Conservation of cofitness between Psyr_2980 and Psyr_1373 in Pseudomonas syringae pv. syringae B728a

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_2980 UDP-glucose pyrophosphorylase 1.0 Psyr_1373 Peptidoglycan-binding LysM:Peptidase M23B 0.54 4
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_2980 UDP-glucose pyrophosphorylase 1.00 Psyr_1373 Peptidoglycan-binding LysM:Peptidase M23B — —
Pseudomonas sp. BP01 0.92 JOY50_RS04115 galU UTP--glucose-1-phosphate uridylyltransferase GalU 0.65 JOY50_RS23750 peptidoglycan DD-metalloendopeptidase family protein — —
Pseudomonas fluorescens FW300-N2E3 0.89 AO353_26975 UTP--glucose-1-phosphate uridylyltransferase 0.70 AO353_16610 peptigoglycan-binding protein LysM — —
Pseudomonas fluorescens FW300-N2C3 0.89 AO356_22795 UTP--glucose-1-phosphate uridylyltransferase 0.69 AO356_05890 peptigoglycan-binding protein LysM — —
Pseudomonas sp. DMC3 0.89 GFF2945 UTP--glucose-1-phosphate uridylyltransferase 0.69 GFF2083 Murein hydrolase activator NlpD — —
Pseudomonas sp. RS175 0.89 PFR28_02484 UTP--glucose-1-phosphate uridylyltransferase 0.70 PFR28_00426 hypothetical protein — —
Pseudomonas putida KT2440 0.88 PP_3821 UTP-glucose-1-phosphate uridylyltransferase 0.61 PP_1622 metallopeptidase, M23B subfamily — —
Pseudomonas sp. SVBP6 0.88 COO64_RS22980 galU UTP--glucose-1-phosphate uridylyltransferase GalU 0.66 COO64_RS19790 peptidoglycan DD-metalloendopeptidase family protein low > 93
Pseudomonas fluorescens SBW25-INTG 0.87 PFLU_RS14550 UTP--glucose-1-phosphate uridylyltransferase GalU 0.70 PFLU_RS06425 peptidoglycan DD-metalloendopeptidase family protein — —
Pseudomonas lactucae CFBP13502 0.87 GEMAOFIL_02926 UTP--glucose-1-phosphate uridylyltransferase 0.69 GEMAOFIL_01442 hypothetical protein — —
Pseudomonas fluorescens SBW25 0.87 PFLU_RS14550 UTP--glucose-1-phosphate uridylyltransferase GalU 0.70 PFLU_RS06425 peptidoglycan DD-metalloendopeptidase family protein — —
Pseudomonas simiae WCS417 0.87 PS417_14065 UTP--glucose-1-phosphate uridylyltransferase 0.69 PS417_06360 peptigoglycan-binding protein LysM — —
Pseudomonas sp. S08-1 0.86 OH686_01620 UTP--glucose-1-phosphate uridylyltransferase 0.55 OH686_18180 Murein hydrolase activator NlpD low > 80
Pseudomonas stutzeri RCH2 0.86 Psest_2232 UTP-glucose-1-phosphate uridylyltransferase 0.56 Psest_2807 Membrane proteins related to metalloendopeptidases — —
Pseudomonas aeruginosa PA14 0.85 IKLFDK_09895 UTP--glucose-1-phosphate uridylyltransferase GalU 0.60 IKLFDK_18500 Lipo NlpD/LppB-like protein 0.39 39
Pseudomonas aeruginosa MRSN321 0.85 DY961_RS16305 galU;go_function=UTP:glucose-1-phosphate UTP--glucose-1-phosphate uridylyltransferase GalU 0.60 DY961_RS14860 peptidoglycan DD-metalloendopeptidase family protein low > 100
Pseudomonas aeruginosa PUPa3 0.85 DQ20_RS38625 galU;go_function=UTP:glucose-1-phosphate UTP--glucose-1-phosphate uridylyltransferase GalU 0.60 DQ20_RS42265 peptidoglycan DD-metalloendopeptidase family protein — —
Pseudomonas segetis P6 0.84 ACVTMO_RS12465 galU UTP--glucose-1-phosphate uridylyltransferase GalU 0.62 ACVTMO_RS16965 peptidoglycan DD-metalloendopeptidase family protein low > 75
Cupriavidus basilensis FW507-4G11 0.52 RR42_RS15100 UTP--glucose-1-phosphate uridylyltransferase 0.28 RR42_RS13190 outer membrane metallopeptidase lipoprotein nlpD — —
Variovorax sp. SCN45 0.51 GFF6022 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) 0.35 GFF2843 Murein hydrolase activator NlpD low > 127
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS16290 UTP--glucose-1-phosphate uridylyltransferase GalU 0.29 ABZR87_RS10870 peptidoglycan DD-metalloendopeptidase family protein low > 80
Ralstonia solanacearum GMI1000 0.51 RS_RS17225 UTP--glucose-1-phosphate uridylyltransferase 0.32 RS_RS06040 LysM peptidoglycan-binding domain-containing protein low > 80
Ralstonia solanacearum UW163 0.50 UW163_RS16490 UTP--glucose-1-phosphate uridylyltransferase 0.32 UW163_RS12695 hypothetical protein — —
Ralstonia solanacearum IBSBF1503 0.50 RALBFv3_RS23240 UTP--glucose-1-phosphate uridylyltransferase 0.32 RALBFv3_RS15230 hypothetical protein low > 76
Ralstonia solanacearum PSI07 0.50 RPSI07_RS00030 UTP--glucose-1-phosphate uridylyltransferase 0.32 RPSI07_RS18145 LysM peptidoglycan-binding domain-containing protein low > 81
Variovorax sp. OAS795 0.50 ABID97_RS07895 UTP--glucose-1-phosphate uridylyltransferase GalU 0.33 ABID97_RS10725 peptidoglycan DD-metalloendopeptidase family protein — —
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS05100 UTP--glucose-1-phosphate uridylyltransferase GalU 0.29 QEN71_RS22245 peptidoglycan DD-metalloendopeptidase family protein — —
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_04467 UDP-glucose pyrophosphorylase 0.33 H281DRAFT_00843 lipoprotein NlpD low > 103
Paraburkholderia graminis OAS925 0.49 ABIE53_002940 UTP--glucose-1-phosphate uridylyltransferase 0.33 ABIE53_002056 lipoprotein NlpD low > 113
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS13860 UTP--glucose-1-phosphate uridylyltransferase 0.32 BPHYT_RS09110 peptidase M23 — —
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS13375 UTP--glucose-1-phosphate uridylyltransferase 0.27 HSERO_RS14835 peptidase M23 low > 78
Acidovorax sp. GW101-3H11 0.48 Ac3H11_3541 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) 0.33 Ac3H11_1786 Lipoprotein NlpD — —
Dechlorosoma suillum PS 0.47 Dsui_2700 UTP-glucose-1-phosphate uridylyltransferase 0.34 Dsui_1970 metalloendopeptidase-like membrane protein — —
Methylophilus sp. DMC18 0.46 GFF1125 UTP--glucose-1-phosphate uridylyltransferase 0.24 GFF448 Murein hydrolase activator NlpD — —
Lysobacter sp. OAE881 0.45 ABIE51_RS09375 UTP--glucose-1-phosphate uridylyltransferase GalU 0.27 ABIE51_RS06500 peptidoglycan DD-metalloendopeptidase family protein low > 62
Hydrogenophaga sp. GW460-11-11-14-LB1 0.45 GFF3326 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) 0.34 GFF3881 Lipoprotein NlpD low > 90
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS18065 UTP--glucose-1-phosphate uridylyltransferase GalU 0.28 LRK54_RS16665 peptidoglycan DD-metalloendopeptidase family protein — —
Rhodanobacter sp000427505 FW510-R12 0.44 LRK53_RS11295 UTP--glucose-1-phosphate uridylyltransferase GalU 0.28 LRK53_RS12255 peptidoglycan DD-metalloendopeptidase family protein — —
Rhodanobacter denitrificans MT42 0.44 LRK55_RS17920 UTP--glucose-1-phosphate uridylyltransferase GalU 0.28 LRK55_RS16390 peptidoglycan DD-metalloendopeptidase family protein — —
Dyella japonica UNC79MFTsu3.2 0.44 ABZR86_RS05535 UTP--glucose-1-phosphate uridylyltransferase GalU 0.27 ABZR86_RS06580 peptidoglycan DD-metalloendopeptidase family protein — —
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.2387.1 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) 0.31 Xcc-8004.3127.1 Lipoprotein NlpD — —
Rhodanobacter sp. FW510-T8 0.43 OKGIIK_07235 galU UTP--glucose-1-phosphate uridylyltransferase GalU 0.27 OKGIIK_08100 Peptidase M23 — —
Alteromonas macleodii MIT1002 0.38 MIT1002_00981 UTP--glucose-1-phosphate uridylyltransferase 0.34 MIT1002_00626 Murein hydrolase activator NlpD precursor — —
Serratia liquefaciens MT49 0.38 IAI46_08120 UTP--glucose-1-phosphate uridylyltransferase GalU 0.35 IAI46_03785 murein hydrolase activator NlpD 0.79 2
Shewanella amazonensis SB2B 0.38 Sama_2223 UTP--glucose-1-phosphate uridylyltransferase (RefSeq) 0.32 Sama_1043 lipoprotein NlpD (RefSeq) low > 62
Rahnella sp. WP5 0.37 EX31_RS11525 UTP--glucose-1-phosphate uridylyltransferase GalU 0.36 EX31_RS07830 murein hydrolase activator NlpD 0.54 45
Shewanella loihica PV-4 0.37 Shew_1418 UTP-glucose-1-phosphate uridylyltransferase GalU (RefSeq) 0.33 Shew_1212 peptidase M23B (RefSeq) low > 60
Shewanella oneidensis MR-1 0.37 SO1665 galU UTP-glucose-1-phosphate uridylyltransferase (NCBI ptt file) 0.31 SO3433 nlpD lipoprotein NlpD (NCBI ptt file) low > 76
Dickeya dadantii 3937 0.37 DDA3937_RS10345 UTP--glucose-1-phosphate uridylyltransferase GalU 0.32 DDA3937_RS16880 murein hydrolase activator NlpD — —
Shewanella sp. ANA-3 0.37 Shewana3_2782 UDP-glucose pyrophosphorylase (RefSeq) 0.33 Shewana3_1123 peptidase M23B (RefSeq) low > 73
Acinetobacter radioresistens SK82 0.35 MPMX26_00063 UTP--glucose-1-phosphate uridylyltransferase 0.27 MPMX26_01055 Murein hydrolase activator NlpD low > 36
Acinetobacter baumannii LAC-4 0.33 RR41_RS18540 UTP--glucose-1-phosphate uridylyltransferase GalU 0.29 RR41_RS05350 peptidoglycan DD-metalloendopeptidase family protein low > 55

Not shown: 56 genomes with orthologs for Psyr_2980 only; 0 genomes with orthologs for Psyr_1373 only