Conservation of cofitness between JDDGAC_10395 and JDDGAC_05215 in Escherichia coli ECRC98

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_10395 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 1.0 JDDGAC_05215 trpB tryptophan synthase subunit beta 0.72 4
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02959 Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive 1.00 OHPLBJKB_02422 Tryptophan synthase beta chain low > 73
Escherichia coli ECRC99 1.00 KEDOAH_21225 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 1.00 KEDOAH_26080 trpB tryptophan synthase subunit beta
Escherichia coli ECRC101 1.00 MCAODC_25960 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 1.00 MCAODC_15595 trpB tryptophan synthase subunit beta low > 87
Escherichia coli ECRC100 1.00 OKFHMN_06740 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 1.00 OKFHMN_02670 trpB tryptophan synthase subunit beta low > 80
Escherichia coli ECRC102 1.00 NIAGMN_04790 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 1.00 NIAGMN_26840 trpB tryptophan synthase subunit beta
Escherichia coli ECOR27 1.00 NOLOHH_23170 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 1.00 NOLOHH_20330 trpB tryptophan synthase subunit beta low > 75
Escherichia coli BW25113 1.00 b0754 aroG 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible (NCBI) 1.00 b1261 trpB tryptophan synthase subunit beta (NCBI) 0.19 65
Escherichia coli BL21 1.00 ECD_00707 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible 0.99 ECD_01235 tryptophan synthase, beta subunit low > 61
Escherichia coli ECRC62 0.99 BNILDI_21165 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 1.00 BNILDI_18475 trpB tryptophan synthase subunit beta low > 75
Escherichia coli ECOR38 0.99 HEPCGN_01535 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 1.00 HEPCGN_25520 trpB tryptophan synthase subunit beta low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS04015 3-deoxy-7-phosphoheptulonate synthase AroG 1.00 ECOLIN_RS07600 tryptophan synthase subunit beta
Escherichia fergusonii Becca 0.99 EFB2_03352 Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive 1.00 EFB2_02665 Tryptophan synthase beta chain low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF8 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.97 GFF2725 Tryptophan synthase beta chain (EC 4.2.1.20)
Enterobacter asburiae PDN3 0.95 EX28DRAFT_2241 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54) 0.95 EX28DRAFT_0933 tryptophan synthase, beta subunit low > 76
Klebsiella michiganensis M5al 0.95 BWI76_RS08600 3-deoxy-7-phosphoheptulonate synthase 0.95 BWI76_RS11845 tryptophan synthase subunit beta low > 92
Enterobacter sp. TBS_079 0.94 MPMX20_01381 Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive 0.96 MPMX20_02513 Tryptophan synthase beta chain low > 85
Rahnella sp. WP5 0.91 EX31_RS23545 3-deoxy-7-phosphoheptulonate synthase AroG 0.89 EX31_RS09975 tryptophan synthase subunit beta low > 89
Serratia liquefaciens MT49 0.91 IAI46_06405 3-deoxy-7-phosphoheptulonate synthase AroG 0.91 IAI46_14040 tryptophan synthase subunit beta low > 86
Dickeya dadantii 3937 0.90 DDA3937_RS06560 3-deoxy-7-phosphoheptulonate synthase AroG 0.90 DDA3937_RS10465 tryptophan synthase subunit beta low > 74
Dickeya dianthicola ME23 0.89 DZA65_RS06960 3-deoxy-7-phosphoheptulonate synthase AroG 0.90 DZA65_RS10945 tryptophan synthase subunit beta low > 75
Pectobacterium carotovorum WPP14 0.89 HER17_RS14805 3-deoxy-7-phosphoheptulonate synthase AroG 0.91 HER17_RS10935 tryptophan synthase subunit beta low > 75
Dickeya dianthicola 67-19 0.89 HGI48_RS06605 3-deoxy-7-phosphoheptulonate synthase AroG 0.90 HGI48_RS10465 tryptophan synthase subunit beta low > 71
Pantoea sp. MT58 0.89 IAI47_13605 3-deoxy-7-phosphoheptulonate synthase AroG 0.89 IAI47_09170 tryptophan synthase subunit beta low > 76
Erwinia tracheiphila SCR3 0.87 LU632_RS15925 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.93 LU632_RS12770 trpB tryptophan synthase subunit beta low > 74
Shewanella sp. ANA-3 0.77 Shewana3_3528 phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) 0.79 Shewana3_1516 tryptophan synthase subunit beta (RefSeq) low > 73
Shewanella loihica PV-4 0.77 Shew_0851 phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) 0.79 Shew_2255 tryptophan synthase subunit beta (RefSeq) 0.53 59
Shewanella oneidensis MR-1 0.76 SO0756 aroG phospho-2-dehydro-3-deoxyheptonate aldolase, phe-sensitive (NCBI ptt file) 0.79 SO3023 trpB tryptophan synthase, beta subunit (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.75 CSW01_19270 3-deoxy-7-phosphoheptulonate synthase 0.81 CSW01_05930 tryptophan synthase subunit beta low > 62
Shewanella amazonensis SB2B 0.72 Sama_0657 phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) 0.79 Sama_2133 tryptophan synthase subunit beta (RefSeq) low > 62
Herbaspirillum seropedicae SmR1 0.68 HSERO_RS07160 phospho-2-dehydro-3-deoxyheptonate aldolase 0.49 HSERO_RS16475 tryptophan synthase subunit alpha 0.77 35
Dechlorosoma suillum PS 0.67 Dsui_3444 phospho-2-dehydro-3-deoxyheptonate aldolase 0.53 Dsui_3192 tryptophan synthase, beta subunit
Paraburkholderia sabiae LMG 24235 0.67 QEN71_RS26560 3-deoxy-7-phosphoheptulonate synthase AroG 0.53 QEN71_RS17645 tryptophan synthase subunit beta 0.68 11
Burkholderia phytofirmans PsJN 0.67 BPHYT_RS03535 phospho-2-dehydro-3-deoxyheptonate aldolase 0.53 BPHYT_RS33875 tryptophan synthase subunit alpha 0.83 7
Paraburkholderia graminis OAS925 0.67 ABIE53_000850 3-deoxy-7-phosphoheptulonate synthase 0.53 ABIE53_004809 tryptophan synthase beta chain
Cupriavidus basilensis FW507-4G11 0.67 RR42_RS05860 phospho-2-dehydro-3-deoxyheptonate aldolase 0.54 RR42_RS14360 tryptophan synthase subunit alpha 0.71 30
Ralstonia sp. UNC404CL21Col 0.67 ABZR87_RS01110 3-deoxy-7-phosphoheptulonate synthase AroG 0.53 ABZR87_RS14500 tryptophan synthase subunit beta 0.80 22
Paraburkholderia bryophila 376MFSha3.1 0.67 H281DRAFT_04687 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 0.53 H281DRAFT_06067 tryptophan synthase, beta chain 0.46 29
Ralstonia solanacearum PSI07 0.66 RPSI07_RS11845 3-deoxy-7-phosphoheptulonate synthase 0.53 RPSI07_RS14730 tryptophan synthase subunit beta
Ralstonia solanacearum UW163 0.66 UW163_RS08165 3-deoxy-7-phosphoheptulonate synthase 0.54 UW163_RS11140 tryptophan synthase subunit beta
Ralstonia solanacearum IBSBF1503 0.66 RALBFv3_RS05460 3-deoxy-7-phosphoheptulonate synthase 0.54 RALBFv3_RS02585 tryptophan synthase subunit beta
Ralstonia solanacearum GMI1000 0.65 RS_RS13320 3-deoxy-7-phosphoheptulonate synthase 0.53 RS_RS09965 tryptophan synthase subunit beta 0.49 51
Castellaniella sp019104865 MT123 0.65 ABCV34_RS06825 3-deoxy-7-phosphoheptulonate synthase AroG 0.50 ABCV34_RS08435 tryptophan synthase subunit beta
Rhodanobacter denitrificans FW104-10B01 0.64 LRK54_RS02730 3-deoxy-7-phosphoheptulonate synthase 0.53 LRK54_RS01685 tryptophan synthase subunit beta 0.24 31
Rhodanobacter denitrificans MT42 0.64 LRK55_RS02485 3-deoxy-7-phosphoheptulonate synthase 0.53 LRK55_RS01465 tryptophan synthase subunit beta low > 63
Caulobacter crescentus NA1000 0.63 CCNA_01463 3-deoxy-7-phosphoheptulonate synthase 0.52 CCNA_03658 tryptophan synthase beta chain low > 66
Rhodanobacter sp. FW510-T8 0.63 OKGIIK_09785 3-deoxy-7-phosphoheptulonate synthase 0.53 OKGIIK_04845 trpB tryptophan synthase subunit beta low > 52
Caulobacter crescentus NA1000 Δfur 0.63 CCNA_01463 3-deoxy-7-phosphoheptulonate synthase 0.52 CCNA_03658 tryptophan synthase beta chain low > 67
Xanthomonas campestris pv. campestris strain 8004 0.62 Xcc-8004.704.1 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) 0.52 Xcc-8004.1964.1 Tryptophan synthase beta chain (EC 4.2.1.20) low > 74
Rhodopseudomonas palustris CGA009 0.62 TX73_000140 3-deoxy-7-phosphoheptulonate synthase 0.51 TX73_000360 tryptophan synthase subunit beta
Acidovorax sp. GW101-3H11 0.61 Ac3H11_4034 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.51 Ac3H11_1534 Tryptophan synthase beta chain (EC 4.2.1.20) 0.93 14
Variovorax sp. OAS795 0.60 ABID97_RS06345 3-deoxy-7-phosphoheptulonate synthase 0.52 ABID97_RS08430 tryptophan synthase subunit beta 0.51 62
Variovorax sp. SCN45 0.60 GFF4447 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphat e synthase I alpha (EC 2.5.1.54) 0.52 GFF3883 Tryptophan synthase beta chain (EC 4.2.1.20)
Dyella japonica UNC79MFTsu3.2 0.60 ABZR86_RS00390 3-deoxy-7-phosphoheptulonate synthase 0.54 ABZR86_RS08000 tryptophan synthase subunit beta 0.62 15
Hydrogenophaga sp. GW460-11-11-14-LB1 0.60 GFF581 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.51 GFF3355 Tryptophan synthase beta chain (EC 4.2.1.20) 0.62 38

Not shown: 1 genomes with orthologs for JDDGAC_10395 only; 47 genomes with orthologs for JDDGAC_05215 only