Conservation of cofitness between NOLOHH_17620 and NOLOHH_17745 in Escherichia coli ECOR27

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR27 1.0 NOLOHH_17620 btuC vitamin B12 ABC transporter permease BtuC 1.0 NOLOHH_17745 ydiK AI-2E family transporter YdiK 0.73 2
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02022 Vitamin B12 import system permease protein BtuC 1.00 OHPLBJKB_02036 Putative transport protein YdiK low > 73
Escherichia coli BW25113 0.99 b1711 btuC vtamin B12-transporter permease (NCBI) 1.00 b1688 ydiK predicted inner membrane protein (NCBI) low > 76
Escherichia coli ECOR38 0.99 HEPCGN_05465 btuC vitamin B12 ABC transporter permease BtuC 1.00 HEPCGN_05610 ydiK AI-2E family transporter YdiK low > 87
Escherichia coli BL21 0.99 ECD_01680 vitamin B12 ABC transporter permease 1.00 ECD_01657 UPF0118 family inner membrane protein
Escherichia coli ECRC102 0.99 NIAGMN_00965 btuC vitamin B12 ABC transporter permease BtuC 1.00 NIAGMN_00840 ydiK AI-2E family transporter YdiK
Escherichia coli ECRC98 0.99 JDDGAC_01675 btuC vitamin B12 ABC transporter permease BtuC 1.00 JDDGAC_01800 ydiK AI-2E family transporter YdiK low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS09560 vitamin B12 ABC transporter permease BtuC 1.00 ECOLIN_RS09435 AI-2E family transporter YdiK
Escherichia coli ECRC100 0.99 OKFHMN_27100 btuC vitamin B12 ABC transporter permease BtuC 1.00 OKFHMN_27225 ydiK AI-2E family transporter YdiK low > 80
Escherichia fergusonii Becca 0.99 EFB2_02280 Vitamin B12 import system permease protein BtuC 1.00 EFB2_02304 Putative transport protein YdiK low > 86
Escherichia coli ECRC101 0.99 MCAODC_18310 btuC vitamin B12 ABC transporter permease BtuC 1.00 MCAODC_18185 ydiK AI-2E family transporter YdiK low > 87
Escherichia coli ECRC99 0.98 KEDOAH_01010 btuC vitamin B12 ABC transporter permease BtuC 1.00 KEDOAH_00885 ydiK AI-2E family transporter YdiK
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF3529 Vitamin B12 ABC transporter, permease component BtuC 0.87 GFF3553 Putative membrane protein low > 78
Klebsiella michiganensis M5al 0.84 BWI76_RS17110 vitamin B12 ABC transporter permease BtuC 0.78 BWI76_RS17055 hypothetical protein low > 92
Enterobacter sp. TBS_079 0.77 MPMX20_01902 Vitamin B12 import system permease protein BtuC 0.80 MPMX20_01925 Putative transport protein YdiK low > 85
Enterobacter asburiae PDN3 0.77 EX28DRAFT_1718 ABC-type cobalamin transport system, permease component 0.79 EX28DRAFT_1697 Predicted permease low > 76
Pantoea sp. MT58 0.65 IAI47_10945 vitamin B12 ABC transporter permease BtuC 0.66 IAI47_10895 AI-2E family transporter YdiK low > 76
Serratia liquefaciens MT49 0.64 IAI46_11000 vitamin B12 ABC transporter permease BtuC 0.65 IAI46_11125 AI-2E family transporter YdiK low > 86
Dickeya dianthicola 67-19 0.64 HGI48_RS13035 vitamin B12 ABC transporter permease BtuC 0.63 HGI48_RS12865 AI-2E family transporter YdiK low > 71
Pectobacterium carotovorum WPP14 0.64 HER17_RS08820 vitamin B12 ABC transporter permease BtuC 0.64 HER17_RS08900 AI-2E family transporter YdiK low > 75
Dickeya dianthicola ME23 0.63 DZA65_RS13500 vitamin B12 ABC transporter permease BtuC 0.63 DZA65_RS13330 AI-2E family transporter YdiK 0.36 65
Dickeya dadantii 3937 0.63 DDA3937_RS12965 vitamin B12 ABC transporter permease BtuC 0.63 DDA3937_RS12800 AI-2E family transporter YdiK low > 74
Rahnella sp. WP5 0.62 EX31_RS14035 vitamin B12 ABC transporter permease BtuC 0.66 EX31_RS13930 AI-2E family transporter YdiK low > 89
Vibrio cholerae E7946 ATCC 55056 0.38 CSW01_06285 vitamin B12 ABC transporter permease BtuC 0.16 CSW01_03285 AI-2E family transporter low > 62
Rhizobium sp. OAE497 0.36 ABIE40_RS14430 iron ABC transporter permease 0.20 ABIE40_RS23785 AI-2E family transporter low > 107
Pseudomonas fluorescens SBW25-INTG 0.34 PFLU_RS25690 iron ABC transporter permease 0.27 PFLU_RS09095 AI-2E family transporter low > 109
Pseudomonas fluorescens SBW25 0.34 PFLU_RS25690 iron ABC transporter permease 0.27 PFLU_RS09095 AI-2E family transporter low > 109
Pseudomonas simiae WCS417 0.34 PS417_23850 ABC transporter permease 0.26 PS417_09040 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_5165 Hemin ABC transporter, permease protein 0.25 Pf6N2E2_5882 Putative membrane protein low > 103
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_14445 ABC transporter permease 0.23 AO353_01690 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_2867 Hemin ABC transporter, permease protein 0.24 Pf1N1B4_3528 Putative membrane protein low > 87
Sinorhizobium meliloti 1021 0.31 SMc01511 hemin transport system permease transmembrane protein 0.20 SMa0665 hypothetical protein low > 103
Pseudomonas sp. RS175 0.31 PFR28_03709 Hemin transport system permease protein HmuU 0.26 PFR28_03068 Putative transport protein YdiK low > 88
Erwinia tracheiphila SCR3 0.30 LU632_RS20345 iron ABC transporter permease 0.68 LU632_RS11035 ydiK AI-2E family transporter YdiK low > 74
Pseudomonas stutzeri RCH2 0.29 Psest_1024 ABC-type Fe3+-siderophore transport system, permease component 0.22 Psest_2464 Predicted permease low > 67
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_16120 ABC transporter permease 0.26 AO356_19830 hypothetical protein low > 104
Shewanella sp. ANA-3 0.28 Shewana3_3240 transport system permease protein (RefSeq) 0.21 Shewana3_2910 hypothetical protein (RefSeq) low > 73
Agrobacterium fabrum C58 0.27 Atu2459 ABC transporter, membrane spanning protein (hemin) 0.10 Atu1739 permease low > 89
Pseudomonas fluorescens GW456-L13 0.26 PfGW456L13_80 ABC transporter (iron.B12.siderophore.hemin) , permease component 0.24 PfGW456L13_2055 Putative membrane protein low > 87
Shewanella oneidensis MR-1 0.26 SO3674 hmuU hemin ABC transporter, permease protein (NCBI ptt file) 0.11 SO0472 membrane protein, putative (NCBI ptt file) low > 76
Pseudomonas sp. S08-1 0.25 OH686_17300 Heme ABC transporter, permease protein HmuU 0.21 OH686_01920 Uncharacterized UPF0118 membrane protein low > 80
Acidovorax sp. GW101-3H11 0.25 Ac3H11_227 Hemin ABC transporter, permease protein 0.12 Ac3H11_2468 membrane protein, putative low > 79
Ralstonia sp. UNC404CL21Col 0.25 ABZR87_RS00090 iron ABC transporter permease 0.10 ABZR87_RS08310 AI-2E family transporter low > 80
Pseudomonas putida KT2440 0.25 PP_4688 Heme/hemin ABC transporter, permease protein 0.25 PP_4162 conserved membrane protein of unknown function low > 96
Cupriavidus basilensis FW507-4G11 0.25 RR42_RS16135 ABC transporter permease 0.24 RR42_RS03900 membrane protein low > 128
Marinobacter adhaerens HP15 0.25 HP15_3955 bacterial transport system permease protein 0.10 HP15_593 protein belonging to uncharacterized protein family UPF0118 low > 73
Pseudomonas syringae pv. syringae B728a ΔmexB 0.24 Psyr_3095 transport system permease protein 0.27 Psyr_2029 Protein of unknown function UPF0118 low > 86
Pseudomonas syringae pv. syringae B728a 0.24 Psyr_3095 transport system permease protein 0.27 Psyr_2029 Protein of unknown function UPF0118 low > 86
Phocaeicola vulgatus CL09T03C04 0.24 HMPREF1058_RS01565 iron ABC transporter permease 0.09 HMPREF1058_RS14815 AI-2E family transporter low > 67
Phocaeicola dorei CL03T12C01 0.24 ABI39_RS15500 iron ABC transporter permease 0.09 ABI39_RS10530 AI-2E family transporter low > 72
Dechlorosoma suillum PS 0.22 Dsui_0530 ABC-type Fe3+-siderophore transport system, permease component 0.20 Dsui_0423 putative permease low > 51
Burkholderia phytofirmans PsJN 0.22 BPHYT_RS04855 iron ABC transporter 0.21 BPHYT_RS06810 membrane protein low > 109
Azospirillum brasilense Sp245 0.21 AZOBR_RS19150 ABC transporter permease 0.15 AZOBR_RS27390 transporter low > 97
Castellaniella sp019104865 MT123 0.20 ABCV34_RS11140 iron ABC transporter permease 0.10 ABCV34_RS06025 AI-2E family transporter low > 48
Variovorax sp. SCN45 0.20 GFF2821 Hemin ABC transporter, permease protein 0.11 GFF1804 Uncharacterized UPF0118 membrane protein low > 127
Desulfovibrio vulgaris Hildenborough JW710 0.20 DVU0649 iron compound ABC transporter, permease protein (TIGR) 0.10 DVU1189 conserved hypothetical protein (TIGR) low > 55
Variovorax sp. OAS795 0.18 ABID97_RS17405 iron ABC transporter permease 0.13 ABID97_RS22290 AI-2E family transporter
Desulfovibrio vulgaris Miyazaki F 0.16 DvMF_1497 transport system permease protein (RefSeq) 0.09 DvMF_3082 protein of unknown function UPF0118 (RefSeq) low > 51

Not shown: 24 genomes with orthologs for NOLOHH_17620 only; 8 genomes with orthologs for NOLOHH_17745 only