| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas putida KT2440 | 1.0 | PP_2214 | | 3-hydroxyacyl-CoA dehydrogenase type-2 | 1.0 | PP_1319 | | Ubiquinol--cytochrome c reductase, cytochrome c1 | 0.30 | 11 |
| Pseudomonas fluorescens SBW25-INTG | 0.80 | PFLU_RS14760 | | SDR family NAD(P)-dependent oxidoreductase | 0.85 | PFLU_RS04205 | | cytochrome c1 | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.80 | PFLU_RS14760 | | SDR family NAD(P)-dependent oxidoreductase | 0.85 | PFLU_RS04205 | | cytochrome c1 | low | > 109 |
| Pseudomonas sp. RS175 | 0.76 | PFR28_01881 | | putative oxidoreductase | 0.90 | PFR28_03604 | | Ammonia monooxygenase gamma subunit | — | — |
| Pseudomonas simiae WCS417 | 0.75 | PS417_13860 | | 3-hydroxy-2-methylbutyryl-CoA dehydrogenase | 0.85 | PS417_04165 | | cytochrome C | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.74 | PfGW456L13_2981 | | Probable acyl-CoA dehydrogenase (EC 1.3.99.3) | 0.90 | PfGW456L13_1636 | | ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.74 | Pf6N2E2_1144 | | Probable acyl-CoA dehydrogenase (EC 1.3.99.3) | 0.89 | Pf6N2E2_5339 | | ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.74 | AO353_25690 | | 3-hydroxy-2-methylbutyryl-CoA dehydrogenase | 0.87 | AO353_15255 | | cytochrome C | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.73 | AO356_26345 | | 3-hydroxy-2-methylbutyryl-CoA dehydrogenase | 0.90 | AO356_17075 | | cytochrome C | low | > 104 |
| Pseudomonas fluorescens FW300-N1B4 | 0.72 | Pf1N1B4_4785 | | Probable acyl-CoA dehydrogenase (EC 1.3.99.3) | 0.88 | Pf1N1B4_960 | | ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit | — | — |
| Pseudomonas stutzeri RCH2 | 0.68 | Psest_2447 | | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) | 0.79 | Psest_3277 | | Cytochrome c1 | — | — |
| Pseudomonas sp. S08-1 | 0.67 | OH686_00865 | | 3-hydroxyacyl-CoA dehydrogenase or 17hydroxysteroid dehydrogenase type 10 (HSD10)-like | 0.89 | OH686_08380 | | Ubiquinol-cytochrome C reductase, cytochrome C1 subunit | — | — |
| Dechlorosoma suillum PS | 0.66 | Dsui_1624 | | dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein | 0.40 | Dsui_1814 | | cytochrome c1 | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.65 | H281DRAFT_06131 | | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | 0.37 | H281DRAFT_05671 | | ubiquinol-cytochrome c reductase cytochrome c1 subunit | — | — |
| Paraburkholderia graminis OAS925 | 0.64 | ABIE53_005415 | | NAD(P)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | 0.37 | ABIE53_003683 | | ubiquinol-cytochrome c reductase cytochrome c1 subunit | low | > 113 |
| Ralstonia sp. UNC404CL21Col | 0.62 | ABZR87_RS00745 | | 3-hydroxyacyl-CoA dehydrogenase | 0.39 | ABZR87_RS02375 | | cytochrome c1 | low | > 80 |
| Herbaspirillum seropedicae SmR1 | 0.61 | HSERO_RS04630 | | 3-hydroxy-2-methylbutyryl-CoA dehydrogenase | 0.37 | HSERO_RS20235 | | cytochrome C | low | > 78 |
| Burkholderia phytofirmans PsJN | 0.61 | BPHYT_RS15890 | | 3-hydroxy-2-methylbutyryl-CoA dehydrogenase | 0.36 | BPHYT_RS17620 | | cytochrome C | low | > 109 |
| Ralstonia solanacearum UW163 | 0.61 | UW163_RS08530 | | 3-hydroxyacyl-CoA dehydrogenase | 0.40 | UW163_RS06895 | | cytochrome c | — | — |
| Ralstonia solanacearum GMI1000 | 0.61 | RS_RS12705 | | 3-hydroxyacyl-CoA dehydrogenase | 0.40 | RS_RS14665 | | cytochrome c | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.61 | RALBFv3_RS05095 | | 3-hydroxyacyl-CoA dehydrogenase | 0.40 | RALBFv3_RS06720 | | cytochrome c | low | > 76 |
| Paraburkholderia sabiae LMG 24235 | 0.60 | QEN71_RS02810 | | 3-hydroxyacyl-CoA dehydrogenase | 0.35 | QEN71_RS27775 | | cytochrome c1 | — | — |
| Acidovorax sp. GW101-3H11 | 0.59 | Ac3H11_2606 | | 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) @ 17hydroxysteroid dehydrogenase type 10 (HSD10)-like | 0.32 | Ac3H11_4752 | | ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.59 | GFF3825 | | 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) @ 17hydroxysteroid dehydrogenase type 10 (HSD10)-like | 0.35 | GFF1293 | | ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit | low | > 90 |
| Cupriavidus basilensis FW507-4G11 | 0.59 | RR42_RS03440 | | 3-hydroxy-2-methylbutyryl-CoA dehydrogenase | 0.37 | RR42_RS18815 | | cytochrome C | low | > 128 |
| Ralstonia solanacearum PSI07 | 0.58 | RPSI07_RS12200 | | 3-hydroxyacyl-CoA dehydrogenase | 0.39 | RPSI07_RS10515 | | cytochrome c | low | > 81 |
| Variovorax sp. OAS795 | 0.58 | ABID97_RS10560 | | 3-hydroxyacyl-CoA dehydrogenase | 0.29 | ABID97_RS22975 | | cytochrome c1 | low | > 91 |
| Azospirillum sp. SherDot2 | 0.56 | MPMX19_02389 | | putative oxidoreductase | 0.13 | MPMX19_05014 | | Cytochrome c1 | low | > 112 |
| Dyella japonica UNC79MFTsu3.2 | 0.55 | ABZR86_RS08630 | | SDR family NAD(P)-dependent oxidoreductase | 0.37 | ABZR86_RS09870 | | cytochrome c1 | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.55 | OKGIIK_09370 | fabG | 3-hydroxyacyl-CoA dehydrogenase | 0.35 | OKGIIK_03015 | | cytochrome c1 | — | — |
| Rhodanobacter denitrificans MT42 | 0.54 | LRK55_RS02080 | | SDR family oxidoreductase | 0.35 | LRK55_RS13490 | | cytochrome c1 | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.54 | LRK54_RS02325 | | SDR family oxidoreductase | 0.35 | LRK54_RS13775 | | cytochrome c1 | — | — |
| Castellaniella sp019104865 MT123 | 0.54 | ABCV34_RS05365 | | 3-hydroxyacyl-CoA dehydrogenase | 0.33 | ABCV34_RS12625 | | cytochrome c1 | — | — |
| Marinobacter adhaerens HP15 | 0.53 | HP15_1007 | | 3-hydroxyacyl-CoA dehydrogenase type II | 0.51 | HP15_547 | | ubiquinol-cytochrome c reductase, cytochrome c1 | — | — |
| Lysobacter sp. OAE881 | 0.53 | ABIE51_RS13215 | | SDR family NAD(P)-dependent oxidoreductase | 0.41 | ABIE51_RS15430 | | cytochrome c1 | — | — |
| Alteromonas macleodii MIT1002 | 0.51 | MIT1002_01862 | | Levodione reductase | 0.48 | MIT1002_00816 | | Cytochrome c1 precursor | low | > 70 |
| Variovorax sp. SCN45 | 0.49 | GFF2281 | | Short-chain dehydrogenase/reductase SDR | 0.31 | GFF6696 | | Ubiquinol-cytochrome C reductase, cytochrome C1 subunit | low | > 127 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.49 | Xcc-8004.2924.1 | | Short-chain dehydrogenase/reductase SDR | 0.40 | Xcc-8004.2230.1 | | ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit | 0.54 | 30 |
| Kangiella aquimarina DSM 16071 | 0.48 | B158DRAFT_1000 | | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) | 0.42 | B158DRAFT_2102 | | Cytochrome c1 | — | — |
| Shewanella loihica PV-4 | 0.29 | Shew_1673 | fabG | 3-ketoacyl-(acyl-carrier-protein) reductase (RefSeq) | 0.45 | Shew_0572 | | cytochrome c1 (RefSeq) | — | — |
| Shewanella amazonensis SB2B | 0.29 | Sama_1381 | fabG | 3-ketoacyl-(acyl-carrier-protein) reductase (RefSeq) | 0.48 | Sama_3019 | | ubiquinol-cytochrome c reductase cytochrome c1 subunit (RefSeq) | low | > 62 |
| Shewanella sp. ANA-3 | 0.28 | Shewana3_2765 | fabG | 3-ketoacyl-(acyl-carrier-protein) reductase (RefSeq) | 0.48 | Shewana3_0603 | | cytochrome c1 (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.27 | SO1683 | | 3-hydroxy-2-methylbutyryl-CoA dehydrogenase IvdG (EC:1.1.1.178) (from data) | 0.48 | SO0610 | petC | ubiquinol-cytochrome c reductase, cytochrome c1 (NCBI ptt file) | low | > 76 |
Not shown: 17 genomes with orthologs for PP_2214 only; 1 genomes with orthologs for PP_1319 only