Conservation of cofitness between NOLOHH_06505 and NOLOHH_04715 in Escherichia coli ECOR27

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR27 1.0 NOLOHH_06505 rarD EamA family transporter RarD 1.0 NOLOHH_04715 dsbD protein-disulfide reductase DsbD 0.61 15
Escherichia coli ECRC62 1.00 BNILDI_05025 rarD EamA family transporter RarD 0.99 BNILDI_06775 dsbD protein-disulfide reductase DsbD low > 75
Escherichia coli ECRC99 1.00 KEDOAH_13775 rarD EamA family transporter RarD 0.99 KEDOAH_15715 dsbD protein-disulfide reductase DsbD — —
Escherichia coli ECRC98 1.00 JDDGAC_18000 rarD EamA family transporter RarD 0.99 JDDGAC_16085 dsbD protein-disulfide reductase DsbD low > 86
Escherichia coli ECRC102 1.00 NIAGMN_12130 rarD EamA family transporter RarD 0.99 NIAGMN_10295 dsbD protein-disulfide reductase DsbD — —
Escherichia coli ECRC100 1.00 OKFHMN_14375 rarD EamA family transporter RarD 0.99 OKFHMN_12450 dsbD protein-disulfide reductase DsbD low > 80
Escherichia coli ECOR38 0.99 HEPCGN_13075 rarD EamA family transporter RarD 0.99 HEPCGN_10675 dsbD protein-disulfide reductase DsbD low > 87
Escherichia coli BL21 0.99 ECD_03698 putative chloramphenical resistance permease 0.99 ECD_04006 thiol:disulfide interchange protein and activator of DsbC low > 61
Escherichia coli BW25113 0.99 b3819 rarD predicted chloramphenical resistance permease (NCBI) 0.99 b4136 dipZ thiol:disulfide interchange protein precursor (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_04232 Protein RarD 1.00 OHPLBJKB_03907 Thiol:disulfide interchange protein DsbD low > 73
Escherichia coli ECRC101 0.99 MCAODC_04880 rarD EamA family transporter RarD 0.98 MCAODC_02960 dsbD protein-disulfide reductase DsbD low > 87
Escherichia fergusonii Becca 0.99 EFB2_04818 Protein RarD 0.99 EFB2_04399 Thiol:disulfide interchange protein DsbD low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS21920 EamA family transporter RarD 0.99 ECOLIN_RS24030 protein-disulfide reductase DsbD low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF245 Protein rarD 0.87 GFF2016 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) low > 78
Enterobacter asburiae PDN3 0.91 EX28DRAFT_4484 rarD protein 0.84 EX28DRAFT_3333 Thiol:disulfide interchange protein low > 76
Enterobacter sp. TBS_079 0.91 MPMX20_04461 Protein RarD 0.83 MPMX20_00416 Thiol:disulfide interchange protein DsbD low > 85
Klebsiella michiganensis M5al 0.87 BWI76_RS01230 chloramphenicol resistance permease RarD 0.80 BWI76_RS02315 protein-disulfide reductase DsbD low > 92
Serratia liquefaciens MT49 0.80 IAI46_00755 EamA family transporter RarD 0.67 IAI46_01465 protein-disulfide reductase DsbD low > 86
Pectobacterium carotovorum WPP14 0.76 HER17_RS01380 EamA family transporter RarD 0.65 HER17_RS18850 protein-disulfide reductase DsbD low > 75
Erwinia tracheiphila SCR3 0.74 LU632_RS24110 rarD EamA family transporter RarD 0.61 LU632_RS01840 protein-disulfide reductase DsbD low > 74
Pantoea sp. MT58 0.73 IAI47_18375 EamA family transporter RarD 0.63 IAI47_17335 protein-disulfide reductase DsbD low > 76
Rahnella sp. WP5 0.71 EX31_RS15195 EamA family transporter RarD 0.63 EX31_RS08975 protein-disulfide reductase DsbD low > 89
Dickeya dadantii 3937 0.67 DDA3937_RS19865 EamA family transporter RarD 0.61 DDA3937_RS02705 protein-disulfide reductase DsbD low > 74
Dickeya dianthicola ME23 0.65 DZA65_RS21060 EamA family transporter RarD 0.60 DZA65_RS02835 protein-disulfide reductase DsbD low > 75
Dickeya dianthicola 67-19 0.65 HGI48_RS20020 EamA family transporter RarD 0.60 HGI48_RS02680 protein-disulfide reductase DsbD low > 71
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_01040 protein RarD 0.49 CSW01_13635 thiol:disulfide interchange protein DsbD low > 62
Shewanella oneidensis MR-1 0.59 SO4243 rarD rarD protein (NCBI ptt file) 0.43 SO0696 dsbD thiol:disulfide interchange protein DsbD (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.58 Shewana3_3765 transporter DMT superfamily protein (RefSeq) 0.44 Shewana3_3576 dipZ thiol:disulfide interchange protein precursor (RefSeq) low > 73
Shewanella loihica PV-4 0.57 Shew_3476 transporter DMT superfamily protein (RefSeq) 0.44 Shew_3266 dipZ thiol:disulfide interchange protein precursor (RefSeq) low > 60
Shewanella amazonensis SB2B 0.55 Sama_0332 rarD protein (RefSeq) 0.42 Sama_0538 dipZ thiol:disulfide interchange protein precursor (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.49 MIT1002_00151 putative chloramphenical resistance permease RarD 0.42 MIT1002_03939 Thiol:disulfide interchange protein DsbD precursor — —
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_4754 Protein rarD 0.29 Pf6N2E2_2398 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) — —
Pseudomonas sp. RS175 0.48 PFR28_04108 Protein RarD 0.29 PFR28_01029 Thiol:disulfide interchange protein DsbD — —
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_2480 Protein rarD 0.30 Pf1N1B4_210 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) low > 87
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_1142 Protein rarD 0.30 PfGW456L13_2298 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) low > 87
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_14110 Putative D-serine transporter (from data) 0.29 AO356_02870 thiol:disulfide interchange protein — —
Pseudomonas fluorescens FW300-N2E3 0.46 AO353_07550 chloramphenical resistance permease RarD 0.27 AO353_19365 thiol:disulfide interchange protein low > 101
Pseudomonas putida KT2440 0.46 PP_0358 conserved membrane protein of unknown function 0.27 PP_4235 thiol/disulfide interchange protein 2 low > 96
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS27675 EamA family transporter RarD 0.28 PFLU_RS21490 protein-disulfide reductase DsbD — —
Pseudomonas fluorescens SBW25 0.46 PFLU_RS27675 EamA family transporter RarD 0.28 PFLU_RS21490 protein-disulfide reductase DsbD — —
Pseudomonas simiae WCS417 0.46 PS417_26030 chloramphenical resistance permease RarD 0.28 PS417_19525 thiol:disulfide interchange protein — —
Paraburkholderia sabiae LMG 24235 0.41 QEN71_RS26035 EamA family transporter RarD 0.28 QEN71_RS28120 protein-disulfide reductase DsbD — —
Pseudomonas stutzeri RCH2 0.41 Psest_0356 rarD protein 0.28 Psest_1603 Thiol:disulfide interchange protein low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.40 Psyr_4698 RarD protein 0.26 Psyr_4398 Protein-disulfide reductase — —
Pseudomonas syringae pv. syringae B728a 0.40 Psyr_4698 RarD protein 0.26 Psyr_4398 Protein-disulfide reductase — —
Marinobacter adhaerens HP15 0.39 HP15_2670 RarD protein, DMT superfamily transporter 0.30 HP15_2101 membrane protein containing cytochrome c assembly protein, transmembrane region domain low > 73
Pseudomonas sp. S08-1 0.38 OH686_10385 Uncharacterized inner membrane protein RarD 0.23 OH686_07580 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase — —
Cupriavidus basilensis FW507-4G11 0.38 RR42_RS20410 transporter 0.29 RR42_RS19110 thiol:disulfide interchange protein — —
Kangiella aquimarina DSM 16071 0.38 B158DRAFT_0490 rarD protein 0.33 B158DRAFT_0153 Thiol:disulfide interchange protein low > 40
Ralstonia sp. UNC404CL21Col 0.37 ABZR87_RS08060 EamA family transporter RarD 0.30 ABZR87_RS02695 protein-disulfide reductase DsbD — —
Ralstonia solanacearum GMI1000 0.36 RS_RS02855 EamA family transporter RarD 0.30 RS_RS14985 thiol:disulfide interchange protein DsbD — —
Ralstonia solanacearum UW163 0.35 UW163_RS01440 EamA family transporter RarD 0.30 UW163_RS06570 protein-disulfide reductase DsbD — —
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS12170 EamA family transporter RarD 0.30 RALBFv3_RS07045 protein-disulfide reductase DsbD low > 76
Ralstonia solanacearum PSI07 0.33 RPSI07_RS21160 EamA family transporter RarD 0.31 RPSI07_RS10195 protein-disulfide reductase DsbD low > 81
Herbaspirillum seropedicae SmR1 0.33 HSERO_RS23555 membrane protein 0.31 HSERO_RS00715 thiol:disulfide interchange protein — —
Brevundimonas sp. GW460-12-10-14-LB2 0.30 A4249_RS12695 EamA family transporter RarD 0.22 A4249_RS11500 protein-disulfide reductase DsbD low > 48
Burkholderia phytofirmans PsJN 0.20 BPHYT_RS34860 chemotaxis protein 0.28 BPHYT_RS17970 thiol:disulfide interchange protein — —
Castellaniella sp019104865 MT123 0.17 ABCV34_RS08310 EamA family transporter RarD 0.29 ABCV34_RS03205 protein-disulfide reductase DsbD low > 48
Paraburkholderia graminis OAS925 0.16 ABIE53_004634 chloramphenicol-sensitive protein RarD 0.28 ABIE53_003757 thiol:disulfide interchange protein DsbD low > 113
Paraburkholderia bryophila 376MFSha3.1 0.16 H281DRAFT_03622 chloramphenicol-sensitive protein RarD 0.28 H281DRAFT_05598 thiol:disulfide interchange protein DsbD — —

Not shown: 20 genomes with orthologs for NOLOHH_06505 only; 1 genomes with orthologs for NOLOHH_04715 only