Conservation of cofitness between PFLU_RS02430 and PFLU_RS26535 in Pseudomonas fluorescens SBW25

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens SBW25 1.0 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC 1.0 PFLU_RS26535 thiamine phosphate synthase 0.85 5
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC 1.00 PFLU_RS26535 thiamine phosphate synthase 0.88 3
Pseudomonas simiae WCS417 0.98 PS417_02355 thiamine biosynthesis protein ThiC 0.98 PS417_24605 thiamine-phosphate pyrophosphorylase 0.42 5
Pseudomonas fluorescens FW300-N2E3 0.95 AO353_13010 thiamine biosynthesis protein ThiC 0.88 AO353_06355 thiamine-phosphate pyrophosphorylase 0.57 12
Pseudomonas syringae pv. syringae B728a ΔmexB 0.95 Psyr_0544 hydroxymethylpyrimidine synthase 0.79 Psyr_4341 thiamine-phosphate diphosphorylase low > 86
Pseudomonas syringae pv. syringae B728a 0.95 Psyr_0544 hydroxymethylpyrimidine synthase 0.79 Psyr_4341 thiamine-phosphate diphosphorylase low > 86
Pseudomonas fluorescens FW300-N2E2 0.95 Pf6N2E2_3644 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.87 Pf6N2E2_5023 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 0.64 2
Pseudomonas fluorescens FW300-N2C3 0.94 AO356_08810 thiamine biosynthesis protein ThiC 0.87 AO356_15430 thiamine-phosphate pyrophosphorylase 0.53 1
Pseudomonas fluorescens FW300-N1B4 0.94 Pf1N1B4_1447 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.87 Pf1N1B4_2717 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) — —
Pseudomonas sp. RS175 0.94 PFR28_05091 Phosphomethylpyrimidine synthase 0.88 PFR28_03844 Thiamine-phosphate synthase 0.92 3
Pseudomonas fluorescens GW456-L13 0.94 PfGW456L13_187 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.84 PfGW456L13_1384 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 0.72 3
Pseudomonas putida KT2440 0.91 PP_4922 Phosphomethylpyrimidine synthase 0.82 PP_4783 Thiamine-phosphate synthase — —
Pseudomonas sp. S08-1 0.89 OH686_15885 phosphomethylpyrimidine synthase 0.69 OH686_09190 Thiamin-phosphate pyrophosphorylase 0.75 62
Pseudomonas stutzeri RCH2 0.89 Psest_0477 thiamine biosynthesis protein ThiC 0.68 Psest_0536 thiamine-phosphate pyrophosphorylase 0.85 3
Marinobacter adhaerens HP15 0.80 HP15_453 thiamine biosynthesis protein thiC 0.44 HP15_348 thiamine-phosphate pyrophosphorylase — —
Herbaspirillum seropedicae SmR1 0.76 HSERO_RS02120 phosphomethylpyrimidine synthase ThiC 0.33 HSERO_RS02140 thiamine-phosphate synthase 0.59 5
Dyella japonica UNC79MFTsu3.2 0.75 ABZR86_RS17230 phosphomethylpyrimidine synthase ThiC 0.37 ABZR86_RS17410 thiamine phosphate synthase — —
Dechlorosoma suillum PS 0.75 Dsui_0422 thiamine biosynthesis protein ThiC 0.34 Dsui_0663 thiamine-phosphate pyrophosphorylase — —
Castellaniella sp019104865 MT123 0.75 ABCV34_RS10825 phosphomethylpyrimidine synthase ThiC 0.33 ABCV34_RS10745 thiamine phosphate synthase — —
Lysobacter sp. OAE881 0.74 ABIE51_RS17515 phosphomethylpyrimidine synthase ThiC 0.43 ABIE51_RS17410 thiamine phosphate synthase — —
Rhodanobacter sp. FW510-T8 0.74 OKGIIK_16965 thiC phosphomethylpyrimidine synthase ThiC 0.36 OKGIIK_17095 Thiamine-phosphate synthase low > 52
Acinetobacter radioresistens SK82 0.74 MPMX26_00180 Phosphomethylpyrimidine synthase 0.39 MPMX26_01022 Thiamine-phosphate synthase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.74 CA264_20435 phosphomethylpyrimidine synthase ThiC 0.17 CA264_20425 thiamine phosphate synthase 0.85 1
Pectobacterium carotovorum WPP14 0.72 HER17_RS20380 phosphomethylpyrimidine synthase ThiC 0.17 HER17_RS20385 thiamine phosphate synthase 0.96 3
Echinicola vietnamensis KMM 6221, DSM 17526 0.72 Echvi_3567 thiamine biosynthesis protein ThiC 0.23 Echvi_0216 thiamine-phosphate pyrophosphorylase low > 79
Dickeya dadantii 3937 0.72 DDA3937_RS01175 phosphomethylpyrimidine synthase ThiC 0.18 DDA3937_RS01170 thiamine phosphate synthase 0.95 2
Rahnella sp. WP5 0.71 EX31_RS16815 phosphomethylpyrimidine synthase ThiC 0.15 EX31_RS16810 thiamine phosphate synthase low > 89
Escherichia fergusonii Becca 0.71 EFB2_04617 Phosphomethylpyrimidine synthase 0.18 EFB2_04618 Thiamine-phosphate synthase low > 86
Escherichia coli ECRC100 0.71 OKFHMN_13375 thiC phosphomethylpyrimidine synthase ThiC 0.18 OKFHMN_13380 thiE thiamine phosphate synthase 0.96 3
Escherichia coli ECRC62 0.71 BNILDI_06005 thiC phosphomethylpyrimidine synthase ThiC 0.18 BNILDI_06000 thiE thiamine phosphate synthase 0.87 20
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_04056 Phosphomethylpyrimidine synthase 0.17 OHPLBJKB_04057 Thiamine-phosphate synthase low > 73
Escherichia coli Nissle 1917 0.71 ECOLIN_RS23040 phosphomethylpyrimidine synthase ThiC 0.17 ECOLIN_RS23035 thiamine phosphate synthase 0.88 1
Escherichia coli BW25113 0.71 b3994 thiC thiamine biosynthesis protein ThiC (NCBI) 0.18 b3993 thiE thiamine-phosphate pyrophosphorylase (NCBI) 0.93 3
Escherichia coli ECRC98 0.71 JDDGAC_17000 thiC phosphomethylpyrimidine synthase ThiC 0.18 JDDGAC_17005 thiE thiamine phosphate synthase low > 86
Escherichia coli ECRC99 0.71 KEDOAH_14785 thiC phosphomethylpyrimidine synthase ThiC 0.18 KEDOAH_14780 thiE thiamine phosphate synthase — —
Escherichia coli ECRC102 0.71 NIAGMN_11125 thiC phosphomethylpyrimidine synthase ThiC 0.18 NIAGMN_11130 thiE thiamine phosphate synthase — —
Escherichia coli ECRC101 0.71 MCAODC_03875 thiC phosphomethylpyrimidine synthase ThiC 0.18 MCAODC_03880 thiE thiamine phosphate synthase 0.94 3
Escherichia coli ECOR27 0.71 NOLOHH_05520 thiC phosphomethylpyrimidine synthase ThiC 0.18 NOLOHH_05525 thiE thiamine phosphate synthase 0.96 1
Enterobacter asburiae PDN3 0.71 EX28DRAFT_4536 phosphomethylpyrimidine synthase 0.18 EX28DRAFT_4535 thiamine-phosphate diphosphorylase low > 76
Escherichia coli BL21 0.71 ECD_03871 phosphomethylpyrimidine synthase 0.18 ECD_03870 thiamine phosphate synthase (thiamine phosphate pyrophosphorylase) 0.57 20
Escherichia coli ECOR38 0.71 HEPCGN_12010 thiC phosphomethylpyrimidine synthase ThiC 0.18 HEPCGN_12015 thiE thiamine phosphate synthase 0.84 36
Pantoea sp. MT58 0.71 IAI47_18085 phosphomethylpyrimidine synthase ThiC 0.18 IAI47_18090 thiamine phosphate synthase 0.62 1
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF4198 Thiamin biosynthesis protein ThiC 0.19 GFF4199 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 0.34 12
Enterobacter sp. TBS_079 0.70 MPMX20_00217 Phosphomethylpyrimidine synthase 0.19 MPMX20_00216 Thiamine-phosphate synthase 0.57 1
Dickeya dianthicola 67-19 0.70 HGI48_RS01170 phosphomethylpyrimidine synthase ThiC 0.17 HGI48_RS01165 thiamine phosphate synthase 0.84 19
Serratia liquefaciens MT49 0.70 IAI46_01320 phosphomethylpyrimidine synthase ThiC 0.17 IAI46_01315 thiamine phosphate synthase low > 86
Klebsiella michiganensis M5al 0.70 BWI76_RS01555 phosphomethylpyrimidine synthase ThiC 0.19 BWI76_RS01550 thiamine phosphate synthase 0.79 1
Dickeya dianthicola ME23 0.70 DZA65_RS01215 phosphomethylpyrimidine synthase ThiC 0.17 DZA65_RS01210 thiamine phosphate synthase 0.95 2
Erwinia tracheiphila SCR3 0.70 LU632_RS00970 thiC phosphomethylpyrimidine synthase ThiC 0.16 LU632_RS00965 thiE thiamine phosphate synthase low > 74
Magnetospirillum magneticum AMB-1 0.66 AMB_RS01125 phosphomethylpyrimidine synthase 0.29 AMB_RS14385 thiamine phosphate synthase — —
Azospirillum brasilense Sp245 0.65 AZOBR_RS07940 phosphomethylpyrimidine synthase 0.29 AZOBR_RS10400 thiamine-phosphate synthase — —
Caulobacter crescentus NA1000 0.64 CCNA_02109 thiamine biosynthesis protein thiC 0.25 CCNA_03373 thiamin-phosphate pyrophosphorylase — —
Caulobacter crescentus NA1000 Δfur 0.64 CCNA_02109 thiamine biosynthesis protein thiC 0.25 CCNA_03373 thiamin-phosphate pyrophosphorylase — —
Agrobacterium fabrum C58 0.64 Atu2569 thiamine biosynthesis protein 0.20 Atu3289 thiamine-phosphate pyrophosphorylase 0.88 4
Rhodopseudomonas palustris CGA009 0.64 TX73_018540 phosphomethylpyrimidine synthase ThiC 0.14 TX73_018535 thiamine phosphate synthase — —
Dinoroseobacter shibae DFL-12 0.63 Dshi_4080 thiamine biosynthesis protein ThiC (RefSeq) 0.16 Dshi_1514 thiamine monophosphate synthase (RefSeq) — —
Sinorhizobium meliloti 1021 0.63 SM_b20615 thiamine biosynthesis protein ThiC 0.17 SM_b20618 thiamine-phosphate pyrophosphorylase low > 103
Bosea sp. OAE506 0.63 ABIE41_RS02770 phosphomethylpyrimidine synthase ThiC 0.15 ABIE41_RS20180 thiamine phosphate synthase — —
Azospirillum sp. SherDot2 0.63 MPMX19_00336 Phosphomethylpyrimidine synthase 0.30 MPMX19_00683 Thiamine-phosphate synthase — —
Sphingomonas koreensis DSMZ 15582 0.63 Ga0059261_2424 hydroxymethylpyrimidine synthase 0.31 Ga0059261_0721 thiamine-phosphate diphosphorylase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.62 A4249_RS15715 phosphomethylpyrimidine synthase ThiC 0.28 A4249_RS08810 thiamine phosphate synthase — —
Rhodospirillum rubrum S1H 0.60 Rru_A2008 Thiamine biosynthesis protein ThiC (NCBI) 0.29 Rru_A1080 Thiamine-phosphate diphosphorylase (NCBI) — —
Bacteroides ovatus ATCC 8483 0.57 BACOVA_02358 thiamine biosynthesis protein ThiC 0.22 BACOVA_02360 thiamine-phosphate diphosphorylase 0.90 5
Bacteroides thetaiotaomicron VPI-5482 0.56 BT0650 thiamine biosynthesis protein ThiC (NCBI ptt file) 0.20 BT0652 putative thiamine-phosphate pyrophosphorylase (NCBI ptt file) 0.40 56
Bacteroides stercoris CC31F 0.56 HMPREF1181_RS14685 phosphomethylpyrimidine synthase ThiC 0.20 HMPREF1181_RS14675 thiamine phosphate synthase low > 56
Mycobacterium tuberculosis H37Rv 0.52 Rv0423c Probable thiamine biosynthesis protein ThiC 0.18 Rv0414c Thiamine-phosphate pyrophosphorylase ThiE (TMP pyrophosphorylase) (TMP-PPASE) (thiamine-phosphate synthase) — —

Not shown: 28 genomes with orthologs for PFLU_RS02430 only; 8 genomes with orthologs for PFLU_RS26535 only