| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas putida KT2440 | 1.0 | PP_1317 | | Ubiquinol-cytochrome c reductase iron-sulfur subunit | 1.0 | PP_4261 | | cation-transporting P-type ATPase | 0.62 | 3 |
| Pseudomonas fluorescens FW300-N2E3 | 0.87 | AO353_15245 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.76 | AO353_00640 | | carbonate dehydratase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.86 | Pf1N1B4_962 | | Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) | 0.78 | Pf1N1B4_3871 | | Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) | 0.74 | 5 |
| Pseudomonas fluorescens FW300-N2C3 | 0.86 | AO356_17065 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.77 | AO356_02465 | | carbonate dehydratase | 0.65 | 4 |
| Pseudomonas fluorescens FW300-N2E2 | 0.86 | Pf6N2E2_5337 | | Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) | 0.76 | Pf6N2E2_2318 | | Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) | 0.84 | 4 |
| Pseudomonas sp. RS175 | 0.86 | PFR28_03606 | | Ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.76 | PFR28_01083 | | putative copper-importing P-type ATPase A | — | — |
| Pseudomonas sp. S08-1 | 0.86 | OH686_08390 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit | 0.67 | OH686_02220 | | cadmium-translocating P-type ATPase | — | — |
| Pseudomonas fluorescens SBW25 | 0.85 | PFLU_RS04195 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.76 | PFLU_RS22370 | | cadmium-translocating P-type ATPase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.85 | PFLU_RS04195 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.76 | PFLU_RS22370 | | cadmium-translocating P-type ATPase | 0.76 | 5 |
| Pseudomonas simiae WCS417 | 0.85 | PS417_04155 | | ubiquinol-cytochrome C reductase | 0.76 | PS417_20760 | | carbonate dehydratase | — | — |
| Pseudomonas stutzeri RCH2 | 0.84 | Psest_3279 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit | 0.70 | Psest_2533 | | copper-(or silver)-translocating P-type ATPase/heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | — | — |
| Marinobacter adhaerens HP15 | 0.65 | HP15_545 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.39 | HP15_2113 | | heavy-metal transporting P-type ATPase | — | — |
| Lysobacter sp. OAE881 | 0.60 | ABIE51_RS15440 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.28 | ABIE51_RS03820 | | heavy metal translocating P-type ATPase | low | > 62 |
| Rhodanobacter denitrificans FW104-10B01 | 0.57 | LRK54_RS13765 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.25 | LRK54_RS17205 | | heavy metal translocating P-type ATPase | — | — |
| Rhodanobacter denitrificans MT42 | 0.57 | LRK55_RS13480 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.24 | LRK55_RS17430 | | heavy metal translocating P-type ATPase | — | — |
| Rhodanobacter sp. FW510-T8 | 0.56 | OKGIIK_03005 | petA | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.22 | OKGIIK_07680 | | ATPase P | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.56 | CSW01_03045 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.39 | CSW01_07205 | | copper-translocating P-type ATPase | 0.40 | 39 |
| Dyella japonica UNC79MFTsu3.2 | 0.54 | ABZR86_RS09880 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.32 | ABZR86_RS04425 | | heavy metal translocating P-type ATPase | low | > 74 |
| Kangiella aquimarina DSM 16071 | 0.54 | B158DRAFT_2100 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit | 0.37 | B158DRAFT_1972 | | copper-(or silver)-translocating P-type ATPase/heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | — | — |
| Shewanella amazonensis SB2B | 0.53 | Sama_3021 | | ubiquinol--cytochrome-c reductase (RefSeq) | 0.39 | Sama_1796 | | cation transporter E1-E2 family ATPase (RefSeq) | 0.96 | 3 |
| Shewanella loihica PV-4 | 0.53 | Shew_0570 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit (RefSeq) | 0.39 | Shew_1990 | | heavy metal translocating P-type ATPase (RefSeq) | 0.78 | 2 |
| Dechlorosoma suillum PS | 0.51 | Dsui_1812 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit | 0.42 | Dsui_1625 | | copper/silver-translocating P-type ATPase | — | — |
| Shewanella oneidensis MR-1 | 0.51 | SO0608 | petA | ubiquinol-cytochrome c reductase, iron-sulfur subunit (NCBI ptt file) | 0.38 | SO2359 | | cation transport ATPase, E1-E2 family (NCBI ptt file) | — | — |
| Shewanella sp. ANA-3 | 0.50 | Shewana3_0601 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit (RefSeq) | 0.37 | Shewana3_2112 | | heavy metal translocating P-type ATPase (RefSeq) | — | — |
| Variovorax sp. SCN45 | 0.50 | GFF6694 | | Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) | 0.28 | GFF6966 | | Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) | low | > 127 |
| Variovorax sp. OAS795 | 0.49 | ABID97_RS22985 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.28 | ABID97_RS16235 | | cation-translocating P-type ATPase | low | > 91 |
| Alteromonas macleodii MIT1002 | 0.47 | MIT1002_00814 | | Ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.35 | MIT1002_02134 | | putative copper-importing P-type ATPase A | 0.75 | 27 |
| Cupriavidus basilensis FW507-4G11 | 0.46 | RR42_RS18825 | | ubiquinol-cytochrome C reductase | 0.33 | RR42_RS12920 | | carbonate dehydratase | low | > 128 |
| Herbaspirillum seropedicae SmR1 | 0.45 | HSERO_RS20245 | | ubiquinol-cytochrome C reductase | 0.31 | HSERO_RS16065 | | cation transporter | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.43 | GFF1295 | | Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) | 0.31 | GFF4133 | | Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) | — | — |
| Ralstonia solanacearum PSI07 | 0.40 | RPSI07_RS10505 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.33 | RPSI07_RS17750 | | copper-translocating P-type ATPase | — | — |
| Ralstonia solanacearum GMI1000 | 0.40 | RS_RS14675 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.33 | RS_RS06385 | | copper-translocating P-type ATPase | low | > 80 |
| Ralstonia sp. UNC404CL21Col | 0.40 | ABZR87_RS02385 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.35 | ABZR87_RS11135 | | heavy metal translocating P-type ATPase | low | > 80 |
| Ralstonia solanacearum UW163 | 0.40 | UW163_RS06885 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.34 | UW163_RS13065 | | copper-translocating P-type ATPase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.40 | RALBFv3_RS06730 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.34 | RALBFv3_RS15605 | | copper-translocating P-type ATPase | — | — |
| Azospirillum sp. SherDot2 | 0.35 | MPMX19_05012 | | Ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.24 | MPMX19_00211 | | putative copper-importing P-type ATPase A | — | — |
| Magnetospirillum magneticum AMB-1 | 0.33 | AMB_RS20675 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.26 | AMB_RS22095 | | cadmium-translocating P-type ATPase | — | — |
| Azospirillum brasilense Sp245 | 0.33 | AZOBR_RS20745 | | ubiquinol-cytochrome C reductase | 0.25 | AZOBR_RS01150 | | ATPase P | — | — |
| Rhodospirillum rubrum S1H | 0.33 | Rru_A0364 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit (NCBI) | 0.25 | Rru_A3324 | | copper-translocating P-type ATPase (NCBI) | — | — |
| Bosea sp. OAE506 | 0.32 | ABIE41_RS11190 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.24 | ABIE41_RS10535 | | heavy metal translocating P-type ATPase | low | > 77 |
| Rhizobium sp. OAE497 | 0.30 | ABIE40_RS13130 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.23 | ABIE40_RS26135 | | cation-translocating P-type ATPase | low | > 107 |
| Rhodopseudomonas palustris CGA009 | 0.29 | TX73_006120 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.24 | TX73_000070 | | cation-translocating P-type ATPase | — | — |
| Caulobacter crescentus NA1000 | 0.27 | CCNA_00505 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.22 | CCNA_01473 | | E1-E2 cation pump ATPase fixI | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.27 | CCNA_00505 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.22 | CCNA_01473 | | E1-E2 cation pump ATPase fixI | low | > 67 |
| Dinoroseobacter shibae DFL-12 | 0.25 | Dshi_3278 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit (RefSeq) | 0.22 | Dshi_0667 | | heavy metal translocating P-type ATPase (RefSeq) | — | — |
Not shown: 11 genomes with orthologs for PP_1317 only; 5 genomes with orthologs for PP_4261 only