Conservation of cofitness between LRK55_RS03905 and LRK55_RS11485 in Rhodanobacter denitrificans MT42

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodanobacter denitrificans MT42 1.0 LRK55_RS03905 ADP compounds hydrolase NudE 1.0 LRK55_RS11485 ATP-binding cassette domain-containing protein 0.75 1
Rhodanobacter denitrificans FW104-10B01 1.00 LRK54_RS04135 ADP compounds hydrolase NudE 1.00 LRK54_RS11760 ATP-binding cassette domain-containing protein low > 59
Rhodanobacter sp. FW510-T8 0.95 OKGIIK_11000 nudE ADP compounds hydrolase NudE 0.92 OKGIIK_12135 mlaF ABC transporter ATP-binding protein low > 52
Dyella japonica UNC79MFTsu3.2 0.87 ABZR86_RS10210 ADP compounds hydrolase NudE 0.83 ABZR86_RS11885 ATP-binding cassette domain-containing protein low > 74
Lysobacter sp. OAE881 0.61 ABIE51_RS05270 ADP compounds hydrolase NudE 0.43 ABIE51_RS01015 ABC transporter ATP-binding protein low > 62
Xanthomonas campestris pv. campestris strain 8004 0.58 Xcc-8004.1561.1 ADP compounds hydrolase NudE (EC 3.6.1.-) 0.41 Xcc-8004.5363.1 Uncharacterized ABC transporter, ATP-binding protein YrbF low > 74
Alteromonas macleodii MIT1002 0.51 MIT1002_03992 ADP compounds hydrolase NudE 0.45 MIT1002_00834 putative ABC transporter ATP-binding protein low > 70
Klebsiella michiganensis M5al 0.48 BWI76_RS26130 ADP compounds hydrolase NudE 0.49 BWI76_RS25230 phospholipid ABC transporter ATP-binding protein MlaF low > 92
Enterobacter asburiae PDN3 0.47 EX28DRAFT_4145 NTP pyrophosphohydrolases including oxidative damage repair enzymes 0.48 EX28DRAFT_3249 ABC-type transport system involved in resistance to organic solvents, ATPase component low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF622 ADP compounds hydrolase NudE (EC 3.6.1.-) 0.49 GFF2939 Uncharacterized ABC transporter, ATP-binding protein YrbF low > 78
Enterobacter sp. TBS_079 0.46 MPMX20_04285 ADP compounds hydrolase NudE 0.48 MPMX20_04101 Intermembrane phospholipid transport system ATP-binding protein MlaF low > 85
Shewanella amazonensis SB2B 0.46 Sama_0183 nudE ADP-ribose diphosphatase NudE (RefSeq) 0.51 Sama_3081 ABC transporter, ATP-binding protein, putative (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.46 CSW01_13730 ADP compounds hydrolase NudE 0.50 CSW01_12775 phospholipid ABC transporter ATP-binding protein MlaF low > 62
Pectobacterium carotovorum WPP14 0.46 HER17_RS01735 ADP compounds hydrolase NudE 0.50 HER17_RS20025 phospholipid ABC transporter ATP-binding protein MlaF low > 75
Escherichia coli ECRC62 0.46 BNILDI_02655 nudE ADP compounds hydrolase NudE 0.48 BNILDI_01760 mlaF phospholipid ABC transporter ATP-binding protein MlaF low > 75
Escherichia coli Nissle 1917 0.46 ECOLIN_RS19400 ADP compounds hydrolase NudE 0.48 ECOLIN_RS18390 phospholipid ABC transporter ATP-binding protein MlaF low > 55
Escherichia coli BW25113 0.46 b3397 nudE ADP-ribose diphosphatase (NCBI) 0.48 b3195 yrbF predicted toluene transporter subunit: ATP-binding component of ABC superfamily (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_00306 ADP compounds hydrolase NudE 0.48 OHPLBJKB_00505 putative phospholipid import ATP-binding protein MlaF low > 73
Escherichia fergusonii Becca 0.46 EFB2_00431 ADP compounds hydrolase NudE 0.48 EFB2_00628 Intermembrane phospholipid transport system ATP-binding protein MlaF 0.48 38
Escherichia coli ECOR27 0.46 NOLOHH_08865 nudE ADP compounds hydrolase NudE 0.48 NOLOHH_09775 mlaF phospholipid ABC transporter ATP-binding protein MlaF low > 75
Escherichia coli BL21 0.46 ECD_03249 adenosine nucleotide hydrolase; Ap3A/Ap2A/ADP-ribose/NADH hydrolase 0.48 ECD_03060 ABC transporter maintaining OM lipid asymmetry, ATP-binding protein low > 61
Escherichia coli ECRC100 0.46 OKFHMN_17075 nudE ADP compounds hydrolase NudE 0.48 OKFHMN_17975 mlaF phospholipid ABC transporter ATP-binding protein MlaF low > 80
Escherichia coli ECRC102 0.46 NIAGMN_14845 nudE ADP compounds hydrolase NudE 0.48 NIAGMN_15735 mlaF phospholipid ABC transporter ATP-binding protein MlaF
Escherichia coli ECRC99 0.46 KEDOAH_11065 nudE ADP compounds hydrolase NudE 0.48 KEDOAH_10175 mlaF phospholipid ABC transporter ATP-binding protein MlaF
Escherichia coli ECRC101 0.46 MCAODC_07605 nudE ADP compounds hydrolase NudE 0.48 MCAODC_08495 mlaF phospholipid ABC transporter ATP-binding protein MlaF low > 87
Escherichia coli ECRC98 0.46 JDDGAC_20705 nudE ADP compounds hydrolase NudE 0.48 JDDGAC_21600 mlaF phospholipid ABC transporter ATP-binding protein MlaF low > 86
Dickeya dianthicola ME23 0.45 DZA65_RS20800 ADP compounds hydrolase NudE 0.49 DZA65_RS01545 phospholipid ABC transporter ATP-binding protein MlaF low > 75
Shewanella sp. ANA-3 0.45 Shewana3_0169 nudE ADP-ribose diphosphatase NudE (RefSeq) 0.48 Shewana3_0678 ABC transporter related (RefSeq) low > 73
Dickeya dadantii 3937 0.45 DDA3937_RS19585 ADP compounds hydrolase NudE 0.50 DDA3937_RS01565 phospholipid ABC transporter ATP-binding protein MlaF low > 74
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_10080 ADP-ribose diphosphatase 0.53 AO356_07005 ABC transporter ATP-binding protein low > 104
Pseudomonas sp. RS175 0.45 PFR28_04886 ADP compounds hydrolase NudE 0.52 PFR28_00179 Intermembrane phospholipid transport system ATP-binding protein MlaF low > 88
Escherichia coli ECOR38 0.45 HEPCGN_15895 nudE ADP compounds hydrolase NudE 0.48 HEPCGN_16850 mlaF phospholipid ABC transporter ATP-binding protein MlaF low > 87
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_404 ADP compounds hydrolase NudE (EC 3.6.1.-) 0.52 PfGW456L13_5008 Uncharacterized ABC transporter, ATP-binding protein YrbF low > 87
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS01385 ADP compounds hydrolase NudE 0.52 PFLU_RS04430 ATP-binding cassette domain-containing protein low > 109
Pseudomonas fluorescens SBW25 0.45 PFLU_RS01385 ADP compounds hydrolase NudE 0.52 PFLU_RS04430 ATP-binding cassette domain-containing protein low > 109
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_3886 ADP compounds hydrolase NudE (EC 3.6.1.-) 0.52 Pf6N2E2_3260 Uncharacterized ABC transporter, ATP-binding protein YrbF low > 103
Dickeya dianthicola 67-19 0.45 HGI48_RS19715 ADP compounds hydrolase NudE 0.49 HGI48_RS01480 phospholipid ABC transporter ATP-binding protein MlaF low > 71
Pseudomonas simiae WCS417 0.45 PS417_01290 ADP-ribose diphosphatase 0.52 PS417_04375 ABC transporter ATP-binding protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.45 AO353_11845 ADP-ribose diphosphatase 0.51 AO353_05150 ABC transporter ATP-binding protein low > 101
Pseudomonas putida KT2440 0.44 PP_0260 ADP-sugar pyrophosphorylase 0.51 PP_0958 phospholipid ABC transporter ATP-binding subunit low > 96
Serratia liquefaciens MT49 0.44 IAI46_23745 ADP compounds hydrolase NudE 0.49 IAI46_22430 phospholipid ABC transporter ATP-binding protein MlaF low > 86
Pantoea sp. MT58 0.44 IAI47_01855 ADP compounds hydrolase NudE 0.51 IAI47_17145 phospholipid ABC transporter ATP-binding protein MlaF low > 76
Erwinia amylovora T8 0.44 OLJFJH_04130 ADP compounds hydrolase NudE 0.51 OLJFJH_07105 phospholipid ABC transporter ATP-binding protein MlaF low > 58
Erwinia tracheiphila SCR3 0.43 LU632_RS22910 nudE ADP compounds hydrolase NudE 0.47 LU632_RS21245 mlaF phospholipid ABC transporter ATP-binding protein MlaF low > 74
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_1669 ADP compounds hydrolase NudE (EC 3.6.1.-) 0.51 Pf1N1B4_1074 Uncharacterized ABC transporter, ATP-binding protein YrbF
Shewanella loihica PV-4 0.43 Shew_0129 nudE ADP-ribose diphosphatase NudE (RefSeq) 0.47 Shew_3304 ABC transporter-related protein (RefSeq) low > 60
Pseudomonas stutzeri RCH2 0.42 Psest_3961 NTP pyrophosphohydrolases including oxidative damage repair enzymes 0.52 Psest_3307 ABC-type transport system involved in resistance to organic solvents, ATPase component low > 67
Rahnella sp. WP5 0.42 EX31_RS04755 ADP compounds hydrolase NudE 0.54 EX31_RS12435 phospholipid ABC transporter ATP-binding protein MlaF low > 89
Shewanella oneidensis MR-1 0.42 SO0190 MutT/nudix family protein (NCBI ptt file) 0.47 SO3954 ABC transporter, ATP-binding protein, putative (NCBI ptt file) low > 76
Pseudomonas sp. S08-1 0.42 OH686_14310 ADP compounds hydrolase NudE 0.52 OH686_08510 Phospholipid ABC transporter ATP-binding protein MlaF low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.41 Psyr_4941 NUDIX hydrolase 0.53 Psyr_4141 ABC transporter low > 86
Pseudomonas syringae pv. syringae B728a 0.41 Psyr_4941 NUDIX hydrolase 0.53 Psyr_4141 ABC transporter low > 86
Ralstonia solanacearum GMI1000 0.20 RS_RS10270 NUDIX hydrolase 0.48 RS_RS14845 ABC transporter ATP-binding protein low > 80
Ralstonia sp. UNC404CL21Col 0.19 ABZR87_RS14805 NUDIX hydrolase 0.49 ABZR87_RS02555 ABC transporter ATP-binding protein low > 80
Paraburkholderia sabiae LMG 24235 0.18 QEN71_RS24075 NUDIX hydrolase 0.45 QEN71_RS27920 ABC transporter ATP-binding protein low > 153
Paraburkholderia bryophila 376MFSha3.1 0.18 H281DRAFT_04582 ADP-ribose pyrophosphatase 0.47 H281DRAFT_05641 phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein low > 103
Burkholderia phytofirmans PsJN 0.18 BPHYT_RS06700 ADP-ribose pyrophosphatase 0.45 BPHYT_RS17765 toluene ABC transporter ATP-binding protein low > 109
Herbaspirillum seropedicae SmR1 0.18 HSERO_RS08895 NUDIX hydrolase 0.50 HSERO_RS20400 toluene ABC transporter ATP-binding protein
Variovorax sp. SCN45 0.17 GFF4765 ADP-ribose pyrophosphatase (EC 3.6.1.13) 0.46 GFF5334 Phospholipid ABC transporter ATP-binding protein MlaF low > 127
Variovorax sp. OAS795 0.17 ABID97_RS20420 NUDIX hydrolase 0.48 ABID97_RS23215 ABC transporter ATP-binding protein low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.16 GFF3696 ADP-ribose pyrophosphatase (EC 3.6.1.13) 0.48 GFF1325 Methionine ABC transporter ATP-binding protein low > 90

Not shown: 2 genomes with orthologs for LRK55_RS03905 only; 30 genomes with orthologs for LRK55_RS11485 only