Conservation of cofitness between MCAODC_03455 and MCAODC_13575 in Escherichia coli ECRC101

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC101 1.0 MCAODC_03455 dusA tRNA dihydrouridine(20/20a) synthase DusA 1.0 MCAODC_13575 fadL long-chain fatty acid transporter FadL 0.63 11
Escherichia coli ECRC98 1.00 JDDGAC_16580 dusA tRNA dihydrouridine(20/20a) synthase DusA 1.00 JDDGAC_26505 fadL long-chain fatty acid transporter FadL low > 86
Escherichia coli ECRC99 1.00 KEDOAH_15205 dusA tRNA dihydrouridine(20/20a) synthase DusA 1.00 KEDOAH_05650 fadL long-chain fatty acid transporter FadL — —
Escherichia coli ECRC100 1.00 OKFHMN_12945 dusA tRNA dihydrouridine(20/20a) synthase DusA 1.00 OKFHMN_22545 fadL long-chain fatty acid transporter FadL low > 80
Escherichia coli ECRC62 0.97 BNILDI_06330 dusA tRNA dihydrouridine(20/20a) synthase DusA 0.99 BNILDI_13095 fadL long-chain fatty acid transporter FadL low > 75
Escherichia coli ECRC102 0.97 NIAGMN_10790 dusA tRNA dihydrouridine(20/20a) synthase DusA 1.00 NIAGMN_20320 fadL long-chain fatty acid transporter FadL — —
Escherichia coli ECOR27 0.97 NOLOHH_05195 dusA tRNA dihydrouridine(20/20a) synthase DusA 1.00 NOLOHH_14180 fadL long-chain fatty acid transporter FadL low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.97 OHPLBJKB_03994 tRNA-dihydrouridine(20/20a) synthase 0.99 OHPLBJKB_01362 Long-chain fatty acid transport protein low > 73
Escherichia coli ECOR38 0.97 HEPCGN_11560 dusA tRNA dihydrouridine(20/20a) synthase DusA 0.99 HEPCGN_21740 fadL long-chain fatty acid transporter FadL low > 87
Escherichia coli BL21 0.97 ECD_03921 tRNA-dihydrouridine synthase A 0.99 ECD_02268 long-chain fatty acid outer membrane transporter low > 61
Escherichia coli BW25113 0.94 b4049 dusA tRNA-dihydrouridine synthase A (RefSeq) 0.99 b2344 fadL long-chain fatty acid outer membrane transporter (RefSeq) low > 76
Escherichia coli Nissle 1917 0.92 ECOLIN_RS23355 tRNA dihydrouridine(20/20a) synthase DusA 0.76 ECOLIN_RS13565 long-chain fatty acid transporter FadL low > 55
Escherichia fergusonii Becca 0.92 EFB2_04556 tRNA-dihydrouridine(20/20a) synthase 0.76 EFB2_01515 Long-chain fatty acid transport protein low > 86
Enterobacter asburiae PDN3 0.88 EX28DRAFT_4263 tRNA dihydrouridine synthase A 0.77 EX28DRAFT_0268 Long-chain fatty acid transport protein low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.88 GFF1418 tRNA dihydrouridine synthase A (EC 1.-.-.-) 0.90 GFF1957 Long-chain fatty acid transport protein low > 78
Enterobacter sp. TBS_079 0.88 MPMX20_00265 tRNA-dihydrouridine(20/20a) synthase 0.77 MPMX20_03271 Long-chain fatty acid transport protein low > 85
Klebsiella michiganensis M5al 0.87 BWI76_RS01900 tRNA-dihydrouridine synthase A 0.74 BWI76_RS20470 long-chain fatty acid transporter low > 92
Serratia liquefaciens MT49 0.79 IAI46_22970 tRNA dihydrouridine(20/20a) synthase DusA 0.72 IAI46_18060 long-chain fatty acid transporter FadL low > 86
Pantoea sp. MT58 0.78 IAI47_17865 tRNA dihydrouridine(20/20a) synthase DusA 0.62 IAI47_06115 long-chain fatty acid transporter FadL low > 76
Pectobacterium carotovorum WPP14 0.78 HER17_RS03680 tRNA dihydrouridine(20/20a) synthase DusA 0.62 HER17_RS06875 long-chain fatty acid transporter FadL low > 75
Dickeya dadantii 3937 0.77 DDA3937_RS17480 tRNA dihydrouridine(20/20a) synthase DusA 0.62 DDA3937_RS14615 long-chain fatty acid transporter FadL low > 74
Rahnella sp. WP5 0.76 EX31_RS11865 tRNA dihydrouridine(20/20a) synthase DusA 0.65 EX31_RS19720 long-chain fatty acid transporter FadL low > 89
Dickeya dianthicola 67-19 0.75 HGI48_RS17540 tRNA dihydrouridine(20/20a) synthase DusA 0.60 HGI48_RS14565 long-chain fatty acid transporter FadL low > 71
Dickeya dianthicola ME23 0.75 DZA65_RS18620 tRNA dihydrouridine(20/20a) synthase DusA 0.60 DZA65_RS15505 long-chain fatty acid transporter FadL low > 75
Erwinia tracheiphila SCR3 0.73 LU632_RS23765 dusA tRNA dihydrouridine(20/20a) synthase DusA 0.65 LU632_RS07305 fadL long-chain fatty acid transporter FadL low > 74
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_01985 tRNA dihydrouridine(20/20a) synthase DusA 0.32 CSW01_18440 long-chain fatty acid transporter low > 62
Shewanella sp. ANA-3 0.66 Shewana3_0718 tRNA-dihydrouridine synthase A (RefSeq) 0.27 Shewana3_3757 membrane protein involved in aromatic hydrocarbon degradation (RefSeq) 0.46 64
Shewanella oneidensis MR-1 0.65 SO3912 TIM-barrel protein, yjbN family (NCBI ptt file) 0.26 SO4232 long-chain fatty acid transport protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.65 Sama_3055 tRNA-dihydrouridine synthase A (RefSeq) 0.24 Sama_0339 membrane protein involved in aromatic hydrocarbon degradation (RefSeq) low > 62
Shewanella loihica PV-4 0.62 Shew_0536 tRNA-dihydrouridine synthase A (RefSeq) 0.24 Shew_2436 membrane protein involved in aromatic hydrocarbon degradation (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.56 MIT1002_03387 putative tRNA-dihydrouridine synthase 0.30 MIT1002_03890 Outer membrane flp protein low > 70
Azospirillum sp. SherDot2 0.55 MPMX19_00670 tRNA-dihydrouridine(20/20a) synthase 0.18 MPMX19_00681 47 kDa outer membrane protein low > 112
Azospirillum brasilense Sp245 0.54 AZOBR_RS15935 tRNA-dihydrouridine synthase A 0.14 AZOBR_RS10410 long-chain fatty acid transporter low > 97
Dyella japonica UNC79MFTsu3.2 0.54 ABZR86_RS18350 tRNA dihydrouridine(20/20a) synthase DusA 0.15 ABZR86_RS12985 outer membrane protein transport protein low > 74
Pseudomonas putida KT2440 0.53 PP_2169 tRNA-dihydrouridine synthase A 0.18 PP_1689 putative Long-chain fatty acid transporter low > 96
Pseudomonas stutzeri RCH2 0.53 Psest_2706 tRNA dihydrouridine synthase A 0.19 Psest_2997 Long-chain fatty acid transport protein low > 67
Marinobacter adhaerens HP15 0.52 HP15_2240 tRNA-dihydrouridine synthase, TIM-barrel, YjbN 0.11 HP15_291 membrane protein involved in aromatic hydrocarbon degradation low > 73
Pseudomonas syringae pv. syringae B728a 0.52 Psyr_1936 tRNA-U16,U17-dihydrouridine synthase 0.17 Psyr_3669 Membrane protein involved in aromatic hydrocarbon degradation low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.52 Psyr_1936 tRNA-U16,U17-dihydrouridine synthase 0.17 Psyr_3669 Membrane protein involved in aromatic hydrocarbon degradation low > 86
Pseudomonas sp. S08-1 0.52 OH686_22745 tRNA-dihydrouridine(20/20a) synthase 0.17 OH686_04915 Long-chain fatty acid transport protein low > 80
Pseudomonas fluorescens SBW25 0.52 PFLU_RS07810 tRNA dihydrouridine(20/20a) synthase DusA 0.17 PFLU_RS21965 transporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.52 PFLU_RS07810 tRNA dihydrouridine(20/20a) synthase DusA 0.17 PFLU_RS21965 transporter low > 109
Pseudomonas fluorescens FW300-N1B4 0.52 Pf1N1B4_57 tRNA dihydrouridine synthase A 0.20 Pf1N1B4_3720 Long-chain fatty acid transport protein low > 87
Pseudomonas simiae WCS417 0.51 PS417_07740 tRNA-dihydrouridine synthase A 0.16 PS417_19995 Long-chain fatty acid transport protein low > 88
Caulobacter crescentus NA1000 0.51 CCNA_01364 NIFR3-like protein 0.13 CCNA_02179 long-chain fatty acid transport protein precursor low > 66
Caulobacter crescentus NA1000 Δfur 0.51 CCNA_01364 NIFR3-like protein 0.13 CCNA_02179 long-chain fatty acid transport protein precursor low > 67
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_00295 tRNA-dihydrouridine synthase A 0.17 AO353_24065 Long-chain fatty acid transport protein low > 101
Rhodanobacter denitrificans FW104-10B01 0.51 LRK54_RS05995 tRNA dihydrouridine(20/20a) synthase DusA 0.11 LRK54_RS07145 OmpP1/FadL family transporter low > 59
Rhodanobacter denitrificans MT42 0.51 LRK55_RS05750 tRNA dihydrouridine(20/20a) synthase DusA 0.11 LRK55_RS06885 outer membrane protein transport protein low > 63
Pseudomonas sp. RS175 0.50 PFR28_01143 tRNA-dihydrouridine(20/20a) synthase 0.20 PFR28_03194 Long-chain fatty acid transport protein low > 88
Rhodanobacter sp. FW510-T8 0.50 OKGIIK_00625 dusA tRNA dihydrouridine(20/20a) synthase DusA 0.13 OKGIIK_16490 Outer membrane protein transport protein (OMPP1/FadL/TodX) low > 52
Pseudomonas fluorescens FW300-N2E2 0.50 Pf6N2E2_2257 tRNA dihydrouridine synthase A 0.20 Pf6N2E2_5754 Long-chain fatty acid transport protein low > 103
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_02170 tRNA-dihydrouridine synthase A 0.19 AO356_27575 Long-chain fatty acid transport protein low > 104
Brevundimonas sp. GW460-12-10-14-LB2 0.48 A4249_RS10515 tRNA dihydrouridine(20/20a) synthase DusA 0.12 A4249_RS00530 outer membrane protein transport protein low > 48
Bosea sp. OAE506 0.48 ABIE41_RS21285 tRNA dihydrouridine(20/20a) synthase DusA 0.07 ABIE41_RS19190 outer membrane protein transport protein low > 77
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_3987 tRNA dihydrouridine synthase A 0.19 PfGW456L13_4229 Long-chain fatty acid transport protein low > 87
Lysobacter sp. OAE881 0.46 ABIE51_RS03925 tRNA dihydrouridine(20/20a) synthase DusA 0.15 ABIE51_RS19235 outer membrane protein transport protein 0.69 14
Xanthomonas campestris pv. campestris strain 8004 0.45 Xcc-8004.5010.1 tRNA dihydrouridine synthase A 0.15 Xcc-8004.22.1 Long-chain fatty acid transport protein low > 74
Rhodospirillum rubrum S1H 0.44 Rru_A1621 Dihydrouridine synthase TIM-barrel protein yjbN (NCBI) 0.20 Rru_A1313 Membrane protein involved in aromatic hydrocarbon degradation (NCBI) low > 58
Castellaniella sp019104865 MT123 0.42 ABCV34_RS04335 tRNA dihydrouridine(20/20a) synthase DusA 0.20 ABCV34_RS11395 porin low > 48

Not shown: 24 genomes with orthologs for MCAODC_03455 only; 5 genomes with orthologs for MCAODC_13575 only