Conservation of cofitness between Pf6N2E2_5594 and Pf6N2E2_5506 in Pseudomonas fluorescens FW300-N2E2

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E2 1.0 Pf6N2E2_5594 Endonuclease III (EC 4.2.99.18) 1.0 Pf6N2E2_5506 Exodeoxyribonuclease I (EC 3.1.11.1) 0.28 17
Pseudomonas fluorescens FW300-N2C3 0.99 AO356_18345 endonuclease III 0.96 AO356_17885 exonuclease I low > 104
Pseudomonas sp. RS175 0.98 PFR28_03349 Endonuclease III 0.90 PFR28_03441 Exodeoxyribonuclease I low > 88
Pseudomonas fluorescens FW300-N1B4 0.97 Pf1N1B4_739 Endonuclease III (EC 4.2.99.18) 0.84 Pf1N1B4_668 Exodeoxyribonuclease I (EC 3.1.11.1) low > 87
Pseudomonas fluorescens GW456-L13 0.96 PfGW456L13_1753 Endonuclease III (EC 4.2.99.18) 0.84 PfGW456L13_1823 Exodeoxyribonuclease I (EC 3.1.11.1) 0.28 46
Pseudomonas fluorescens FW300-N2E3 0.96 AO353_04085 endonuclease III 0.84 AO353_03720 exonuclease I 0.27 23
Pseudomonas fluorescens SBW25 0.95 PFLU_RS05740 endonuclease III 0.83 PFLU_RS24210 exodeoxyribonuclease I low > 109
Pseudomonas fluorescens SBW25-INTG 0.95 PFLU_RS05740 endonuclease III 0.83 PFLU_RS24210 exodeoxyribonuclease I low > 109
Pseudomonas simiae WCS417 0.95 PS417_05655 endonuclease III 0.82 PS417_22575 exonuclease I low > 88
Pseudomonas putida KT2440 0.93 PP_1092 DNA glycosylase/apyrimidinic (AP) lyase specific for damaged pyrimidinic sites 0.75 PP_1365 exodeoxyribonuclease I — —
Pseudomonas sp. S08-1 0.92 OH686_03910 endonuclease III 0.73 OH686_18285 Exodeoxyribonuclease I low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.91 Psyr_3888 endonuclease III / DNA-(apurinic or apyrimidinic site) lyase 0.78 Psyr_4020 Exodeoxyribonuclease I subunit C low > 86
Pseudomonas syringae pv. syringae B728a 0.91 Psyr_3888 endonuclease III / DNA-(apurinic or apyrimidinic site) lyase 0.78 Psyr_4020 Exodeoxyribonuclease I subunit C low > 86
Pseudomonas stutzeri RCH2 0.89 Psest_3118 endonuclease III 0.69 Psest_3180 Exonuclease I low > 67
Marinobacter adhaerens HP15 0.81 HP15_1285 endonuclease III 0.42 HP15_2375 exonuclease I — —
Escherichia coli ECRC102 0.75 NIAGMN_00540 nth endonuclease III 0.41 NIAGMN_22510 sbcB exodeoxyribonuclease I — —
Escherichia coli ECRC99 0.75 KEDOAH_00580 nth endonuclease III 0.41 KEDOAH_03585 sbcB exodeoxyribonuclease I — —
Escherichia coli ECRC98 0.75 JDDGAC_02115 nth endonuclease III 0.41 JDDGAC_28675 sbcB exodeoxyribonuclease I low > 86
Escherichia coli ECRC100 0.75 OKFHMN_27525 nth endonuclease III 0.41 OKFHMN_24565 sbcB exodeoxyribonuclease I low > 80
Escherichia coli ECRC101 0.75 MCAODC_17885 nth endonuclease III 0.41 MCAODC_20375 sbcB exodeoxyribonuclease I 0.65 7
Escherichia coli ECOR38 0.75 HEPCGN_05910 nth endonuclease III 0.41 HEPCGN_03270 sbcB exodeoxyribonuclease I low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF3641 Endonuclease III (EC 4.2.99.18) 0.41 GFF3917 Exodeoxyribonuclease I (EC 3.1.11.1) low > 78
Escherichia coli ECRC62 0.75 BNILDI_16835 nth endonuclease III 0.41 BNILDI_14790 sbcB exodeoxyribonuclease I low > 75
Escherichia fergusonii Becca 0.75 EFB2_02359 Endonuclease III 0.41 EFB2_01845 Exodeoxyribonuclease I low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_02093 Endonuclease III 0.41 OHPLBJKB_01689 Exodeoxyribonuclease I low > 73
Escherichia coli BL21 0.75 ECD_01603 DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) 0.41 ECD_01914 exodeoxyribonuclease I; exonuclease I — —
Escherichia coli BW25113 0.75 b1633 nth DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) (NCBI) 0.41 b2011 sbcB exonuclease I (NCBI) low > 76
Escherichia coli ECOR27 0.75 NOLOHH_18045 nth endonuclease III 0.41 NOLOHH_15890 sbcB exodeoxyribonuclease I — —
Escherichia coli Nissle 1917 0.75 ECOLIN_RS09110 endonuclease III 0.41 ECOLIN_RS11910 exodeoxyribonuclease I — —
Klebsiella michiganensis M5al 0.74 BWI76_RS16385 endonuclease III 0.41 BWI76_RS18785 exodeoxyribonuclease I — —
Pectobacterium carotovorum WPP14 0.74 HER17_RS10860 endonuclease III 0.44 HER17_RS12135 exodeoxyribonuclease I low > 75
Pantoea sp. MT58 0.74 IAI47_10475 endonuclease III 0.43 IAI47_07165 exodeoxyribonuclease I low > 76
Enterobacter asburiae PDN3 0.74 EX28DRAFT_1629 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18)/endonuclease III (EC 3.2.2.-) 0.42 EX28DRAFT_0545 Exodeoxyribonuclease I subunit C (EC 3.1.11.1) low > 76
Erwinia tracheiphila SCR3 0.74 LU632_RS11305 nth endonuclease III 0.43 LU632_RS15835 sbcB exodeoxyribonuclease I low > 74
Serratia liquefaciens MT49 0.74 IAI46_11455 endonuclease III 0.44 IAI46_17150 exodeoxyribonuclease I low > 86
Shewanella oneidensis MR-1 0.74 SO2514 nth endonuclease III (NCBI ptt file) 0.45 SO2790 sbcB exodeoxyribonuclease I (NCBI ptt file) low > 76
Enterobacter sp. TBS_079 0.74 MPMX20_02005 Endonuclease III 0.41 MPMX20_02997 Exodeoxyribonuclease I low > 85
Shewanella amazonensis SB2B 0.73 Sama_1836 endonuclease III (RefSeq) 0.47 Sama_1973 sbcB exonuclease I (RefSeq) low > 62
Rahnella sp. WP5 0.73 EX31_RS06590 endonuclease III 0.44 EX31_RS17885 exodeoxyribonuclease I low > 89
Vibrio cholerae E7946 ATCC 55056 0.73 CSW01_05145 endonuclease III 0.43 CSW01_06240 exodeoxyribonuclease I low > 62
Shewanella sp. ANA-3 0.72 Shewana3_2174 DNA-(apurinic or apyrimidinic site) lyase / endonuclease III (RefSeq) 0.46 Shewana3_2572 sbcB exonuclease I (RefSeq) low > 73
Dickeya dianthicola ME23 0.72 DZA65_RS11025 endonuclease III 0.46 DZA65_RS10155 exodeoxyribonuclease I low > 75
Rhodanobacter denitrificans FW104-10B01 0.72 LRK54_RS01850 endonuclease III 0.43 LRK54_RS17465 exodeoxyribonuclease I low > 59
Rhodanobacter denitrificans MT42 0.72 LRK55_RS01640 endonuclease III 0.43 LRK55_RS17685 exodeoxyribonuclease I low > 63
Dickeya dianthicola 67-19 0.72 HGI48_RS10545 endonuclease III 0.46 HGI48_RS09830 exodeoxyribonuclease I — —
Dickeya dadantii 3937 0.71 DDA3937_RS10545 endonuclease III 0.45 DDA3937_RS09820 exodeoxyribonuclease I low > 74
Dyella japonica UNC79MFTsu3.2 0.71 ABZR86_RS08185 endonuclease III 0.43 ABZR86_RS01905 exodeoxyribonuclease I low > 74
Rhodanobacter sp. FW510-T8 0.71 OKGIIK_04675 nth endonuclease III 0.42 OKGIIK_07470 sbcB exodeoxyribonuclease I low > 52
Shewanella loihica PV-4 0.70 Shew_2072 endonuclease III (RefSeq) 0.47 Shew_1611 sbcB exonuclease I (RefSeq) low > 60
Xanthomonas campestris pv. campestris strain 8004 0.70 Xcc-8004.3350.1 Endonuclease III (EC 4.2.99.18) 0.39 Xcc-8004.3329.1 Exodeoxyribonuclease I (EC 3.1.11.1) low > 74
Ralstonia solanacearum PSI07 0.70 RPSI07_RS19265 endonuclease III 0.42 RPSI07_RS09480 exodeoxyribonuclease I — —
Ralstonia sp. UNC404CL21Col 0.70 ABZR87_RS09915 endonuclease III 0.42 ABZR87_RS03495 exodeoxyribonuclease I low > 80
Ralstonia solanacearum GMI1000 0.70 RS_RS04975 endonuclease III 0.42 RS_RS15700 exodeoxyribonuclease I low > 80
Ralstonia solanacearum UW163 0.70 UW163_RS11660 endonuclease III 0.41 UW163_RS05825 exodeoxyribonuclease I — —
Ralstonia solanacearum IBSBF1503 0.70 RALBFv3_RS14195 endonuclease III 0.41 RALBFv3_RS07800 exodeoxyribonuclease I low > 76
Variovorax sp. SCN45 0.69 GFF418 Endonuclease III (EC 4.2.99.18) 0.41 GFF339 Exodeoxyribonuclease I (EC 3.1.11.1) low > 127
Acidovorax sp. GW101-3H11 0.68 Ac3H11_1010 Endonuclease III (EC 4.2.99.18) 0.41 Ac3H11_2454 Exodeoxyribonuclease I (EC 3.1.11.1) 0.42 32
Variovorax sp. OAS795 0.67 ABID97_RS17315 endonuclease III 0.42 ABID97_RS16900 exodeoxyribonuclease I low > 91
Lysobacter sp. OAE881 0.67 ABIE51_RS07560 endonuclease III 0.39 ABIE51_RS12700 exodeoxyribonuclease I low > 62
Bosea sp. OAE506 0.59 ABIE41_RS03410 endonuclease III 0.15 ABIE41_RS00465 exonuclease domain-containing protein low > 77
Alteromonas macleodii MIT1002 0.32 MIT1002_01251 Endonuclease III 0.39 MIT1002_01676 Exodeoxyribonuclease I low > 70

Not shown: 35 genomes with orthologs for Pf6N2E2_5594 only; 0 genomes with orthologs for Pf6N2E2_5506 only