 Psyr_1668 amidophosphoribosyltransferase 0.52 50
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_10140 phosphoenolpyruvate carboxykinase [ATP] 0.95 AO356_21465 amidophosphoribosyltransferase 0.44 29
Pseudomonas fluorescens FW300-N2E2 0.92 Pf6N2E2_3899 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) 0.95 Pf6N2E2_76 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Pseudomonas lactucae CFBP13502 0.86 GEMAOFIL_00469 Phosphoenolpyruvate carboxykinase (ATP) 0.95 GEMAOFIL_03935 Amidophosphoribosyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.86 PFLU_RS01320 phosphoenolpyruvate carboxykinase 0.95 PFLU_RS20515 amidophosphoribosyltransferase low > 109
Pseudomonas fluorescens SBW25 0.86 PFLU_RS01320 phosphoenolpyruvate carboxykinase 0.95 PFLU_RS20515 amidophosphoribosyltransferase low > 109
Pseudomonas simiae WCS417 0.85 PS417_01210 hypothetical protein 0.95 PS417_18535 amidophosphoribosyltransferase — —
Pseudomonas sp. RS175 0.85 PFR28_04874 Phosphoenolpyruvate carboxykinase (ATP) 0.95 PFR28_02811 Amidophosphoribosyltransferase low > 88
Pseudomonas fluorescens GW456-L13 0.85 PfGW456L13_420 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) 0.95 PfGW456L13_3935 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Pseudomonas fluorescens FW300-N2E3 0.85 AO353_11775 phosphoenolpyruvate carboxykinase [ATP] 0.95 AO353_20690 amidophosphoribosyltransferase — —
Pseudomonas sp. DMC3 0.85 GFF4175 Phosphoenolpyruvate carboxykinase (ATP) 0.95 GFF798 Amidophosphoribosyltransferase low > 89
Pseudomonas sp. SVBP6 0.84 COO64_RS00660 phosphoenolpyruvate carboxykinase 0.94 COO64_RS05600 purF amidophosphoribosyltransferase 0.77 3
Pseudomonas sp. BP01 0.84 JOY50_RS18315 phosphoenolpyruvate carboxykinase 0.91 JOY50_RS16565 purF amidophosphoribosyltransferase — —
Pseudomonas stutzeri RCH2 0.82 Psest_3988 phosphoenolpyruvate carboxykinase (ATP) 0.92 Psest_2579 amidophosphoribosyltransferase 0.42 9
Pseudomonas segetis P6 0.82 MPMX49_00777 Phosphoenolpyruvate carboxykinase (ATP) 0.93 MPMX49_03061 Amidophosphoribosyltransferase — —
Pseudomonas aeruginosa PA14 0.81 IKLFDK_27515 phosphoenolpyruvate carboxykinase 0.91 IKLFDK_15815 amidophosphoribosyltransferase 0.54 39
Pseudomonas sp. S08-1 0.80 OH686_11060 phosphoenolpyruvate carboxykinase (ATP) 0.92 OH686_04420 amidophosphoribosyltransferase — —
Marinobacter adhaerens HP15 0.73 HP15_3498 phosphoenolpyruvate carboxykinase (ATP) 0.75 HP15_1821 amidophosphoribosyltransferase — —
Alteromonas macleodii MIT1002 0.69 MIT1002_03972 Phosphoenolpyruvate carboxykinase [ATP] 0.64 MIT1002_02524 Amidophosphoribosyltransferase low > 70
Shewanella loihica PV-4 0.68 Shew_3623 phosphoenolpyruvate carboxykinase (RefSeq) 0.62 Shew_2302 amidophosphoribosyltransferase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.68 Sama_0165 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (from data) 0.62 Sama_2146 amidophosphoribosyltransferase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.67 SO0162 pckA phosphoenolpyruvate carboxykinase (ATP) (NCBI ptt file) 0.63 SO3064 purF amidophosphoribosyltransferase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.66 Shewana3_0147 phosphoenolpyruvate carboxykinase (RefSeq) 0.63 Shewana3_1483 amidophosphoribosyltransferase (RefSeq) low > 73
Fusobacterium nucleatum SB010 0.46 HUW76_06485 phosphoenolpyruvate carboxykinase (ATP) 0.24 HUW76_05170 amidophosphoribosyltransferase low > 35
Sphingobium sp. HT1-2 0.43 GFF3825 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) 0.27 GFF79 Amidophosphoribosyltransferase (EC 2.4.2.14) low > 95
Agrobacterium fabrum C58 0.42 Atu0035 phosphoenolpyruvate carboxykinase 0.27 Atu1075 amidophosphoribosyltransferase 0.45 45
Xanthobacter sp. DMC5 0.42 GFF4136 Phosphoenolpyruvate carboxykinase (ATP) 0.26 GFF1872 Amidophosphoribosyltransferase — —
Dinoroseobacter shibae DFL-12 0.42 Dshi_0213 Phosphoenolpyruvate carboxykinase (ATP) (RefSeq) 0.27 Dshi_2132 amidophosphoribosyltransferase (RefSeq) 0.63 14
Rhodopseudomonas palustris CGA009 0.41 TX73_001865 phosphoenolpyruvate carboxykinase 0.28 TX73_015990 amidophosphoribosyltransferase — —
Bosea sp. OAE506 0.41 ABIE41_RS02665 phosphoenolpyruvate carboxykinase 0.27 ABIE41_RS17810 amidophosphoribosyltransferase low > 77
Sinorhizobium meliloti 1021 0.41 SMc02562 phosphoenolpyruvate carboxykinase 0.26 SMc00554 amidophosphoribosyltransferase 0.36 99
Rhizobium sp. OAE497 0.41 ABIE40_RS19415 phosphoenolpyruvate carboxykinase 0.27 ABIE40_RS06270 amidophosphoribosyltransferase low > 107
Phaeobacter inhibens DSM 17395 0.40 PGA1_c01140 phosphoenolpyruvate carboxykinase 0.27 PGA1_c10810 amidophosphoribosyltransferase PurF 0.72 12
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_0913 phosphoenolpyruvate carboxykinase (ATP) 0.25 Ga0059261_3626 amidophosphoribosyltransferase (EC 2.4.2.14) — —
Escherichia coli ECOR38 0.37 HEPCGN_15865 pckA phosphoenolpyruvate carboxykinase (ATP) 0.62 HEPCGN_21910 purF amidophosphoribosyltransferase 0.33 81
Escherichia coli ECRC62 0.37 BNILDI_02685 pckA phosphoenolpyruvate carboxykinase (ATP) 0.62 BNILDI_13255 purF amidophosphoribosyltransferase low > 75
Escherichia coli Nissle 1917 0.37 ECOLIN_RS19435 phosphoenolpyruvate carboxykinase (ATP) 0.62 ECOLIN_RS13405 amidophosphoribosyltransferase — —
Escherichia coli BL21 0.37 ECD_03255 phosphoenolpyruvate carboxykinase [ATP] 0.62 ECD_02237 amidophosphoribosyltransferase 0.49 7
Escherichia fergusonii Becca 0.37 EFB2_00425 Phosphoenolpyruvate carboxykinase (ATP) 0.62 EFB2_01546 Amidophosphoribosyltransferase low > 86
Escherichia coli ECOR27 0.37 NOLOHH_08835 pckA phosphoenolpyruvate carboxykinase (ATP) 0.62 NOLOHH_14335 purF amidophosphoribosyltransferase low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.37 OHPLBJKB_00300 Phosphoenolpyruvate carboxykinase (ATP) 0.62 OHPLBJKB_01393 Amidophosphoribosyltransferase low > 74
Escherichia coli BW25113 0.37 b3403 pck phosphoenolpyruvate carboxykinase (NCBI) 0.62 b2312 purF amidophosphoribosyltransferase (NCBI) low > 76
Escherichia coli ECRC102 0.37 NIAGMN_14815 pckA phosphoenolpyruvate carboxykinase (ATP) 0.62 NIAGMN_20485 purF amidophosphoribosyltransferase low > 80
Escherichia coli ECRC99 0.37 KEDOAH_11095 pckA phosphoenolpyruvate carboxykinase (ATP) 0.62 KEDOAH_05480 purF amidophosphoribosyltransferase — —
Escherichia coli ECRC101 0.37 MCAODC_07575 pckA phosphoenolpyruvate carboxykinase (ATP) 0.62 MCAODC_13755 purF amidophosphoribosyltransferase low > 88
Escherichia coli ECRC100 0.37 OKFHMN_17045 pckA phosphoenolpyruvate carboxykinase (ATP) 0.62 OKFHMN_22715 purF amidophosphoribosyltransferase low > 79
Escherichia coli ECRC98 0.37 JDDGAC_20675 pckA phosphoenolpyruvate carboxykinase (ATP) 0.62 JDDGAC_26675 purF amidophosphoribosyltransferase low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.37 GFF615 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) 0.62 GFF1927 Amidophosphoribosyltransferase (EC 2.4.2.14) low > 78
Klebsiella michiganensis M5al 0.37 BWI76_RS26155 phosphoenolpyruvate carboxykinase (ATP) 0.62 BWI76_RS20350 amidophosphoribosyltransferase low > 92
Kangiella aquimarina DSM 16071 0.37 B158DRAFT_2395 phosphoenolpyruvate carboxykinase (ATP) 0.70 B158DRAFT_1488 amidophosphoribosyltransferase (EC 2.4.2.14) — —
Serratia liquefaciens MT49 0.37 IAI46_10700 phosphoenolpyruvate carboxykinase (ATP) 0.63 IAI46_17810 amidophosphoribosyltransferase low > 86
Klebsiella pneumoniae MKP103 0.37 KDGMDA_06970 phosphoenolpyruvate carboxykinase (ATP) 0.62 KDGMDA_27185 amidophosphoribosyltransferase low > 95
Enterobacter sp. TBS_079 0.37 MPMX20_04290 Phosphoenolpyruvate carboxykinase (ATP) 0.62 MPMX20_03247 Amidophosphoribosyltransferase low > 85
Enterobacter asburiae PDN3 0.37 EX28DRAFT_4140 phosphoenolpyruvate carboxykinase (ATP) 0.62 EX28DRAFT_0292 amidophosphoribosyltransferase (EC 2.4.2.14) low > 76
Erwinia amylovora T8 0.36 OLJFJH_04150 phosphoenolpyruvate carboxykinase (ATP) 0.63 OLJFJH_11280 amidophosphoribosyltransferase low > 58
Vibrio cholerae E7946 ATCC 55056 0.36 CSW01_13810 phosphoenolpyruvate carboxykinase (ATP) 0.62 CSW01_05115 amidophosphoribosyltransferase low > 62
Erwinia tracheiphila HP pepo 2.2 0.36 IJEDHG_11970 pckA phosphoenolpyruvate carboxykinase (ATP) 0.63 IJEDHG_17915 purF amidophosphoribosyltransferase low > 61
Dickeya dianthicola ME23 0.36 DZA65_RS20830 phosphoenolpyruvate carboxykinase (ATP) 0.63 DZA65_RS15335 amidophosphoribosyltransferase low > 75
Erwinia tracheiphila SCR3 0.36 LU632_RS22930 pckA phosphoenolpyruvate carboxykinase (ATP) 0.63 LU632_RS07865 purF amidophosphoribosyltransferase low > 74
Dickeya dadantii 3937 0.36 DDA3937_RS19610 phosphoenolpyruvate carboxykinase (ATP) 0.63 DDA3937_RS14435 amidophosphoribosyltransferase low > 74
Rahnella sp. WP5 0.36 EX31_RS04780 phosphoenolpyruvate carboxykinase (ATP) 0.62 EX31_RS19570 amidophosphoribosyltransferase low > 89
Dickeya dianthicola 67-19 0.36 HGI48_RS19740 phosphoenolpyruvate carboxykinase (ATP) 0.63 HGI48_RS14405 amidophosphoribosyltransferase low > 71
Pantoea sp. MT58 0.36 IAI47_01830 phosphoenolpyruvate carboxykinase (ATP) 0.63 IAI47_06275 amidophosphoribosyltransferase low > 76
Pectobacterium carotovorum WPP14 0.35 HER17_RS01710 phosphoenolpyruvate carboxykinase (ATP) 0.63 HER17_RS07020 amidophosphoribosyltransferase low > 75
Pantoea agglomerans CFBP13505 P0401 0.35 PagCFBP13505_RS18350 phosphoenolpyruvate carboxykinase (ATP) 0.62 PagCFBP13505_RS00230 amidophosphoribosyltransferase low > 74
Phocaeicola dorei CL03T12C01 0.35 ABI39_RS06685 phosphoenolpyruvate carboxykinase (ATP) 0.12 ABI39_RS18960 amidophosphoribosyltransferase — —
Phocaeicola vulgatus CL09T03C04 0.34 HMPREF1058_RS10065 phosphoenolpyruvate carboxykinase (ATP) 0.12 HMPREF1058_RS04675 amidophosphoribosyltransferase — —
Parabacteroides merdae CL09T00C40 0.34 HMPREF1078_RS07235 phosphoenolpyruvate carboxykinase (ATP) 0.12 HMPREF1078_RS10430 amidophosphoribosyltransferase — —

Not shown: 8 genomes with orthologs for Psyr_0168 only; 43 genomes with orthologs for Psyr_1668 only