Conservation of cofitness between IAI47_11310 and IAI47_10840 in Pantoea sp. MT58

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_11310 redox-regulated ATPase YchF 1.0 IAI47_10840 pyruvate kinase PykF 0.36 16
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF2784 GTP-binding and nucleic acid-binding protein YchF 0.88 GFF3567 Pyruvate kinase (EC 2.7.1.40) 0.67 62
Dickeya dianthicola 67-19 0.94 HGI48_RS10975 redox-regulated ATPase YchF 0.87 HGI48_RS12805 pyruvate kinase PykF low > 71
Dickeya dianthicola ME23 0.94 DZA65_RS11435 redox-regulated ATPase YchF 0.87 DZA65_RS13270 pyruvate kinase PykF low > 75
Dickeya dadantii 3937 0.94 DDA3937_RS11035 redox-regulated ATPase YchF 0.87 DDA3937_RS12740 pyruvate kinase PykF low > 74
Erwinia tracheiphila SCR3 0.94 LU632_RS13950 ychF redox-regulated ATPase YchF 0.92 LU632_RS11145 pykF pyruvate kinase PykF low > 74
Escherichia coli BW25113 0.93 b1203 ychF translation-associated GTPase (NCBI) 0.87 b1676 pykF pyruvate kinase (NCBI) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.93 OHPLBJKB_02484 Ribosome-binding ATPase YchF 0.87 OHPLBJKB_02048 Pyruvate kinase I low > 73
Escherichia coli ECRC99 0.93 KEDOAH_25405 ychF redox-regulated ATPase YchF 0.87 KEDOAH_00820 pykF pyruvate kinase PykF — —
Escherichia coli ECRC101 0.93 MCAODC_21850 ychF redox-regulated ATPase YchF 0.87 MCAODC_18120 pykF pyruvate kinase PykF — —
Escherichia coli ECRC101 0.93 OKFHMN_28410 ychF redox-regulated ATPase YchF 0.87 OKFHMN_27290 pykF pyruvate kinase PykF — —
Escherichia coli ECOR27 0.93 NOLOHH_20650 ychF redox-regulated ATPase YchF 0.87 NOLOHH_17810 pykF pyruvate kinase PykF — —
Escherichia coli ECRC102 0.93 NIAGMN_27825 ychF redox-regulated ATPase YchF 0.87 NIAGMN_00775 pykF pyruvate kinase PykF — —
Escherichia coli ECRC98 0.93 JDDGAC_06165 ychF redox-regulated ATPase YchF 0.87 JDDGAC_01865 pykF pyruvate kinase PykF — —
Escherichia coli ECOR38 0.93 HEPCGN_24875 ychF redox-regulated ATPase YchF 0.87 HEPCGN_05675 pykF pyruvate kinase PykF — —
Escherichia fergusonii Becca 0.93 EFB2_02724 Ribosome-binding ATPase YchF 0.87 EFB2_02316 Pyruvate kinase I low > 86
Escherichia coli Nissle 1917 0.93 ECOLIN_RS07280 redox-regulated ATPase YchF 0.87 ECOLIN_RS09375 pyruvate kinase PykF — —
Escherichia coli ECRC62 0.93 BNILDI_18805 ychF redox-regulated ATPase YchF 0.87 BNILDI_16600 pykF pyruvate kinase PykF — —
Escherichia coli BL21 0.93 ECD_01178 catalase inhibitor protein; ATPase, K+-dependent, ribosome-associated 0.87 ECD_01645 pyruvate kinase I — —
Pectobacterium carotovorum WPP14 0.93 HER17_RS10445 redox-regulated ATPase YchF 0.87 HER17_RS08960 pyruvate kinase PykF low > 75
Serratia liquefaciens MT49 0.91 IAI46_10240 redox-regulated ATPase YchF 0.90 IAI46_11185 pyruvate kinase PykF — —
Rahnella sp. WP5 0.90 EX31_RS07380 redox-regulated ATPase YchF 0.90 EX31_RS13870 pyruvate kinase PykF low > 89
Enterobacter sp. TBS_079 0.89 MPMX20_02645 Ribosome-binding ATPase YchF 0.87 MPMX20_01951 Pyruvate kinase I low > 85
Enterobacter asburiae PDN3 0.89 EX28DRAFT_0821 GTP-binding protein YchF 0.88 EX28DRAFT_1679 pyruvate kinase — —
Klebsiella michiganensis M5al 0.89 BWI76_RS17485 GTP-binding protein YchF 0.87 BWI76_RS16960 pyruvate kinase — —
Vibrio cholerae E7946 ATCC 55056 0.74 CSW01_10875 redox-regulated ATPase YchF 0.77 CSW01_02575 pyruvate kinase PykF — —
Cupriavidus basilensis FW507-4G11 0.73 RR42_RS18365 GTP-binding protein 0.34 RR42_RS19870 pyruvate kinase low > 128
Pseudomonas putida KT2440 0.73 PP_0719 ribosome-associated potassium-dependent informational ATP/GTPase 0.32 PP_4301 Pyruvate kinase low > 96
Pseudomonas fluorescens FW300-N2E3 0.72 AO353_14740 GTP-binding protein 0.31 AO353_01940 pyruvate kinase low > 101
Pseudomonas sp. RS175 0.72 PFR28_03664 Ribosome-binding ATPase YchF 0.31 PFR28_03114 Pyruvate kinase low > 88
Pseudomonas fluorescens FW300-N1B4 0.72 Pf1N1B4_2912 GTP-binding and nucleic acid-binding protein YchF 0.32 Pf1N1B4_3657 Pyruvate kinase (EC 2.7.1.40) low > 87
Pseudomonas fluorescens GW456-L13 0.72 PfGW456L13_1574 GTP-binding and nucleic acid-binding protein YchF 0.31 PfGW456L13_4299 Pyruvate kinase (EC 2.7.1.40) low > 87
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_16450 GTP-binding protein 0.31 AO356_19600 pyruvate kinase low > 104
Pseudomonas simiae WCS417 0.71 PS417_03560 GTP-binding protein 0.32 PS417_08790 pyruvate kinase low > 88
Ralstonia solanacearum GMI1000 0.71 RS_RS14520 redox-regulated ATPase YchF 0.33 RS_RS24105 pyruvate kinase low > 80
Castellaniella sp019104865 MT123 0.70 ABCV34_RS09215 redox-regulated ATPase YchF 0.33 ABCV34_RS12115 pyruvate kinase — —
Pseudomonas fluorescens SBW25-INTG 0.70 PFLU_RS03610 redox-regulated ATPase YchF 0.32 PFLU_RS08850 pyruvate kinase low > 109
Pseudomonas fluorescens SBW25 0.70 PFLU_RS03610 redox-regulated ATPase YchF 0.32 PFLU_RS08850 pyruvate kinase low > 109
Ralstonia solanacearum IBSBF1503 0.70 RALBFv3_RS06570 redox-regulated ATPase YchF 0.34 RALBFv3_RS17015 pyruvate kinase low > 76
Ralstonia solanacearum PSI07 0.69 RPSI07_RS10660 redox-regulated ATPase YchF 0.33 RPSI07_RS06385 pyruvate kinase low > 81
Variovorax sp. SCN45 0.69 GFF2141 GTP-binding and nucleic acid-binding protein YchF 0.31 GFF6584 Pyruvate kinase (EC 2.7.1.40) low > 127
Variovorax sp. OAS795 0.68 ABID97_RS24750 redox-regulated ATPase YchF 0.31 ABID97_RS24455 pyruvate kinase low > 91
Pontibacter actiniarum KMM 6156, DSM 19842 0.60 CA264_07495 GTP-binding protein YchF 0.31 CA264_00725 pyruvate kinase 0.41 23
Phaeobacter inhibens DSM 17395 0.59 PGA1_c04950 GTP-dependent nucleic acid-binding protein EngD 0.30 PGA1_c06970 pyruvate kinase PykA — —
Dinoroseobacter shibae DFL-12 0.58 Dshi_0954 GTP-binding protein YchF (RefSeq) 0.30 Dshi_0228 pyruvate kinase (RefSeq) — —
Fusobacterium nucleatum SB010 0.58 HUW76_08540 redox-regulated ATPase YchF 0.62 HUW76_00910 pyruvate kinase PykF — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.58 Echvi_2525 GTP-binding protein YchF 0.33 Echvi_2317 pyruvate kinase low > 79
Bacteroides thetaiotaomicron VPI-5482 0.57 BT3116 GTP-binding protein (NCBI ptt file) 0.35 BT2841 pyruvate kinase (NCBI ptt file) — —
Bacteroides ovatus ATCC 8483 0.57 BACOVA_02821 GTP-binding protein YchF 0.36 BACOVA_02121 pyruvate kinase — —
Magnetospirillum magneticum AMB-1 0.57 AMB_RS21985 redox-regulated ATPase YchF 0.32 AMB_RS16010 pyruvate kinase — —
Azospirillum sp. SherDot2 0.57 MPMX19_01641 Ribosome-binding ATPase YchF 0.34 MPMX19_04460 Pyruvate kinase — —
Parabacteroides merdae CL09T00C40 0.57 HMPREF1078_RS06345 redox-regulated ATPase YchF 0.33 HMPREF1078_RS04695 pyruvate kinase low > 61
Pedobacter sp. GW460-11-11-14-LB5 0.57 CA265_RS13275 redox-regulated ATPase YchF 0.32 CA265_RS18740 pyruvate kinase — —
Phocaeicola dorei CL03T12C01 0.56 ABI39_RS05450 redox-regulated ATPase YchF 0.35 ABI39_RS07010 pyruvate kinase low > 72
Phocaeicola vulgatus CL09T03C04 0.56 HMPREF1058_RS11490 redox-regulated ATPase YchF 0.35 HMPREF1058_RS09670 pyruvate kinase — —
Azospirillum brasilense Sp245 0.56 AZOBR_RS30645 GTP-binding protein YchF 0.33 AZOBR_RS06845 pyruvate kinase — —
Rhodospirillum rubrum S1H 0.56 Rru_A3748 hypothetical protein (NCBI) 0.33 Rru_A2465 Pyruvate kinase (NCBI) — —
Caulobacter crescentus NA1000 0.55 CCNA_00512 GTP-binding protein, probable translation factor 0.29 CCNA_02130 pyruvate kinase low > 66
Brevundimonas sp. GW460-12-10-14-LB2 0.55 A4249_RS09035 redox-regulated ATPase YchF 0.28 A4249_RS02440 pyruvate kinase — —
Caulobacter crescentus NA1000 Δfur 0.55 CCNA_00512 GTP-binding protein, probable translation factor 0.29 CCNA_02130 pyruvate kinase low > 67
Bosea sp. OAE506 0.55 ABIE41_RS11295 redox-regulated ATPase YchF 0.31 ABIE41_RS06285 pyruvate kinase — —
Desulfovibrio vulgaris Hildenborough JW710 0.53 DVU1429 GTP-binding protein (TIGR) 0.28 DVU2514 pyk pyruvate kinase (TIGR) low > 55
Bacteroides stercoris CC31F 0.52 HMPREF1181_RS02000 redox-regulated ATPase YchF 0.35 HMPREF1181_RS01240 pyruvate kinase low > 56
Desulfovibrio vulgaris Miyazaki F 0.51 DvMF_0234 GTP-dependent nucleic acid-binding protein EngD (RefSeq) 0.27 DvMF_0965 pyruvate kinase (RefSeq) low > 51
Bifidobacterium breve UCC2003 0.47 BBR_RS14650 redox-regulated ATPase YchF 0.33 BBR_RS14295 pyruvate kinase — —
Mycobacterium tuberculosis H37Rv 0.43 Rv1112 Probable GTP binding protein 0.35 Rv1617 Probable pyruvate kinase PykA — —

Not shown: 35 genomes with orthologs for IAI47_11310 only; 3 genomes with orthologs for IAI47_10840 only