| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas fluorescens FW300-N2E2 | 1.0 | Pf6N2E2_5045 | | Permease of the drug/metabolite transporter (DMT) superfamily | 1.0 | Pf6N2E2_5723 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) | 0.28 | 19 |
| Pseudomonas fluorescens FW300-N2C3 | 0.98 | AO356_15525 | | hypothetical protein | 1.00 | AO356_19060 | | (p)ppGpp synthetase | low | > 104 |
| Pseudomonas sp. RS175 | 0.97 | PFR28_03826 | | putative inner membrane transporter YedA | 0.99 | PFR28_03223 | | GTP pyrophosphokinase | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.88 | Pf1N1B4_2735 | | Permease of the drug/metabolite transporter (DMT) superfamily | 0.98 | Pf1N1B4_3508 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) | low | > 87 |
| Pseudomonas fluorescens GW456-L13 | 0.88 | PfGW456L13_1408 | | Permease of the drug/metabolite transporter (DMT) superfamily | 0.96 | PfGW456L13_2035 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) | low | > 87 |
| Pseudomonas simiae WCS417 | 0.84 | PS417_24505 | | membrane protein | 0.97 | PS417_20150 | | (p)ppGpp synthetase | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.84 | AO353_06270 | | hypothetical protein | 0.97 | AO353_02710 | | (p)ppGpp synthetase | low | > 101 |
| Pseudomonas fluorescens SBW25 | 0.84 | PFLU_RS26430 | | drug/metabolite exporter YedA | 0.97 | PFLU_RS22095 | | GTP diphosphokinase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.84 | PFLU_RS26430 | | drug/metabolite exporter YedA | 0.97 | PFLU_RS22095 | | GTP diphosphokinase | low | > 109 |
| Pseudomonas putida KT2440 | 0.72 | PP_4767 | | amino acid exporter for phenylalanine, threonine | 0.91 | PP_1656 | | ATP:GTP 3'-pyrophosphotransferase | low | > 96 |
| Pseudomonas syringae pv. syringae B728a | 0.69 | Psyr_4298 | | Protein of unknown function DUF6 | 0.94 | Psyr_3695 | | RelA/SpoT protein | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.69 | Psyr_4298 | | Protein of unknown function DUF6 | 0.94 | Psyr_3695 | | RelA/SpoT protein | low | > 86 |
| Rahnella sp. WP5 | 0.56 | EX31_RS23955 | | drug/metabolite exporter YedA | 0.48 | EX31_RS07955 | | GTP diphosphokinase | low | > 89 |
| Serratia liquefaciens MT49 | 0.53 | IAI46_07395 | | drug/metabolite exporter YedA | 0.47 | IAI46_03600 | | GTP diphosphokinase | low | > 86 |
| Klebsiella michiganensis M5al | 0.49 | BWI76_RS18410 | | drug/metabolite exporter YedA | 0.47 | BWI76_RS22805 | | GTP diphosphokinase | low | > 92 |
| Escherichia coli ECRC62 | 0.49 | BNILDI_15030 | yedA | drug/metabolite exporter YedA | 0.47 | BNILDI_10630 | relA | GTP diphosphokinase | low | > 75 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.48 | GFF3998 | | Permease of the drug/metabolite transporter (DMT) superfamily | 0.46 | GFF4837 | | 'GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)' transl_table=11 | low | > 78 |
| Escherichia coli ECOR38 | 0.48 | HEPCGN_03970 | yedA | drug/metabolite exporter YedA | 0.47 | HEPCGN_19500 | relA | GTP diphosphokinase | low | > 87 |
| Escherichia coli ECOR27 | 0.46 | NOLOHH_16240 | yedA | drug/metabolite exporter YedA | 0.47 | NOLOHH_12125 | relA | GTP diphosphokinase | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.46 | OHPLBJKB_01769 | | putative inner membrane transporter YedA | 0.47 | OHPLBJKB_00947 | | GTP pyrophosphokinase | low | > 73 |
| Escherichia coli ECRC100 | 0.46 | OKFHMN_25610 | yedA | drug/metabolite exporter YedA | 0.47 | OKFHMN_20250 | relA | GTP diphosphokinase | low | > 80 |
| Escherichia coli Nissle 1917 | 0.46 | ECOLIN_RS11140 | | drug/metabolite exporter YedA | 0.47 | ECOLIN_RS15515 | | GTP diphosphokinase | low | > 55 |
| Escherichia coli ECRC99 | 0.46 | KEDOAH_02485 | yedA | drug/metabolite exporter YedA | 0.47 | KEDOAH_07880 | relA | GTP diphosphokinase | — | — |
| Escherichia coli BW25113 | 0.46 | b1959 | yedA | predicted inner membrane protein (NCBI) | 0.47 | b2784 | relA | (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) | low | > 76 |
| Escherichia coli ECRC102 | 0.46 | NIAGMN_02445 | yedA | drug/metabolite exporter YedA | 0.47 | NIAGMN_18020 | relA | GTP diphosphokinase | — | — |
| Escherichia coli ECRC98 | 0.46 | JDDGAC_00195 | yedA | drug/metabolite exporter YedA | 0.47 | JDDGAC_23915 | relA | GTP diphosphokinase | low | > 86 |
| Escherichia coli ECRC101 | 0.46 | MCAODC_19785 | yedA | drug/metabolite exporter YedA | 0.47 | MCAODC_10775 | relA | GTP diphosphokinase | low | > 87 |
| Escherichia fergusonii Becca | 0.46 | EFB2_01988 | | putative inner membrane transporter YedA | 0.47 | EFB2_01133 | | GTP pyrophosphokinase | low | > 86 |
| Dyella japonica UNC79MFTsu3.2 | 0.45 | ABZR86_RS11675 | | drug/metabolite exporter YedA | 0.41 | ABZR86_RS19725 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | low | > 74 |
| Enterobacter sp. TBS_079 | 0.45 | MPMX20_02955 | | putative inner membrane transporter YedA | 0.46 | MPMX20_03653 | | GTP pyrophosphokinase | low | > 85 |
| Enterobacter asburiae PDN3 | 0.44 | EX28DRAFT_0595 | | Predicted permease, DMT superfamily | 0.46 | EX28DRAFT_2864 | | (p)ppGpp synthetase, RelA/SpoT family | low | > 76 |
| Rhodanobacter sp. FW510-T8 | 0.40 | OKGIIK_11930 | yedA | drug/metabolite exporter YedA | 0.40 | OKGIIK_02170 | relA | GTP diphosphokinase | low | > 52 |
| Rhodanobacter denitrificans MT42 | 0.39 | LRK55_RS11680 | | drug/metabolite exporter YedA | 0.41 | LRK55_RS12430 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.39 | LRK54_RS11955 | | drug/metabolite exporter YedA | 0.41 | LRK54_RS12725 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | low | > 59 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.38 | Xcc-8004.4970.1 | | Permease of the drug/metabolite transporter (DMT) superfamily | 0.38 | Xcc-8004.1489.1 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I | low | > 74 |
| Lysobacter sp. OAE881 | 0.37 | ABIE51_RS03200 | | drug/metabolite exporter YedA | 0.36 | ABIE51_RS05170 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | low | > 62 |
| Cupriavidus basilensis FW507-4G11 | 0.31 | RR42_RS31400 | | GntR family transcriptional regulator | 0.38 | RR42_RS06585 | | GTP pyrophosphokinase | low | > 128 |
| Ralstonia solanacearum GMI1000 | 0.30 | RS_RS21045 | | GntR family transcriptional regulator | 0.39 | RS_RS07930 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | low | > 80 |
| Variovorax sp. SCN45 | 0.30 | GFF940 | | Permease of the drug/metabolite transporter (DMT) superfamily | 0.34 | GFF403 | | Inactive (p)ppGpp 3'-pyrophosphohydrolase domain / GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I | low | > 127 |
| Ralstonia sp. UNC404CL21Col | 0.29 | ABZR87_RS20410 | | EamA family transporter | 0.39 | ABZR87_RS13745 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.28 | RPSI07_RS03405 | | GntR family transcriptional regulator | 0.39 | RPSI07_RS15685 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | low | > 81 |
| Ralstonia solanacearum UW163 | 0.27 | UW163_RS19390 | | GntR family transcriptional regulator | 0.39 | UW163_RS15115 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.27 | RALBFv3_RS19785 | | GntR family transcriptional regulator | 0.39 | RALBFv3_RS01805 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | low | > 76 |
| Acidovorax sp. GW101-3H11 | 0.27 | Ac3H11_4554 | | Permease of the drug/metabolite transporter (DMT) superfamily | 0.35 | Ac3H11_362 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I | low | > 79 |
| Paraburkholderia sabiae LMG 24235 | 0.25 | QEN71_RS05485 | | EamA family transporter | 0.39 | QEN71_RS05265 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | 0.42 | 31 |
| Paraburkholderia graminis OAS925 | 0.23 | ABIE53_002851 | | drug/metabolite transporter (DMT)-like permease | 0.38 | ABIE53_002905 | | GTP pyrophosphokinase | low | > 113 |
| Burkholderia phytofirmans PsJN | 0.23 | BPHYT_RS13190 | | membrane protein | 0.38 | BPHYT_RS13655 | | GTP pyrophosphokinase | low | > 109 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.23 | H281DRAFT_00402 | | Permease of the drug/metabolite transporter (DMT) superfamily | 0.38 | H281DRAFT_04499 | | GTP pyrophosphokinase | low | > 103 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.22 | BT1397 | | putative membrane protein (NCBI ptt file) | 0.24 | BT0700 | | GTP pyrophosphokinase (NCBI ptt file) | low | > 81 |
| Phocaeicola dorei CL03T12C01 | 0.20 | ABI39_RS19240 | | EamA family transporter | 0.23 | ABI39_RS14150 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | low | > 72 |
| Pseudomonas sp. S08-1 | 0.17 | OH686_04575 | | hypothetical protein | 0.88 | OH686_18960 | | Inactive (p)ppGpp 3'-pyrophosphohydrolase domain / GTP pyrophosphokinase , (p)ppGpp synthetase I | low | > 80 |
| Synechococcus elongatus PCC 7942 | 0.15 | Synpcc7942_1917 | | permease of the drug/metabolite transporter | 0.34 | Synpcc7942_1377 | | metal dependent phosphohydrolase | low | > 38 |
| Dechlorosoma suillum PS | 0.11 | Dsui_1370 | | putative permease, DMT superfamily | 0.41 | Dsui_2816 | | (p)ppGpp synthetase, RelA/SpoT family | low | > 51 |
| Shewanella loihica PV-4 | 0.09 | Shew_3337 | | hypothetical protein (RefSeq) | 0.46 | Shew_1202 | | (p)ppGpp synthetase I, SpoT/RelA (RefSeq) | low | > 60 |
Not shown: 5 genomes with orthologs for Pf6N2E2_5045 only; 25 genomes with orthologs for Pf6N2E2_5723 only