Conservation of cofitness between PP_1598 and PP_4004 in Pseudomonas putida KT2440

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1598 regulatory intramembrane protein RIP zinc protease 1.0 PP_4004 DNA translocase FtsK 0.32 14
Pseudomonas fluorescens SBW25 0.83 PFLU_RS06310 sigma E protease regulator RseP 0.76 PFLU_RS18530 DNA translocase FtsK low > 109
Pseudomonas fluorescens SBW25-INTG 0.83 PFLU_RS06310 sigma E protease regulator RseP 0.76 PFLU_RS18530 DNA translocase FtsK low > 109
Pseudomonas simiae WCS417 0.83 PS417_06245 zinc metallopeptidase RseP 0.77 PS417_16490 cell division protein FtsK low > 88
Pseudomonas fluorescens FW300-N2E3 0.82 AO353_16495 zinc metallopeptidase RseP 0.77 AO353_27650 cell division protein FtsK low > 101
Pseudomonas sp. RS175 0.82 PFR28_00403 Regulator of sigma-E protease RseP 0.74 PFR28_02608 DNA translocase FtsK low > 88
Pseudomonas fluorescens FW300-N2C3 0.82 AO356_06005 zinc metallopeptidase RseP 0.78 AO356_22175 cell division protein FtsK — —
Pseudomonas fluorescens GW456-L13 0.81 PfGW456L13_4701 Membrane-associated zinc metalloprotease 0.77 PfGW456L13_2651 Cell division protein FtsK low > 87
Pseudomonas fluorescens FW300-N2E2 0.81 Pf6N2E2_3062 Membrane-associated zinc metalloprotease 0.77 Pf6N2E2_297 Cell division protein FtsK — —
Pseudomonas syringae pv. syringae B728a 0.81 Psyr_1350 site-2 protease, Metallo peptidase, MEROPS family M50B 0.79 Psyr_3179 DNA translocase FtsK 0.54 76
Pseudomonas syringae pv. syringae B728a ΔmexB 0.81 Psyr_1350 site-2 protease, Metallo peptidase, MEROPS family M50B 0.79 Psyr_3179 DNA translocase FtsK low > 86
Pseudomonas fluorescens FW300-N1B4 0.80 Pf1N1B4_3091 Membrane-associated zinc metalloprotease 0.77 Pf1N1B4_4060 Cell division protein FtsK — —
Pseudomonas stutzeri RCH2 0.80 Psest_2835 RIP metalloprotease RseP 0.74 Psest_2032 DNA segregation ATPase FtsK/SpoIIIE and related proteins — —
Pseudomonas sp. S08-1 0.78 OH686_06450 RIP metalloprotease RseP 0.73 OH686_00260 DNA translocase FtsK — —
Marinobacter adhaerens HP15 0.51 HP15_1173 membrane-associated zinc metalloprotease 0.49 HP15_1819 DNA translocase FtsK — —
Shewanella loihica PV-4 0.41 Shew_2628 putative membrane-associated zinc metalloprotease (RefSeq) 0.43 Shew_2024 cell divisionFtsK/SpoIIIE (RefSeq) — —
Lysobacter sp. OAE881 0.37 ABIE51_RS06905 RIP metalloprotease RseP 0.41 ABIE51_RS11455 DNA translocase FtsK low > 62
Rhodanobacter sp. FW510-T8 0.37 OKGIIK_10175 rseP RIP metalloprotease RseP 0.43 OKGIIK_07620 ftsK cell division protein FtsK — —
Xanthomonas campestris pv. campestris strain 8004 0.37 Xcc-8004.3562.1 hypothetical protein 0.43 Xcc-8004.2749.1 Cell division protein FtsK — —
Dechlorosoma suillum PS 0.36 Dsui_2687 RIP metalloprotease RseP 0.41 Dsui_1691 DNA segregation ATPase, FtsK/SpoIIIE family — —
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS03290 RIP metalloprotease RseP 0.43 LRK54_RS17270 DNA translocase FtsK 0.89 13
Rhodanobacter denitrificans MT42 0.36 LRK55_RS03040 RIP metalloprotease RseP 0.43 LRK55_RS17495 DNA translocase FtsK — —
Dyella japonica UNC79MFTsu3.2 0.35 ABZR86_RS21620 RIP metalloprotease RseP 0.38 ABZR86_RS01810 DNA translocase FtsK — —
Variovorax sp. SCN45 0.33 GFF386 Membrane-associated zinc metalloprotease 0.38 GFF6036 DNA translocase FtsK low > 127
Herbaspirillum seropedicae SmR1 0.33 HSERO_RS10910 peptidase 0.40 HSERO_RS09500 cell division protein FtsK low > 78
Kangiella aquimarina DSM 16071 0.33 B158DRAFT_1087 site-2 protease. Metallo peptidase. MEROPS family M50B 0.48 B158DRAFT_1821 DNA segregation ATPase FtsK/SpoIIIE and related proteins low > 40
Cupriavidus basilensis FW507-4G11 0.33 RR42_RS11840 zinc metalloprotease 0.39 RR42_RS04320 cell division protein FtsK low > 128
Burkholderia phytofirmans PsJN 0.32 BPHYT_RS12105 zinc metalloprotease 0.42 BPHYT_RS05075 cell division protein FtsK — —
Paraburkholderia bryophila 376MFSha3.1 0.32 H281DRAFT_00617 site-2 protease. Metallo peptidase. MEROPS family M50B 0.38 H281DRAFT_00175 DNA translocase FtsK — —
Variovorax sp. OAS795 0.32 ABID97_RS17135 RIP metalloprotease RseP 0.39 ABID97_RS07825 DNA translocase FtsK 4TM domain-containing protein — —
Paraburkholderia sabiae LMG 24235 0.32 QEN71_RS06455 RIP metalloprotease RseP 0.43 QEN71_RS03385 DNA translocase FtsK low > 153
Paraburkholderia graminis OAS925 0.32 ABIE53_002496 regulator of sigma E protease 0.38 ABIE53_001286 S-DNA-T family DNA segregation ATPase FtsK/SpoIIIE low > 113
Ralstonia solanacearum UW163 0.30 UW163_RS13740 RIP metalloprotease RseP 0.41 UW163_RS09510 DNA translocase FtsK — —
Ralstonia solanacearum IBSBF1503 0.30 RALBFv3_RS00410 RIP metalloprotease RseP 0.41 RALBFv3_RS04160 DNA translocase FtsK — —
Ralstonia solanacearum GMI1000 0.30 RS_RS07080 RIP metalloprotease RseP 0.41 RS_RS11750 DNA translocase FtsK low > 80
Ralstonia sp. UNC404CL21Col 0.29 ABZR87_RS11860 RIP metalloprotease RseP 0.42 ABZR87_RS16060 DNA translocase FtsK low > 80
Ralstonia solanacearum PSI07 0.29 RPSI07_RS17065 RIP metalloprotease RseP 0.41 RPSI07_RS13190 DNA translocase FtsK low > 81
Acidovorax sp. GW101-3H11 0.28 Ac3H11_425 Membrane-associated zinc metalloprotease 0.37 Ac3H11_1698 Cell division protein FtsK — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.25 GFF4908 Membrane-associated zinc metalloprotease 0.37 GFF775 Cell division protein FtsK low > 90
Mucilaginibacter yixingensis YX-36 DSM 26809 0.15 ABZR88_RS10585 RIP metalloprotease RseP 0.22 ABZR88_RS03760 DNA translocase FtsK — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.15 Echvi_4671 RIP metalloprotease RseP 0.21 Echvi_1805 DNA segregation ATPase FtsK/SpoIIIE and related proteins — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.14 CA264_00025 RIP metalloprotease RseP 0.22 CA264_00870 DNA translocase FtsK — —
Bacteroides thetaiotaomicron VPI-5482 0.13 BT2001 membrane-associated zinc metalloprotease (NCBI ptt file) 0.20 BT4334 FtsK/SpoIIIE family protein (NCBI ptt file) — —
Bacteroides ovatus ATCC 8483 0.13 BACOVA_01430 putative RIP metalloprotease RseP 0.20 BACOVA_05138 FtsK/SpoIIIE family protein — —
Bacteroides stercoris CC31F 0.13 HMPREF1181_RS07905 RIP metalloprotease RseP 0.20 HMPREF1181_RS05910 DNA translocase FtsK — —
Phocaeicola dorei CL03T12C01 0.12 ABI39_RS08170 RIP metalloprotease RseP 0.20 ABI39_RS18230 DNA translocase FtsK — —
Phocaeicola vulgatus CL09T03C04 0.12 HMPREF1058_RS00550 RIP metalloprotease RseP 0.20 HMPREF1058_RS05875 DNA translocase FtsK — —
Parabacteroides merdae CL09T00C40 0.11 HMPREF1078_RS15270 RIP metalloprotease RseP 0.21 HMPREF1078_RS13700 DNA translocase FtsK low > 61

Not shown: 35 genomes with orthologs for PP_1598 only; 12 genomes with orthologs for PP_4004 only