| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Herbaspirillum seropedicae SmR1 | 1.0 | HSERO_RS23825 | | hypothetical protein | 1.0 | HSERO_RS19510 | | threonine dehydratase | 0.45 | 18 |
| Burkholderia phytofirmans PsJN | 0.29 | BPHYT_RS19575 | | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | 0.69 | BPHYT_RS03145 | | threonine dehydratase | — | — |
| Paraburkholderia graminis OAS925 | 0.28 | ABIE53_000291 | | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein | 0.68 | ABIE53_002293 | | threonine dehydratase | low | > 113 |
| Ralstonia sp. UNC404CL21Col | 0.27 | ABZR87_RS12805 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.71 | ABZR87_RS07360 | | threonine ammonia-lyase, biosynthetic | low | > 80 |
| Paraburkholderia sabiae LMG 24235 | 0.26 | QEN71_RS29485 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.68 | QEN71_RS01985 | | threonine ammonia-lyase, biosynthetic | low | > 153 |
| Ralstonia solanacearum GMI1000 | 0.25 | RS_RS08635 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.73 | RS_RS02225 | | threonine ammonia-lyase, biosynthetic | — | — |
| Ralstonia solanacearum PSI07 | 0.25 | RPSI07_RS16115 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.73 | RPSI07_RS21810 | | threonine ammonia-lyase, biosynthetic | low | > 81 |
| Ralstonia solanacearum IBSBF1503 | 0.24 | RALBFv3_RS01360 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.72 | RALBFv3_RS11395 | | threonine ammonia-lyase, biosynthetic | low | > 76 |
| Ralstonia solanacearum UW163 | 0.24 | UW163_RS14670 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.72 | UW163_RS02190 | | threonine ammonia-lyase, biosynthetic | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.21 | RR42_RS09010 | | FAD-dependent cmnm(5)s(2)U34 oxidoreductase | 0.73 | RR42_RS02315 | | threonine dehydratase | low | > 128 |
| Dechlorosoma suillum PS | 0.21 | Dsui_2868 | | tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain protein | 0.70 | Dsui_0728 | | threonine ammonia-lyase, biosynthetic, long form | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.20 | GFF1945 | | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase | 0.47 | GFF2900 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | low | > 78 |
| Escherichia coli ECOR27 | 0.20 | NOLOHH_14275 | mnmC | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.48 | NOLOHH_06770 | ilvA | threonine ammonia-lyase, biosynthetic | low | > 75 |
| Escherichia coli Nissle 1917 | 0.20 | ECOLIN_RS13465 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.47 | ECOLIN_RS21670 | | threonine ammonia-lyase, biosynthetic | low | > 55 |
| Escherichia coli ECOR38 | 0.20 | HEPCGN_21845 | mnmC | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.47 | HEPCGN_13345 | ilvA | threonine ammonia-lyase, biosynthetic | low | > 87 |
| Escherichia fergusonii Becca | 0.20 | EFB2_01534 | | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | 0.47 | EFB2_04864 | | L-threonine dehydratase biosynthetic IlvA | low | > 86 |
| Escherichia coli BW25113 | 0.20 | b2324 | b2324 | putative peptidase (VIMSS) | 0.47 | b3772 | ilvA | threonine dehydratase (NCBI) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.20 | OHPLBJKB_01381 | | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | 0.47 | OHPLBJKB_04281 | | L-threonine dehydratase biosynthetic IlvA | low | > 73 |
| Pseudomonas fluorescens FW300-N1B4 | 0.20 | Pf1N1B4_373 | | 5-methylaminomethyl-2-thiouridine-forming enzyme mnmC | 0.56 | Pf1N1B4_2280 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | low | > 87 |
| Escherichia coli ECRC99 | 0.19 | KEDOAH_05555 | mnmC | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.48 | KEDOAH_13515 | ilvA | threonine ammonia-lyase, biosynthetic | — | — |
| Escherichia coli ECRC98 | 0.19 | JDDGAC_26600 | mnmC | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.48 | JDDGAC_18255 | ilvA | threonine ammonia-lyase, biosynthetic | low | > 86 |
| Escherichia coli ECRC100 | 0.19 | OKFHMN_22640 | mnmC | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.48 | OKFHMN_14635 | ilvA | threonine ammonia-lyase, biosynthetic | low | > 80 |
| Pseudomonas fluorescens FW300-N2E3 | 0.19 | AO353_02165 | | FAD-dependent cmnm(5)s(2)U34 oxidoreductase | 0.57 | AO353_08485 | | threonine dehydratase | low | > 101 |
| Escherichia coli ECRC101 | 0.19 | MCAODC_13680 | mnmC | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.48 | MCAODC_05140 | ilvA | threonine ammonia-lyase, biosynthetic | low | > 87 |
| Escherichia coli ECRC62 | 0.19 | BNILDI_13195 | mnmC | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.48 | BNILDI_04755 | ilvA | threonine ammonia-lyase, biosynthetic | low | > 75 |
| Escherichia coli ECRC102 | 0.19 | NIAGMN_20415 | mnmC | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.48 | NIAGMN_12390 | ilvA | threonine ammonia-lyase, biosynthetic | — | — |
| Escherichia coli BL21 | 0.19 | ECD_02249 | | fused 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase and FAD-dependent demodification enzyme | 0.47 | ECD_03650 | | l-threonine dehydratase, biosynthetic; also known as threonine deaminase | low | > 61 |
| Pseudomonas stutzeri RCH2 | 0.19 | Psest_1634 | | tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain | 0.58 | Psest_3866 | | threonine ammonia-lyase, biosynthetic, long form | low | > 67 |
| Klebsiella michiganensis M5al | 0.19 | BWI76_RS20410 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.47 | BWI76_RS00980 | | PLP-dependent threonine dehydratase | low | > 92 |
| Pseudomonas fluorescens GW456-L13 | 0.19 | PfGW456L13_2155 | | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase | 0.56 | PfGW456L13_949 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | low | > 87 |
| Pseudomonas sp. S08-1 | 0.19 | OH686_20990 | | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase / FAD-dependent cmnm(5)s(2)U34 oxidoreductase | 0.57 | OH686_11400 | | threonine ammonia-lyase, biosynthetic | low | > 80 |
| Pseudomonas fluorescens FW300-N2C3 | 0.19 | AO356_03570 | | FAD-dependent cmnm(5)s(2)U34 oxidoreductase | 0.56 | AO356_10330 | | threonine dehydratase | low | > 104 |
| Enterobacter asburiae PDN3 | 0.18 | EX28DRAFT_0280 | | tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain | 0.47 | EX28DRAFT_4444 | | threonine ammonia-lyase, biosynthetic, long form | low | > 76 |
| Pseudomonas sp. RS175 | 0.18 | PFR28_00884 | | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | 0.56 | PFR28_04834 | | L-threonine dehydratase biosynthetic IlvA | low | > 88 |
| Vibrio cholerae E7946 ATCC 55056 | 0.18 | CSW01_10535 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.47 | CSW01_00135 | | threonine ammonia-lyase, biosynthetic | low | > 62 |
| Pseudomonas fluorescens FW300-N2E2 | 0.18 | Pf6N2E2_2541 | | 5-methylaminomethyl-2-thiouridine-forming enzyme mnmC | 0.56 | Pf6N2E2_3938 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | low | > 103 |
| Serratia liquefaciens MT49 | 0.18 | IAI46_18000 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.47 | IAI46_24340 | | threonine ammonia-lyase, biosynthetic | low | > 86 |
| Pectobacterium carotovorum WPP14 | 0.18 | HER17_RS06960 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.46 | HER17_RS01080 | | threonine ammonia-lyase, biosynthetic | low | > 75 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.17 | Psyr_3742 | | FAD dependent oxidoreductase:Protein of unknown function DUF752 | 0.55 | Psyr_4846 | | L-threonine ammonia-lyase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.17 | Psyr_3742 | | FAD dependent oxidoreductase:Protein of unknown function DUF752 | 0.55 | Psyr_4846 | | L-threonine ammonia-lyase | low | > 86 |
| Enterobacter sp. TBS_079 | 0.17 | MPMX20_03259 | | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | 0.47 | MPMX20_04498 | | L-threonine dehydratase biosynthetic IlvA | low | > 85 |
| Pseudomonas simiae WCS417 | 0.17 | PS417_19225 | | FAD-dependent cmnm(5)s(2)U34 oxidoreductase | 0.56 | PS417_27010 | | threonine dehydratase | low | > 88 |
| Pseudomonas putida KT2440 | 0.17 | PP_1751 | | methyltransferase/FAD-dependent oxidoreductase | 0.56 | PP_5149 | | threonine deaminase | low | > 96 |
| Marinobacter adhaerens HP15 | 0.17 | HP15_1540 | | protein YfcK | 0.56 | HP15_3213 | | threonine dehydratase biosynthetic | low | > 73 |
| Pantoea sp. MT58 | 0.16 | IAI47_06175 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.47 | IAI47_01040 | | threonine ammonia-lyase, biosynthetic | low | > 76 |
| Dickeya dadantii 3937 | 0.16 | DDA3937_RS14515 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.49 | DDA3937_RS20150 | | threonine ammonia-lyase, biosynthetic | low | > 74 |
| Dickeya dianthicola ME23 | 0.16 | DZA65_RS15420 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.47 | DZA65_RS21330 | | threonine ammonia-lyase, biosynthetic | low | > 75 |
| Dickeya dianthicola 67-19 | 0.16 | HGI48_RS14485 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.49 | HGI48_RS20290 | | threonine ammonia-lyase, biosynthetic | low | > 71 |
| Pseudomonas fluorescens SBW25 | 0.16 | PFLU_RS21190 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.56 | PFLU_RS28665 | | threonine ammonia-lyase, biosynthetic | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.16 | PFLU_RS21190 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.56 | PFLU_RS28665 | | threonine ammonia-lyase, biosynthetic | low | > 109 |
| Rahnella sp. WP5 | 0.15 | EX31_RS19660 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.46 | EX31_RS15010 | | threonine ammonia-lyase, biosynthetic | low | > 89 |
| Shewanella sp. ANA-3 | 0.15 | Shewana3_1474 | | FAD dependent oxidoreductase (RefSeq) | 0.48 | Shewana3_0359 | | threonine dehydratase (RefSeq) | low | > 73 |
| Acidovorax sp. GW101-3H11 | 0.14 | Ac3H11_579 | | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase | 0.71 | Ac3H11_2042 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | low | > 79 |
| Erwinia tracheiphila SCR3 | 0.14 | LU632_RS07800 | mnmC | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.46 | LU632_RS24395 | ilvA | threonine ammonia-lyase, biosynthetic | low | > 74 |
| Variovorax sp. SCN45 | 0.14 | GFF1245 | | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase | 0.70 | GFF5246 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | low | > 127 |
| Shewanella oneidensis MR-1 | 0.13 | SO3073 | | conserved hypothetical protein (NCBI ptt file) | 0.49 | SO4344 | ilvA | threonine dehydratase (NCBI ptt file) | low | > 76 |
| Castellaniella sp019104865 MT123 | 0.13 | ABCV34_RS09580 | | FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.71 | ABCV34_RS14460 | | threonine ammonia-lyase, biosynthetic | low | > 48 |
| Alteromonas macleodii MIT1002 | 0.12 | MIT1002_02542 | | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | 0.46 | MIT1002_04040 | | L-threonine dehydratase biosynthetic IlvA | low | > 70 |
| Shewanella loihica PV-4 | 0.12 | Shew_2411 | | FAD dependent oxidoreductase (RefSeq) | 0.48 | Shew_0293 | | threonine dehydratase (RefSeq) | 0.35 | 27 |
| Variovorax sp. OAS795 | 0.12 | ABID97_RS15455 | | FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.67 | ABID97_RS07000 | | threonine ammonia-lyase, biosynthetic | low | > 91 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.11 | A4249_RS15340 | | tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD | 0.52 | A4249_RS00615 | | threonine ammonia-lyase, biosynthetic | low | > 48 |
| Acinetobacter radioresistens SK82 | 0.09 | MPMX26_02642 | | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | 0.47 | MPMX26_01278 | | L-threonine dehydratase biosynthetic IlvA | low | > 36 |
Not shown: 3 genomes with orthologs for HSERO_RS23825 only; 7 genomes with orthologs for HSERO_RS19510 only