Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Escherichia coli ECOR27 | 1.0 | NOLOHH_17620 | btuC | vitamin B12 ABC transporter permease BtuC | 1.0 | NOLOHH_17745 | ydiK | AI-2E family transporter YdiK | 0.73 | 2 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_02022 | | Vitamin B12 import system permease protein BtuC | 1.00 | OHPLBJKB_02036 | | Putative transport protein YdiK | low | > 73 |
Escherichia coli BW25113 | 0.99 | b1711 | btuC | vtamin B12-transporter permease (NCBI) | 1.00 | b1688 | ydiK | predicted inner membrane protein (NCBI) | low | > 76 |
Escherichia coli ECOR38 | 0.99 | HEPCGN_05465 | btuC | vitamin B12 ABC transporter permease BtuC | 1.00 | HEPCGN_05610 | ydiK | AI-2E family transporter YdiK | low | > 87 |
Escherichia coli BL21 | 0.99 | ECD_01680 | | vitamin B12 ABC transporter permease | 1.00 | ECD_01657 | | UPF0118 family inner membrane protein | — | — |
Escherichia coli ECRC102 | 0.99 | NIAGMN_00965 | btuC | vitamin B12 ABC transporter permease BtuC | 1.00 | NIAGMN_00840 | ydiK | AI-2E family transporter YdiK | — | — |
Escherichia coli ECRC98 | 0.99 | JDDGAC_01675 | btuC | vitamin B12 ABC transporter permease BtuC | 1.00 | JDDGAC_01800 | ydiK | AI-2E family transporter YdiK | low | > 86 |
Escherichia coli Nissle 1917 | 0.99 | ECOLIN_RS09560 | | vitamin B12 ABC transporter permease BtuC | 1.00 | ECOLIN_RS09435 | | AI-2E family transporter YdiK | — | — |
Escherichia coli ECRC100 | 0.99 | OKFHMN_27100 | btuC | vitamin B12 ABC transporter permease BtuC | 1.00 | OKFHMN_27225 | ydiK | AI-2E family transporter YdiK | low | > 80 |
Escherichia fergusonii Becca | 0.99 | EFB2_02280 | | Vitamin B12 import system permease protein BtuC | 1.00 | EFB2_02304 | | Putative transport protein YdiK | low | > 86 |
Escherichia coli ECRC101 | 0.99 | MCAODC_18310 | btuC | vitamin B12 ABC transporter permease BtuC | 1.00 | MCAODC_18185 | ydiK | AI-2E family transporter YdiK | low | > 87 |
Escherichia coli ECRC99 | 0.98 | KEDOAH_01010 | btuC | vitamin B12 ABC transporter permease BtuC | 1.00 | KEDOAH_00885 | ydiK | AI-2E family transporter YdiK | — | — |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.86 | GFF3529 | | Vitamin B12 ABC transporter, permease component BtuC | 0.87 | GFF3553 | | Putative membrane protein | low | > 78 |
Klebsiella michiganensis M5al | 0.84 | BWI76_RS17110 | | vitamin B12 ABC transporter permease BtuC | 0.78 | BWI76_RS17055 | | hypothetical protein | low | > 92 |
Enterobacter sp. TBS_079 | 0.77 | MPMX20_01902 | | Vitamin B12 import system permease protein BtuC | 0.80 | MPMX20_01925 | | Putative transport protein YdiK | low | > 85 |
Enterobacter asburiae PDN3 | 0.77 | EX28DRAFT_1718 | | ABC-type cobalamin transport system, permease component | 0.79 | EX28DRAFT_1697 | | Predicted permease | low | > 76 |
Pantoea sp. MT58 | 0.65 | IAI47_10945 | | vitamin B12 ABC transporter permease BtuC | 0.66 | IAI47_10895 | | AI-2E family transporter YdiK | low | > 76 |
Serratia liquefaciens MT49 | 0.64 | IAI46_11000 | | vitamin B12 ABC transporter permease BtuC | 0.65 | IAI46_11125 | | AI-2E family transporter YdiK | low | > 86 |
Dickeya dianthicola 67-19 | 0.64 | HGI48_RS13035 | | vitamin B12 ABC transporter permease BtuC | 0.63 | HGI48_RS12865 | | AI-2E family transporter YdiK | low | > 71 |
Pectobacterium carotovorum WPP14 | 0.64 | HER17_RS08820 | | vitamin B12 ABC transporter permease BtuC | 0.64 | HER17_RS08900 | | AI-2E family transporter YdiK | low | > 75 |
Dickeya dianthicola ME23 | 0.63 | DZA65_RS13500 | | vitamin B12 ABC transporter permease BtuC | 0.63 | DZA65_RS13330 | | AI-2E family transporter YdiK | 0.36 | 65 |
Dickeya dadantii 3937 | 0.63 | DDA3937_RS12965 | | vitamin B12 ABC transporter permease BtuC | 0.63 | DDA3937_RS12800 | | AI-2E family transporter YdiK | low | > 74 |
Rahnella sp. WP5 | 0.62 | EX31_RS14035 | | vitamin B12 ABC transporter permease BtuC | 0.66 | EX31_RS13930 | | AI-2E family transporter YdiK | low | > 89 |
Vibrio cholerae E7946 ATCC 55056 | 0.38 | CSW01_06285 | | vitamin B12 ABC transporter permease BtuC | 0.16 | CSW01_03285 | | AI-2E family transporter | low | > 62 |
Rhizobium sp. OAE497 | 0.36 | ABIE40_RS14430 | | iron ABC transporter permease | 0.20 | ABIE40_RS23785 | | AI-2E family transporter | low | > 107 |
Pseudomonas fluorescens SBW25-INTG | 0.34 | PFLU_RS25690 | | iron ABC transporter permease | 0.27 | PFLU_RS09095 | | AI-2E family transporter | low | > 109 |
Pseudomonas fluorescens SBW25 | 0.34 | PFLU_RS25690 | | iron ABC transporter permease | 0.27 | PFLU_RS09095 | | AI-2E family transporter | low | > 109 |
Pseudomonas simiae WCS417 | 0.34 | PS417_23850 | | ABC transporter permease | 0.26 | PS417_09040 | | hypothetical protein | low | > 88 |
Pseudomonas fluorescens FW300-N2E2 | 0.34 | Pf6N2E2_5165 | | Hemin ABC transporter, permease protein | 0.25 | Pf6N2E2_5882 | | Putative membrane protein | low | > 103 |
Pseudomonas fluorescens FW300-N2E3 | 0.32 | AO353_14445 | | ABC transporter permease | 0.23 | AO353_01690 | | hypothetical protein | low | > 101 |
Pseudomonas fluorescens FW300-N1B4 | 0.32 | Pf1N1B4_2867 | | Hemin ABC transporter, permease protein | 0.24 | Pf1N1B4_3528 | | Putative membrane protein | low | > 87 |
Sinorhizobium meliloti 1021 | 0.31 | SMc01511 | | hemin transport system permease transmembrane protein | 0.20 | SMa0665 | | hypothetical protein | low | > 103 |
Pseudomonas sp. RS175 | 0.31 | PFR28_03709 | | Hemin transport system permease protein HmuU | 0.26 | PFR28_03068 | | Putative transport protein YdiK | low | > 88 |
Erwinia tracheiphila SCR3 | 0.30 | LU632_RS20345 | | iron ABC transporter permease | 0.68 | LU632_RS11035 | ydiK | AI-2E family transporter YdiK | low | > 74 |
Pseudomonas stutzeri RCH2 | 0.29 | Psest_1024 | | ABC-type Fe3+-siderophore transport system, permease component | 0.22 | Psest_2464 | | Predicted permease | low | > 67 |
Pseudomonas fluorescens FW300-N2C3 | 0.29 | AO356_16120 | | ABC transporter permease | 0.26 | AO356_19830 | | hypothetical protein | low | > 104 |
Shewanella sp. ANA-3 | 0.28 | Shewana3_3240 | | transport system permease protein (RefSeq) | 0.21 | Shewana3_2910 | | hypothetical protein (RefSeq) | low | > 73 |
Agrobacterium fabrum C58 | 0.27 | Atu2459 | | ABC transporter, membrane spanning protein (hemin) | 0.10 | Atu1739 | | permease | low | > 89 |
Pseudomonas fluorescens GW456-L13 | 0.26 | PfGW456L13_80 | | ABC transporter (iron.B12.siderophore.hemin) , permease component | 0.24 | PfGW456L13_2055 | | Putative membrane protein | low | > 87 |
Shewanella oneidensis MR-1 | 0.26 | SO3674 | hmuU | hemin ABC transporter, permease protein (NCBI ptt file) | 0.11 | SO0472 | | membrane protein, putative (NCBI ptt file) | low | > 76 |
Pseudomonas sp. S08-1 | 0.25 | OH686_17300 | | Heme ABC transporter, permease protein HmuU | 0.21 | OH686_01920 | | Uncharacterized UPF0118 membrane protein | low | > 80 |
Acidovorax sp. GW101-3H11 | 0.25 | Ac3H11_227 | | Hemin ABC transporter, permease protein | 0.12 | Ac3H11_2468 | | membrane protein, putative | low | > 79 |
Ralstonia sp. UNC404CL21Col | 0.25 | ABZR87_RS00090 | | iron ABC transporter permease | 0.10 | ABZR87_RS08310 | | AI-2E family transporter | low | > 80 |
Pseudomonas putida KT2440 | 0.25 | PP_4688 | | Heme/hemin ABC transporter, permease protein | 0.25 | PP_4162 | | conserved membrane protein of unknown function | low | > 96 |
Cupriavidus basilensis FW507-4G11 | 0.25 | RR42_RS16135 | | ABC transporter permease | 0.24 | RR42_RS03900 | | membrane protein | low | > 128 |
Marinobacter adhaerens HP15 | 0.25 | HP15_3955 | | bacterial transport system permease protein | 0.10 | HP15_593 | | protein belonging to uncharacterized protein family UPF0118 | low | > 73 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.24 | Psyr_3095 | | transport system permease protein | 0.27 | Psyr_2029 | | Protein of unknown function UPF0118 | low | > 86 |
Pseudomonas syringae pv. syringae B728a | 0.24 | Psyr_3095 | | transport system permease protein | 0.27 | Psyr_2029 | | Protein of unknown function UPF0118 | low | > 86 |
Phocaeicola vulgatus CL09T03C04 | 0.24 | HMPREF1058_RS01565 | | iron ABC transporter permease | 0.09 | HMPREF1058_RS14815 | | AI-2E family transporter | low | > 67 |
Phocaeicola dorei CL03T12C01 | 0.24 | ABI39_RS15500 | | iron ABC transporter permease | 0.09 | ABI39_RS10530 | | AI-2E family transporter | low | > 72 |
Dechlorosoma suillum PS | 0.22 | Dsui_0530 | | ABC-type Fe3+-siderophore transport system, permease component | 0.20 | Dsui_0423 | | putative permease | low | > 51 |
Burkholderia phytofirmans PsJN | 0.22 | BPHYT_RS04855 | | iron ABC transporter | 0.21 | BPHYT_RS06810 | | membrane protein | low | > 109 |
Azospirillum brasilense Sp245 | 0.21 | AZOBR_RS19150 | | ABC transporter permease | 0.15 | AZOBR_RS27390 | | transporter | low | > 97 |
Castellaniella sp019104865 MT123 | 0.20 | ABCV34_RS11140 | | iron ABC transporter permease | 0.10 | ABCV34_RS06025 | | AI-2E family transporter | low | > 48 |
Variovorax sp. SCN45 | 0.20 | GFF2821 | | Hemin ABC transporter, permease protein | 0.11 | GFF1804 | | Uncharacterized UPF0118 membrane protein | low | > 127 |
Desulfovibrio vulgaris Hildenborough JW710 | 0.20 | DVU0649 | | iron compound ABC transporter, permease protein (TIGR) | 0.10 | DVU1189 | | conserved hypothetical protein (TIGR) | low | > 55 |
Variovorax sp. OAS795 | 0.18 | ABID97_RS17405 | | iron ABC transporter permease | 0.13 | ABID97_RS22290 | | AI-2E family transporter | — | — |
Desulfovibrio vulgaris Miyazaki F | 0.16 | DvMF_1497 | | transport system permease protein (RefSeq) | 0.09 | DvMF_3082 | | protein of unknown function UPF0118 (RefSeq) | low | > 51 |
Not shown: 24 genomes with orthologs for NOLOHH_17620 only; 8 genomes with orthologs for NOLOHH_17745 only