Conservation of cofitness between MIT1002_03473 and MIT1002_02405 in Alteromonas macleodii MIT1002

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Alteromonas macleodii MIT1002 1.0 MIT1002_03473 5-keto-D-gluconate transporter 1.0 MIT1002_02405 Phosphogluconate dehydratase 0.49 19
Pseudomonas putida KT2440 0.36 PP_3417 D-gluconate transporter 0.63 PP_1010 phosphogluconate dehydratase — —
Pseudomonas sp. SVBP6 0.36 COO64_RS25580 GntP family permease 0.63 COO64_RS04535 edd phosphogluconate dehydratase — —
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS28835 gluconate:H+ symporter (gntT) (from data) 0.60 RR42_RS37440 phosphogluconate dehydratase low > 128
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF953 L-idonate, D-gluconate, 5-keto-D-gluconate transporter 0.66 GFF1630 Phosphogluconate dehydratase (EC 4.2.1.12) low > 78
Pseudomonas sp. BP01 0.36 JOY50_RS23615 GntP family permease 0.63 JOY50_RS11390 edd phosphogluconate dehydratase — —
Enterobacter sp. TBS_079 0.36 MPMX20_04302 High-affinity gluconate transporter 0.66 MPMX20_02756 Phosphogluconate dehydratase low > 85
Klebsiella michiganensis M5al 0.35 BWI76_RS26235 gluconate transporter 0.65 BWI76_RS18100 phosphogluconate dehydratase low > 92
Enterobacter asburiae PDN3 0.35 EX28DRAFT_4127 gluconate transporter 0.67 EX28DRAFT_0705 6-phosphogluconate dehydratase (EC 4.2.1.12) low > 76
Herbaspirillum seropedicae SmR1 0.35 HSERO_RS08740 permease 0.60 HSERO_RS05520 phosphogluconate dehydratase — —
Escherichia coli BL21 0.35 ECD_04131 L-idonate and D-gluconate transporter 0.66 ECD_01822 6-phosphogluconate dehydratase low > 61
Escherichia coli ECOR38 0.35 HEPCGN_09955 idnT gnt-II system L-idonate transporter 0.66 HEPCGN_04745 edd phosphogluconate dehydratase low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_0417 gluconate permease GntT 0.63 Psyr_1109 6-phosphogluconate dehydratase low > 86
Escherichia fergusonii Becca 0.35 EFB2_04270 Gnt-II system L-idonate transporter 0.66 EFB2_02092 Phosphogluconate dehydratase low > 86
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_0417 gluconate permease GntT 0.63 Psyr_1109 6-phosphogluconate dehydratase low > 86
Escherichia coli BW25113 0.35 b4265 idnT L-idonate and D-gluconate transporter (NCBI) 0.66 b1851 edd phosphogluconate dehydratase (NCBI) low > 76
Ralstonia solanacearum GMI1000 0.35 RS_RS22870 permease 0.62 RS_RS24620 phosphogluconate dehydratase low > 80
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS18165 permease 0.62 RALBFv3_RS16385 phosphogluconate dehydratase low > 76
Escherichia coli ECOR27 0.35 NOLOHH_04030 idnT gnt-II system L-idonate transporter 0.66 NOLOHH_16850 edd phosphogluconate dehydratase low > 76
Ralstonia solanacearum UW163 0.35 UW163_RS20965 permease 0.62 UW163_RS17125 phosphogluconate dehydratase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_03771 Gnt-II system L-idonate transporter 0.66 OHPLBJKB_01878 Phosphogluconate dehydratase low > 74
Ralstonia solanacearum PSI07 0.35 RPSI07_RS05470 permease 0.62 RPSI07_RS07320 phosphogluconate dehydratase low > 81
Pseudomonas aeruginosa PUPa3 0.35 DQ20_RS59240 GntP family permease 0.65 DQ20_RS40090 edd;go_function=phosphogluconate phosphogluconate dehydratase low > 101
Ralstonia sp. UNC404CL21Col 0.35 ABZR87_RS19095 gluconate:H+ symporter 0.61 ABZR87_RS22920 phosphogluconate dehydratase 0.65 7
Pseudomonas aeruginosa PA14 0.35 IKLFDK_11385 Gluconate permease 0.65 IKLFDK_16230 phosphogluconate dehydratase — —
Pseudomonas aeruginosa MRSN321 0.35 DY961_RS18000 GntP family permease 0.65 DY961_RS00950 edd;go_function=phosphogluconate phosphogluconate dehydratase low > 100
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_25205 permease DsdX 0.64 AO353_03420 phosphogluconate dehydratase low > 101
Escherichia coli ECRC62 0.34 BNILDI_02860 gntU gluconate transporter 0.66 BNILDI_15645 edd phosphogluconate dehydratase low > 75
Escherichia coli ECRC99 0.34 KEDOAH_11295 gntU gluconate transporter 0.66 KEDOAH_01765 edd phosphogluconate dehydratase — —
Rahnella sp. WP5 0.34 EX31_RS16635 gluconate transporter 0.66 EX31_RS16630 phosphogluconate dehydratase low > 89
Escherichia coli ECRC102 0.34 NIAGMN_14615 gntU gluconate transporter 0.66 NIAGMN_01720 edd phosphogluconate dehydratase low > 80
Escherichia coli ECRC101 0.34 MCAODC_07375 gntU gluconate transporter 0.66 MCAODC_19065 edd phosphogluconate dehydratase low > 87
Escherichia coli ECRC100 0.34 OKFHMN_16845 gntU gluconate transporter 0.66 OKFHMN_26340 edd phosphogluconate dehydratase low > 79
Escherichia coli ECRC98 0.34 JDDGAC_20475 gntU gluconate transporter 0.66 JDDGAC_00915 edd phosphogluconate dehydratase low > 87
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_1927 Gluconate permease 0.63 PfGW456L13_1889 Phosphogluconate dehydratase (EC 4.2.1.12) 0.38 43
Escherichia coli Nissle 1917 0.34 ECOLIN_RS19665 gluconate transporter 0.66 ECOLIN_RS10310 phosphogluconate dehydratase — —
Pseudomonas fluorescens SBW25-INTG 0.34 PFLU_RS23585 GntP family permease 0.65 PFLU_RS24330 phosphogluconate dehydratase 0.68 3
Pseudomonas fluorescens SBW25 0.34 PFLU_RS23585 GntP family permease 0.65 PFLU_RS24330 phosphogluconate dehydratase 0.65 10
Pseudomonas simiae WCS417 0.34 PS417_21980 permease DsdX 0.65 PS417_22690 phosphogluconate dehydratase 0.31 2
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_556 Gluconate permease 0.63 Pf1N1B4_601 Phosphogluconate dehydratase (EC 4.2.1.12) — —
Paraburkholderia sabiae LMG 24235 0.34 QEN71_RS26910 GntP family permease 0.58 QEN71_RS26920 phosphogluconate dehydratase low > 153
Pseudomonas lactucae CFBP13502 0.34 GEMAOFIL_04534 High-affinity gluconate transporter 0.65 GEMAOFIL_04692 Phosphogluconate dehydratase 0.66 19
Serratia liquefaciens MT49 0.34 IAI46_23170 gluconate transporter 0.67 IAI46_23175 phosphogluconate dehydratase low > 87
Klebsiella pneumoniae MKP103 0.34 KDGMDA_07030 gluconate transporter 0.65 KDGMDA_25365 phosphogluconate dehydratase low > 95
Pseudomonas orientalis W4I3 0.34 QF045_RS24085 GntP family permease 0.65 QF045_RS24860 phosphogluconate dehydratase 0.95 48
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_05055 permease DsdX 0.64 AO356_05220 phosphogluconate dehydratase — —
Sphingomonas koreensis DSMZ 15582 0.34 Ga0059261_1667 gluconate permease GntT (TC 2.A.8.1.4) 0.53 Ga0059261_0354 6-phosphogluconate dehydratase (EC 4.2.1.12) low > 68
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_2863 Gluconate permease 0.64 Pf6N2E2_2898 Phosphogluconate dehydratase (EC 4.2.1.12) — —
Pseudomonas sp. DMC3 0.34 GFF4936 High-affinity gluconate transporter 0.64 GFF5152 Phosphogluconate dehydratase low > 89
Pseudomonas sp. RS175 0.34 PFR28_00595 High-affinity gluconate transporter 0.65 PFR28_00561 Phosphogluconate dehydratase 0.20 16
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_04276 gluconate permease GntT 0.59 H281DRAFT_04278 6-phosphogluconate dehydratase 0.52 5
Burkholderia phytofirmans PsJN 0.33 BPHYT_RS16725 gluconate:H+ symporter (gntT) (from data) 0.59 BPHYT_RS16735 phosphogluconate dehydratase low > 109
Paraburkholderia graminis OAS925 0.33 ABIE53_003515 GntP family gluconate:H+ symporter 0.60 ABIE53_003517 phosphogluconate dehydratase low > 113
Acinetobacter baumannii LAC-4 0.31 RR41_RS16520 gluconate:H+ symporter 0.62 RR41_RS16530 phosphogluconate dehydratase low > 55
Dyella japonica UNC79MFTsu3.2 0.31 ABZR86_RS12640 gluconate:H+ symporter 0.57 ABZR86_RS14690 phosphogluconate dehydratase low > 74
Acidovorax sp. GW101-3H11 0.31 Ac3H11_3740 Gluconate permease 0.53 Ac3H11_2082 Phosphogluconate dehydratase (EC 4.2.1.12) — —
Variovorax sp. SCN45 0.28 GFF1885 Gluconate transporter family protein 0.52 GFF6513 Phosphogluconate dehydratase (EC 4.2.1.12) low > 127
Vibrio cholerae E7946 ATCC 55056 0.28 CSW01_01470 permease 0.51 CSW01_01480 phosphogluconate dehydratase low > 62
Sphingobium sp. HT1-2 0.24 GFF1926 Gluconate transporter family protein 0.58 GFF1593 Phosphogluconate dehydratase (EC 4.2.1.12) low > 95
Shewanella loihica PV-4 0.21 Shew_2533 gluconate transporter (RefSeq) 0.66 Shew_2046 phosphogluconate dehydratase (RefSeq) — —
Pseudomonas segetis P6 0.20 MPMX49_03493 D-serine transporter DsdX 0.64 MPMX49_02841 Phosphogluconate dehydratase — —
Shewanella oneidensis MR-1 0.18 SO1771 permease, GntP family (NCBI ptt file) 0.67 SO2487 edd 6-phosphogluconate dehydratase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.17 Shewana3_2684 gluconate transporter (RefSeq) 0.67 Shewana3_2149 phosphogluconate dehydratase (RefSeq) low > 73

Not shown: 14 genomes with orthologs for MIT1002_03473 only; 23 genomes with orthologs for MIT1002_02405 only