Conservation of cofitness between PP_4701 and PP_0366 in Pseudomonas putida KT2440

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4701 glucose-6-phosphate isomerase 1.0 PP_0366 dethiobiotin synthetase 0.18 12
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_14370 glucose-6-phosphate isomerase 0.77 AO353_07505 dethiobiotin synthetase 0.35 91
Pseudomonas simiae WCS417 0.90 PS417_23920 glucose-6-phosphate isomerase 0.76 PS417_25985 dethiobiotin synthetase — —
Pseudomonas fluorescens FW300-N1B4 0.90 Pf1N1B4_2850 Glucose-6-phosphate isomerase (EC 5.3.1.9) 0.78 Pf1N1B4_2491 Dethiobiotin synthetase (EC 6.3.3.3) low > 87
Pseudomonas fluorescens SBW25-INTG 0.90 PFLU_RS25760 glucose-6-phosphate isomerase 0.77 PFLU_RS27630 dethiobiotin synthase low > 109
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_1518 Glucose-6-phosphate isomerase (EC 5.3.1.9) 0.79 PfGW456L13_1151 Dethiobiotin synthetase (EC 6.3.3.3) — —
Pseudomonas fluorescens FW300-N2E2 0.90 Pf6N2E2_5150 Glucose-6-phosphate isomerase (EC 5.3.1.9) 0.77 Pf6N2E2_4764 Dethiobiotin synthetase (EC 6.3.3.3) low > 103
Pseudomonas fluorescens SBW25 0.90 PFLU_RS25760 glucose-6-phosphate isomerase 0.77 PFLU_RS27630 dethiobiotin synthase low > 109
Pseudomonas fluorescens FW300-N2C3 0.90 AO356_16050 glucose-6-phosphate isomerase 0.77 AO356_14155 dethiobiotin synthetase 0.43 70
Pseudomonas sp. RS175 0.90 PFR28_03724 Glucose-6-phosphate isomerase 0.77 PFR28_04099 ATP-dependent dethiobiotin synthetase BioD 1 — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.89 Psyr_0826 glucose-6-phosphate isomerase 0.72 Psyr_4683 dethiobiotin synthase 0.47 86
Pseudomonas syringae pv. syringae B728a 0.89 Psyr_0826 glucose-6-phosphate isomerase 0.72 Psyr_4683 dethiobiotin synthase low > 86
Pseudomonas sp. S08-1 0.84 OH686_17230 Glucose-6-phosphate isomerase 0.72 OH686_10335 dethiobiotin synthase — —
Pseudomonas stutzeri RCH2 0.78 Psest_0993 Glucose-6-phosphate isomerase 0.62 Psest_0415 dethiobiotin synthase low > 67
Marinobacter adhaerens HP15 0.57 HP15_322 glucose-6-phosphate isomerase 0.49 HP15_2482 dethiobiotin synthetase — —
Shewanella sp. ANA-3 0.56 Shewana3_3148 pgi glucose-6-phosphate isomerase (RefSeq) 0.51 Shewana3_2516 bioD dithiobiotin synthetase (RefSeq) — —
Shewanella oneidensis MR-1 0.55 SO3547 pgi glucose-6-phosphate isomerase (NCBI ptt file) 0.51 SO2737 bioD dethiobiotin synthase (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.55 Sama_0912 pgi glucose-6-phosphate isomerase (RefSeq) 0.42 Sama_1441 bioD dithiobiotin synthetase (RefSeq) — —
Alteromonas macleodii MIT1002 0.54 MIT1002_03081 Glucose-6-phosphate isomerase 0.40 MIT1002_01382 ATP-dependent dethiobiotin synthetase BioD 1 — —
Shewanella loihica PV-4 0.54 Shew_1088 pgi glucose-6-phosphate isomerase (RefSeq) 0.53 Shew_1722 dethiobiotin synthase (RefSeq) — —
Escherichia coli Nissle 1917 0.49 ECOLIN_RS23240 glucose-6-phosphate isomerase 0.44 ECOLIN_RS04145 dethiobiotin synthase — —
Escherichia coli BL21 0.49 ECD_03897 glucosephosphate isomerase 0.44 ECD_00745 dethiobiotin synthetase low > 60
Escherichia coli ECRC102 0.49 NIAGMN_10925 pgi glucose-6-phosphate isomerase 0.44 NIAGMN_04430 bioD dethiobiotin synthase — —
Escherichia coli BW25113 0.49 b4025 pgi glucose-6-phosphate isomerase (NCBI) 0.44 b0778 bioD dethiobiotin synthetase (NCBI) low > 76
Escherichia coli ECRC99 0.49 KEDOAH_14985 pgi glucose-6-phosphate isomerase 0.44 KEDOAH_21525 bioD dethiobiotin synthase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.49 GFF1396 Glucose-6-phosphate isomerase (EC 5.3.1.9) 0.42 GFF674 Dethiobiotin synthetase (EC 6.3.3.3) low > 78
Escherichia coli ECOR38 0.49 HEPCGN_11685 pgi glucose-6-phosphate isomerase 0.43 HEPCGN_01655 bioD dethiobiotin synthase low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.49 OHPLBJKB_04021 Glucose-6-phosphate isomerase 0.44 OHPLBJKB_02935 ATP-dependent dethiobiotin synthetase BioD 1 low > 73
Escherichia coli ECRC98 0.49 JDDGAC_16800 pgi glucose-6-phosphate isomerase 0.44 JDDGAC_10020 bioD dethiobiotin synthase — —
Escherichia coli ECRC101 0.49 OKFHMN_13175 pgi glucose-6-phosphate isomerase 0.44 OKFHMN_06385 bioD dethiobiotin synthase — —
Escherichia fergusonii Becca 0.49 EFB2_04577 Glucose-6-phosphate isomerase 0.44 EFB2_03327 ATP-dependent dethiobiotin synthetase BioD 1 low > 86
Escherichia coli ECRC101 0.49 MCAODC_03675 pgi glucose-6-phosphate isomerase 0.44 MCAODC_25600 bioD dethiobiotin synthase — —
Escherichia coli ECRC62 0.49 BNILDI_06185 pgi glucose-6-phosphate isomerase 0.43 BNILDI_21025 bioD dethiobiotin synthase — —
Klebsiella michiganensis M5al 0.49 BWI76_RS01800 glucose-6-phosphate isomerase 0.44 BWI76_RS08775 dethiobiotin synthase low > 92
Escherichia coli ECOR27 0.49 NOLOHH_05335 pgi glucose-6-phosphate isomerase 0.44 NOLOHH_22755 bioD dethiobiotin synthase low > 57
Enterobacter sp. TBS_079 0.49 MPMX20_00241 Glucose-6-phosphate isomerase 0.45 MPMX20_01406 ATP-dependent dethiobiotin synthetase BioD 1 low > 85
Enterobacter asburiae PDN3 0.49 EX28DRAFT_4318 Glucose-6-phosphate isomerase 0.46 EX28DRAFT_2213 dethiobiotin synthase low > 76
Pectobacterium carotovorum WPP14 0.49 HER17_RS02340 glucose-6-phosphate isomerase 0.44 HER17_RS13445 dethiobiotin synthase low > 75
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS05515 glucose-6-phosphate isomerase 0.37 HSERO_RS12255 dethiobiotin synthetase low > 78
Pontibacter actiniarum KMM 6156, DSM 19842 0.48 CA264_07470 glucose-6-phosphate isomerase 0.12 CA264_02415 dethiobiotin synthase low > 74
Rhodanobacter denitrificans MT42 0.47 LRK55_RS08520 glucose-6-phosphate isomerase 0.41 LRK55_RS06915 dethiobiotin synthase — —
Dechlorosoma suillum PS 0.46 Dsui_1239 glucose-6-phosphate isomerase 0.43 Dsui_2884 dethiobiotin synthase — —
Rhodanobacter denitrificans FW104-10B01 0.46 LRK54_RS08755 glucose-6-phosphate isomerase 0.41 LRK54_RS07180 dethiobiotin synthase — —
Rhodanobacter sp. FW510-T8 0.46 OKGIIK_15520 pgi glucose-6-phosphate isomerase 0.42 OKGIIK_16455 bioD dethiobiotin synthase low > 52
Ralstonia solanacearum UW163 0.46 UW163_RS14610 glucose-6-phosphate isomerase 0.35 UW163_RS14160 dethiobiotin synthase — —
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS01300 glucose-6-phosphate isomerase 0.35 RALBFv3_RS00825 dethiobiotin synthase — —
Cupriavidus basilensis FW507-4G11 0.45 RR42_RS09060 glucose-6-phosphate isomerase 0.28 RR42_RS00935 dethiobiotin synthetase — —
Rhizobium sp. OAE497 0.44 ABIE40_RS02150 glucose-6-phosphate isomerase 0.15 ABIE40_RS21065 dethiobiotin synthase — —
Agrobacterium fabrum C58 0.44 Atu0404 glucose-6-phosphate isomerase 0.14 Atu3999 dithiobiotin synthetase — —
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS09500 glucose-6-phosphate isomerase 0.37 BPHYT_RS02155 dithiobiotin synthetase low > 109
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS21935 glucose-6-phosphate isomerase 0.32 QEN71_RS01090 dethiobiotin synthase — —
Paraburkholderia bryophila 376MFSha3.1 0.43 H281DRAFT_00906 glucose-6-phosphate isomerase 0.34 H281DRAFT_02096 dethiobiotin synthetase — —
Acidovorax sp. GW101-3H11 0.40 Ac3H11_2077 Glucose-6-phosphate isomerase (EC 5.3.1.9) 0.35 Ac3H11_3829 Dethiobiotin synthetase (EC 6.3.3.3) — —
Variovorax sp. SCN45 0.39 GFF5267 Glucose-6-phosphate isomerase (EC 5.3.1.9) 0.36 GFF143 Dethiobiotin synthase BioD (EC 6.3.3.3) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.38 GFF5497 Glucose-6-phosphate isomerase (EC 5.3.1.9) 0.42 GFF3994 Dethiobiotin synthetase (EC 6.3.3.3) — —
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS00830 glucose-6-phosphate isomerase 0.46 ABZR86_RS12700 dethiobiotin synthase low > 74
Lysobacter sp. OAE881 0.30 ABIE51_RS08040 glucose-6-phosphate isomerase 0.42 ABIE51_RS17990 dethiobiotin synthase low > 62
Castellaniella sp019104865 MT123 0.29 ABCV34_RS11120 glucose-6-phosphate isomerase 0.14 ABCV34_RS15285 dethiobiotin synthase — —

Not shown: 11 genomes with orthologs for PP_4701 only; 25 genomes with orthologs for PP_0366 only