Conservation of cofitness between IAI47_08820 and IAI47_03580 in Pantoea sp. MT58

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_08820 ATP-dependent DNA helicase 1.0 IAI47_03580 radical SAM family heme chaperone HemW 0.21 6
Serratia liquefaciens MT49 0.81 IAI46_14550 ATP-dependent DNA helicase 0.82 IAI46_21435 radical SAM family heme chaperone HemW low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.80 GFF2823 DinG family ATP-dependent helicase YoaA 0.81 GFF3058 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB low > 78
Escherichia coli BL21 0.80 ECD_01778 putative ATP-dependent helicase, DinG family 0.83 ECD_02785 HemN family putative oxidoreductase
Escherichia coli ECRC62 0.80 BNILDI_15885 yoaA putative ATP-dependent DNA helicase YoaA 0.82 BNILDI_09685 hemW radical SAM family heme chaperone HemW
Escherichia coli ECRC101 0.80 MCAODC_18830 yoaA putative ATP-dependent DNA helicase YoaA 0.82 MCAODC_09755 hemW radical SAM family heme chaperone HemW
Escherichia coli ECRC99 0.80 KEDOAH_01530 yoaA putative ATP-dependent DNA helicase YoaA 0.82 KEDOAH_08905 hemW radical SAM family heme chaperone HemW
Escherichia coli ECRC101 0.80 OKFHMN_26580 yoaA putative ATP-dependent DNA helicase YoaA 0.82 OKFHMN_19235 hemW radical SAM family heme chaperone HemW
Escherichia fergusonii Becca 0.80 EFB2_02192 putative ATP-dependent DNA helicase YoaA 0.83 EFB2_00947 Heme chaperone HemW low > 86
Escherichia coli ECRC102 0.80 NIAGMN_01485 yoaA putative ATP-dependent DNA helicase YoaA 0.82 NIAGMN_17000 hemW radical SAM family heme chaperone HemW
Escherichia coli ECOR38 0.80 HEPCGN_04970 yoaA putative ATP-dependent DNA helicase YoaA 0.83 HEPCGN_18540 hemW radical SAM family heme chaperone HemW low > 85
Escherichia coli Nissle 1917 0.80 ECOLIN_RS10055 ATP-dependent DNA helicase 0.82 ECOLIN_RS16435 radical SAM family heme chaperone HemW
Escherichia coli ECRC98 0.80 JDDGAC_01155 yoaA putative ATP-dependent DNA helicase YoaA 0.82 JDDGAC_22865 hemW radical SAM family heme chaperone HemW
Escherichia coli ECOR27 0.80 NOLOHH_17100 yoaA putative ATP-dependent DNA helicase YoaA 0.82 NOLOHH_11105 hemW radical SAM family heme chaperone HemW low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.80 OHPLBJKB_01925 putative ATP-dependent helicase DinG 0.82 OHPLBJKB_00761 Oxygen-independent coproporphyrinogen-III oxidase-like protein YqeR 0.51 32
Escherichia coli BW25113 0.80 b1808 yoaA conserved protein with nucleoside triphosphate hydrolase domain (NCBI) 0.82 b2955 yggW coproporphyrinogen III oxidase (NCBI) low > 76
Dickeya dadantii 3937 0.79 DDA3937_RS11240 ATP-dependent DNA helicase 0.82 DDA3937_RS17325 radical SAM family heme chaperone HemW low > 74
Dickeya dianthicola 67-19 0.79 HGI48_RS11275 ATP-dependent DNA helicase 0.81 HGI48_RS17370 radical SAM family heme chaperone HemW low > 71
Pectobacterium carotovorum WPP14 0.78 HER17_RS11290 ATP-dependent DNA helicase 0.83 HER17_RS03785 radical SAM family heme chaperone HemW low > 75
Erwinia tracheiphila SCR3 0.78 LU632_RS13150 ATP-dependent DNA helicase 0.85 LU632_RS05445 hemW radical SAM family heme chaperone HemW low > 74
Dickeya dianthicola ME23 0.78 DZA65_RS11620 ATP-dependent DNA helicase 0.81 DZA65_RS18460 radical SAM family heme chaperone HemW low > 75
Enterobacter asburiae PDN3 0.78 EX28DRAFT_0750 Rad3-related DNA helicases 0.83 EX28DRAFT_2993 putative oxygen-independent coproporphyrinogen III oxidase low > 76
Enterobacter sp. TBS_079 0.78 MPMX20_02714 putative ATP-dependent DNA helicase YoaA 0.83 MPMX20_03813 Heme chaperone HemW low > 85
Klebsiella michiganensis M5al 0.78 BWI76_RS17815 ATP-dependent helicase 0.83 BWI76_RS24120 YggW family oxidoreductase low > 92
Rahnella sp. WP5 0.77 EX31_RS10615 ATP-dependent DNA helicase 0.82 EX31_RS02710 radical SAM family heme chaperone HemW low > 89
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_09930 ATP-dependent DNA helicase 0.67 CSW01_02425 YggW family oxidoreductase low > 62
Alteromonas macleodii MIT1002 0.51 MIT1002_02593 putative ATP-dependent helicase DinG 0.60 MIT1002_00939 Oxygen-independent coproporphyrinogen-III oxidase 1 low > 70
Shewanella oneidensis MR-1 0.44 SO2081 ATP-dependent helicase, DinG family (NCBI ptt file) 0.60 SO3359 oxygen-independent coproporphyrinogen III oxidase, putative (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.44 Shewana3_1859 helicase c2 (RefSeq) 0.60 Shewana3_1188 putative oxygen-independent coproporphyrinogen III oxidase (RefSeq) low > 73
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS07580 helicase 0.48 RR42_RS04880 coproporphyrinogen III oxidase low > 128
Kangiella aquimarina DSM 16071 0.42 B158DRAFT_2492 Rad3-related DNA helicases 0.55 B158DRAFT_0201 coproporphyrinogen III oxidase, anaerobic (EC 1.3.99.22) low > 40
Rhodanobacter denitrificans MT42 0.41 LRK55_RS12465 ATP-dependent DNA helicase 0.47 LRK55_RS11460 radical SAM family heme chaperone HemW low > 63
Rhodanobacter denitrificans FW104-10B01 0.41 LRK54_RS12765 ATP-dependent DNA helicase 0.46 LRK54_RS11735 radical SAM family heme chaperone HemW low > 59
Shewanella loihica PV-4 0.41 Shew_2196 helicase c2 (RefSeq) 0.61 Shew_1131 putative oxygen-independent coproporphyrinogen III oxidase (RefSeq) low > 60
Dechlorosoma suillum PS 0.41 Dsui_2149 DNA helicase, Rad3 0.49 Dsui_0491 putative oxygen-independent coproporphyrinogen III oxidase low > 51
Rhodanobacter sp. FW510-T8 0.41 OKGIIK_02195 dinG helicase 0.45 OKGIIK_12160 hemW radical SAM family heme chaperone HemW low > 52
Ralstonia solanacearum UW163 0.41 UW163_RS14840 ATP-dependent DNA helicase 0.45 UW163_RS10365 oxygen-independent coproporphyrinogen III oxidase-like protein
Ralstonia solanacearum IBSBF1503 0.41 RALBFv3_RS01530 ATP-dependent DNA helicase 0.45 RALBFv3_RS03355 oxygen-independent coproporphyrinogen III oxidase-like protein low > 76
Dyella japonica UNC79MFTsu3.2 0.41 ABZR86_RS19750 ATP-dependent DNA helicase 0.47 ABZR86_RS11910 radical SAM family heme chaperone HemW low > 74
Ralstonia solanacearum PSI07 0.41 RPSI07_RS15960 ATP-dependent DNA helicase 0.45 RPSI07_RS13830 oxygen-independent coproporphyrinogen III oxidase-like protein
Ralstonia sp. UNC404CL21Col 0.40 ABZR87_RS13325 ATP-dependent DNA helicase 0.45 ABZR87_RS15265 radical SAM family heme chaperone HemW low > 80
Ralstonia solanacearum GMI1000 0.40 RS_RS08195 ATP-dependent DNA helicase 0.45 RS_RS10840 oxygen-independent coproporphyrinogen III oxidase-like protein low > 80
Shewanella amazonensis SB2B 0.39 Sama_1940 ATP-dependent helicase DinG (RefSeq) 0.57 Sama_2483 oxygen-independent coproporphyrinogen III oxidase, putative (RefSeq) low > 62
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS14855 helicase 0.48 HSERO_RS10665 coproporphyrinogen III oxidase low > 78
Xanthomonas campestris pv. campestris strain 8004 0.38 Xcc-8004.1496.1 DinG family ATP-dependent helicase YoaA 0.48 Xcc-8004.1224.1 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB low > 74
Paraburkholderia sabiae LMG 24235 0.38 QEN71_RS06060 ATP-dependent DNA helicase 0.46 QEN71_RS03635 radical SAM family heme chaperone HemW 0.49 153
Lysobacter sp. OAE881 0.38 ABIE51_RS05195 ATP-dependent DNA helicase 0.47 ABIE51_RS17300 radical SAM family heme chaperone HemW low > 62
Burkholderia phytofirmans PsJN 0.38 BPHYT_RS12495 helicase 0.46 BPHYT_RS15335 coproporphyrinogen III oxidase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.38 H281DRAFT_00533 ATP-dependent DNA helicase DinG 0.47 H281DRAFT_04010 oxygen-independent coproporphyrinogen-3 oxidase low > 103
Paraburkholderia graminis OAS925 0.38 ABIE53_002724 ATP-dependent DNA helicase DinG 0.47 ABIE53_003236 putative oxygen-independent coproporphyrinogen III oxidase low > 113
Castellaniella sp019104865 MT123 0.35 ABCV34_RS01875 ATP-dependent DNA helicase 0.44 ABCV34_RS03525 radical SAM family heme chaperone HemW low > 48
Acidovorax sp. GW101-3H11 0.34 Ac3H11_2460 DinG family ATP-dependent helicase YoaA 0.42 Ac3H11_3672 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB low > 79
Variovorax sp. OAS795 0.34 ABID97_RS14180 ATP-dependent DNA helicase 0.47 ABID97_RS23630 radical SAM family heme chaperone HemW low > 91
Variovorax sp. SCN45 0.33 GFF986 DinG family ATP-dependent helicase YoaA 0.45 GFF2383 Oxygen-independent coproporphyrinogen-III oxidase-like protein YggW low > 127
Mycobacterium tuberculosis H37Rv 0.21 Rv1329c Probable ATP-dependent helicase DinG 0.23 Rv2388c Probable oxygen-independent coproporphyrinogen III oxidase HemN (coproporphyrinogenase) (coprogen oxidase) low > 58
Hydrogenophaga sp. GW460-11-11-14-LB1 0.18 GFF4872 DinG family ATP-dependent helicase YoaA 0.45 GFF3256 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB low > 90

Not shown: 1 genomes with orthologs for IAI47_08820 only; 30 genomes with orthologs for IAI47_03580 only