Conservation of cofitness between PP_5203 and PP_2327 in Pseudomonas putida KT2440

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5203 5-formyltetrahydrofolate cyclo-ligase 1.0 PP_2327 transcriptional dual regulator / CysB-O-acetyl-L-serine 0.46 5
Pseudomonas fluorescens SBW25 0.75 PFLU_RS28965 5-formyltetrahydrofolate cyclo-ligase 0.96 PFLU_RS08410 HTH-type transcriptional regulator CysB low > 109
Pseudomonas fluorescens FW300-N1B4 0.75 Pf1N1B4_2225 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.96 Pf1N1B4_283 Cys regulon transcriptional activator CysB — —
Pseudomonas fluorescens SBW25-INTG 0.75 PFLU_RS28965 5-formyltetrahydrofolate cyclo-ligase 0.96 PFLU_RS08410 HTH-type transcriptional regulator CysB low > 109
Pseudomonas simiae WCS417 0.74 PS417_27305 5-formyltetrahydrofolate cyclo-ligase 0.96 PS417_08460 CysB family transcriptional regulator — —
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_08780 5-formyltetrahydrofolate cyclo-ligase 0.97 AO353_19060 CysB family transcriptional regulator 0.61 57
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_0317 5-formyltetrahydrofolate cyclo-ligase 0.93 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein low > 86
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_0317 5-formyltetrahydrofolate cyclo-ligase 0.93 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein low > 86
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_892 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.97 PfGW456L13_2230 Cys regulon transcriptional activator CysB 0.57 5
Pseudomonas sp. RS175 0.69 PFR28_04325 5-formyltetrahydrofolate cyclo-ligase 0.96 PFR28_00966 HTH-type transcriptional regulator CysB low > 88
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_12990 5-formyltetrahydrofolate cyclo-ligase 0.97 AO356_03180 CysB family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_4476 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.97 Pf6N2E2_2465 Cys regulon transcriptional activator CysB 0.50 15
Pseudomonas stutzeri RCH2 0.65 Psest_0170 5,10-methenyltetrahydrofolate synthetase 0.91 Psest_2329 Transcriptional regulator 0.50 26
Pseudomonas sp. S08-1 0.56 OH686_11225 5-formyltetrahydrofolate cyclo-ligase 0.93 OH686_01730 Cys regulon transcriptional activator CysB low > 80
Marinobacter adhaerens HP15 0.41 HP15_3211 5-formyltetrahydrofolate cyclo-ligase 0.80 HP15_1854 transcriptional regulator, LysR family — —
Vibrio cholerae E7946 ATCC 55056 0.36 CSW01_12545 5-formyltetrahydrofolate cyclo-ligase 0.70 CSW01_09545 HTH-type transcriptional regulator CysB — —
Pectobacterium carotovorum WPP14 0.35 HER17_RS19095 5-formyltetrahydrofolate cyclo-ligase 0.68 HER17_RS10870 HTH-type transcriptional regulator CysB low > 75
Serratia liquefaciens MT49 0.35 IAI46_20895 5-formyltetrahydrofolate cyclo-ligase 0.68 IAI46_13965 HTH-type transcriptional regulator CysB — —
Escherichia coli ECOR27 0.35 NOLOHH_11395 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.67 NOLOHH_20265 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC101 0.35 MCAODC_10005 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.67 MCAODC_15665 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC62 0.35 BNILDI_09930 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.67 BNILDI_18415 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC101 0.35 OKFHMN_19485 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.67 OKFHMN_02600 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC99 0.35 KEDOAH_08655 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.67 KEDOAH_26165 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC102 0.35 NIAGMN_17250 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.67 NIAGMN_26770 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC98 0.35 JDDGAC_23125 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.67 JDDGAC_05145 cysB HTH-type transcriptional regulator CysB — —
Escherichia fergusonii Becca 0.35 EFB2_00991 5-formyltetrahydrofolate cyclo-ligase 0.67 EFB2_02652 HTH-type transcriptional regulator CysB — —
Escherichia coli Nissle 1917 0.34 ECOLIN_RS16205 5-formyltetrahydrofolate cyclo-ligase 0.67 ECOLIN_RS07680 HTH-type transcriptional regulator CysB low > 52
Escherichia coli ECOR38 0.34 HEPCGN_18775 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.67 HEPCGN_25600 cysB HTH-type transcriptional regulator CysB — —
Enterobacter sp. TBS_079 0.34 MPMX20_03770 5-formyltetrahydrofolate cyclo-ligase 0.67 MPMX20_02501 HTH-type transcriptional regulator CysB — —
Shewanella sp. ANA-3 0.34 Shewana3_3506 5-formyltetrahydrofolate cyclo-ligase (RefSeq) 0.65 Shewana3_1731 cysB transcriptional regulator CysB (RefSeq) — —
Shewanella oneidensis MR-1 0.34 SO0774 5-formyltetrahydrofolate cyclo-ligase family protein (NCBI ptt file) 0.66 SO2649 cysB cys regulon transcriptional activator (NCBI ptt file) low > 76
Escherichia coli BW25113 0.33 b2912 ygfA putative ligase (VIMSS) 0.67 b1275 cysB DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding (NCBI) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_00804 5-formyltetrahydrofolate cyclo-ligase 0.67 OHPLBJKB_02409 HTH-type transcriptional regulator CysB low > 73
Escherichia coli BL21 0.33 ECD_02743 5-formyltetrahydrofolate cyclo-ligase family protein 0.67 ECD_01251 N-acetylserine-responsive cysteine regulon transcriptional activator; autorepressor — —
Rahnella sp. WP5 0.32 EX31_RS21480 5-formyltetrahydrofolate cyclo-ligase 0.68 EX31_RS09890 HTH-type transcriptional regulator CysB 0.45 26
Erwinia tracheiphila SCR3 0.32 LU632_RS05860 5-formyltetrahydrofolate cyclo-ligase 0.67 LU632_RS12550 cysB HTH-type transcriptional regulator CysB — —
Pantoea sp. MT58 0.32 IAI47_03730 5-formyltetrahydrofolate cyclo-ligase 0.67 IAI47_09240 HTH-type transcriptional regulator CysB low > 76
Klebsiella michiganensis M5al 0.32 BWI76_RS23915 5-formyltetrahydrofolate cyclo-ligase 0.67 BWI76_RS11930 LysR family transcriptional regulator CysB — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF3012 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.68 GFF2712 Cys regulon transcriptional activator CysB — —
Shewanella loihica PV-4 0.31 Shew_3069 5-formyltetrahydrofolate cyclo-ligase (RefSeq) 0.66 Shew_1624 cysB transcriptional regulator CysB (RefSeq) — —
Rhodanobacter denitrificans MT42 0.29 LRK55_RS11395 5-formyltetrahydrofolate cyclo-ligase 0.35 LRK55_RS00690 LysR substrate-binding domain-containing protein low > 63
Rhodanobacter sp. FW510-T8 0.28 OKGIIK_12225 5-formyltetrahydrofolate cyclo-ligase 0.37 OKGIIK_05975 lysR CysB family transcriptional regulator 0.69 26
Rhodanobacter denitrificans FW104-10B01 0.28 LRK54_RS11670 5-formyltetrahydrofolate cyclo-ligase 0.35 LRK54_RS00915 LysR substrate-binding domain-containing protein 0.70 25
Kangiella aquimarina DSM 16071 0.25 B158DRAFT_0528 5-formyltetrahydrofolate cyclo-ligase 0.43 B158DRAFT_2455 Transcriptional regulator low > 40
Xanthomonas campestris pv. campestris strain 8004 0.24 Xcc-8004.1138.1 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.30 Xcc-8004.1249.1 Transcriptional regulator 0.45 48
Dyella japonica UNC79MFTsu3.2 0.23 ABZR86_RS11995 5-formyltetrahydrofolate cyclo-ligase 0.37 ABZR86_RS05885 LysR substrate-binding domain-containing protein 0.90 7
Lysobacter sp. OAE881 0.23 ABIE51_RS17355 5-formyltetrahydrofolate cyclo-ligase 0.34 ABIE51_RS15850 LysR family transcriptional regulator 0.96 19
Acinetobacter radioresistens SK82 0.21 MPMX26_02298 5-formyltetrahydrofolate cyclo-ligase 0.40 MPMX26_02171 HTH-type transcriptional regulator SsuR low > 36
Ralstonia sp. UNC404CL21Col 0.19 ABZR87_RS04880 5-formyltetrahydrofolate cyclo-ligase 0.47 ABZR87_RS11555 CysB family HTH-type transcriptional regulator low > 80
Ralstonia solanacearum PSI07 0.18 RPSI07_RS23505 5-formyltetrahydrofolate cyclo-ligase 0.46 RPSI07_RS17385 CysB family HTH-type transcriptional regulator low > 81
Ralstonia solanacearum IBSBF1503 0.17 RALBFv3_RS09865 5-formyltetrahydrofolate cyclo-ligase 0.46 RALBFv3_RS00100 CysB family HTH-type transcriptional regulator low > 76
Ralstonia solanacearum UW163 0.17 UW163_RS03715 5-formyltetrahydrofolate cyclo-ligase 0.46 UW163_RS13430 CysB family HTH-type transcriptional regulator — —
Ralstonia solanacearum GMI1000 0.16 RS_RS00450 5-formyltetrahydrofolate cyclo-ligase 0.46 RS_RS06760 CysB family HTH-type transcriptional regulator 0.50 12
Cupriavidus basilensis FW507-4G11 0.16 RR42_RS01400 5-formyltetrahydrofolate cyclo-ligase 0.45 RR42_RS12245 transcriptional regulator low > 128
Dechlorosoma suillum PS 0.14 Dsui_0682 5,10-methenyltetrahydrofolate synthetase 0.52 Dsui_1988 transcriptional regulator — —

Not shown: 7 genomes with orthologs for PP_5203 only; 16 genomes with orthologs for PP_2327 only