Conservation of cofitness between HSERO_RS01560 and HSERO_RS16840 in Herbaspirillum seropedicae SmR1

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS01560 transporter 1.0 HSERO_RS16840 competence damage-inducible protein A 0.34 15
Dechlorosoma suillum PS 0.79 Dsui_2026 hydrophobe/amphiphile efflux-1 (HAE1) family transporter 0.46 Dsui_0710 competence/damage-inducible protein CinA-like protein low > 51
Paraburkholderia sabiae LMG 24235 0.77 QEN71_RS20105 efflux RND transporter permease subunit 0.56 QEN71_RS27055 CinA family protein low > 153
Burkholderia phytofirmans PsJN 0.77 BPHYT_RS22515 multidrug efflux RND transporter permease subunit 0.53 BPHYT_RS16895 competence damage-inducible protein A low > 109
Paraburkholderia bryophila 376MFSha3.1 0.76 H281DRAFT_03190 multidrug efflux pump 0.52 H281DRAFT_06305 nicotinamide-nucleotide amidase low > 103
Paraburkholderia graminis OAS925 0.76 ABIE53_004106 multidrug efflux pump 0.52 ABIE53_003546 nicotinamide-nucleotide amidase low > 113
Azospirillum brasilense Sp245 0.73 AZOBR_RS28205 transporter 0.42 AZOBR_RS14405 competence damage-inducible protein A low > 97
Ralstonia sp. UNC404CL21Col 0.73 ABZR87_RS19400 efflux RND transporter permease subunit 0.55 ABZR87_RS01580 CinA family protein low > 80
Ralstonia solanacearum PSI07 0.72 RPSI07_RS05175 multidrug efflux RND transporter permease subunit 0.54 RPSI07_RS11330 CinA family protein — —
Ralstonia solanacearum UW163 0.72 UW163_RS20755 multidrug efflux RND transporter permease subunit 0.54 UW163_RS07710 CinA family protein — —
Ralstonia solanacearum IBSBF1503 0.71 RALBFv3_RS18375 multidrug efflux RND transporter permease subunit 0.54 RALBFv3_RS05915 CinA family protein low > 76
Azospirillum sp. SherDot2 0.71 MPMX19_02968 multidrug efflux RND transporter permease subunit OqxB28 0.41 MPMX19_01107 Nicotinamide-nucleotide amidohydrolase PncC low > 112
Ralstonia solanacearum GMI1000 0.71 RS_RS22490 multidrug efflux RND transporter permease subunit 0.54 RS_RS13860 CinA family protein — —
Cupriavidus basilensis FW507-4G11 0.69 RR42_RS27685 multidrug efflux RND transporter permease subunit 0.56 RR42_RS17625 damage-inducible protein CinA low > 128
Acidovorax sp. GW101-3H11 0.69 Ac3H11_258 RND multidrug efflux transporter; Acriflavin resistance protein 0.46 Ac3H11_738 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS low > 79
Variovorax sp. SCN45 0.68 GFF429 RND efflux system, inner membrane transporter 0.50 GFF6273 Nicotinamide-nucleotide amidase (EC 3.5.1.42) low > 127
Magnetospirillum magneticum AMB-1 0.67 AMB_RS09480 multidrug efflux RND transporter permease subunit 0.43 AMB_RS12830 CinA family protein — —
Variovorax sp. OAS795 0.67 ABID97_RS17350 efflux RND transporter permease subunit 0.46 ABID97_RS04855 CinA family protein low > 91
Rhizobium sp. OAE497 0.67 ABIE40_RS14875 multidrug efflux RND transporter permease subunit 0.37 ABIE40_RS09070 CinA family protein low > 107
Pseudomonas sp. RS175 0.66 PFR28_02013 multidrug efflux RND transporter permease subunit OqxB10 0.47 PFR28_00471 Nicotinamide-nucleotide amidohydrolase PncC low > 88
Sinorhizobium meliloti 1021 0.66 SMc01095 multidrug-efflux system transmembrane protein 0.38 SMc01039 hypothetical protein low > 103
Agrobacterium fabrum C58 0.63 Atu2483 AcrB/AcrD/AcrF family protein 0.34 Atu1442 competence/damage-inducible protein CinA low > 89
Pseudomonas fluorescens FW300-N2C3 0.62 AO356_27605 transporter 0.46 AO356_05675 damage-inducible protein CinA low > 104
Pseudomonas putida KT2440 0.61 PP_3426 Multidrug efflux RND transporter MexF 0.51 PP_1628 NMN amidohydrolase low > 96
Pseudomonas simiae WCS417 0.61 PS417_13190 transporter 0.44 PS417_05810 damage-inducible protein CinA low > 88
Pseudomonas fluorescens SBW25-INTG 0.61 PFLU_RS14260 efflux RND transporter permease subunit 0.45 PFLU_RS05880 CinA family protein 0.14 57
Pseudomonas fluorescens SBW25 0.61 PFLU_RS14260 efflux RND transporter permease subunit 0.45 PFLU_RS05880 CinA family protein low > 109
Pseudomonas fluorescens FW300-N2E3 0.61 AO353_23960 transporter 0.46 AO353_16800 damage-inducible protein CinA low > 101
Pseudomonas fluorescens GW456-L13 0.61 PfGW456L13_3060 Multidrug efflux transporter MexF 0.45 PfGW456L13_4669 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS low > 87
Rhodanobacter denitrificans FW104-10B01 0.61 LRK54_RS08140 multidrug efflux RND transporter permease subunit 0.41 LRK54_RS14975 CinA family protein low > 59
Pseudomonas fluorescens FW300-N1B4 0.61 Pf1N1B4_4864 Multidrug efflux transporter MexF 0.46 Pf1N1B4_3142 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS low > 87
Pseudomonas fluorescens FW300-N2E2 0.61 Pf6N2E2_824 Multidrug efflux transporter MexF 0.46 Pf6N2E2_2994 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS low > 103
Rhodanobacter denitrificans MT42 0.61 LRK55_RS07890 efflux RND transporter permease subunit 0.41 LRK55_RS14690 CinA family protein low > 63
Rhodanobacter sp. FW510-T8 0.60 OKGIIK_14955 oqxB multidrug efflux RND transporter permease subunit 0.41 OKGIIK_03735 pncC damage-inducible protein CinA low > 52
Pseudomonas stutzeri RCH2 0.60 Psest_2144 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 0.48 Psest_2873 competence/damage-inducible protein CinA C-terminal domain low > 67
Pseudomonas sp. S08-1 0.60 OH686_01005 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) 0.48 OH686_18200 Nicotinamide-nucleotide amidase low > 80
Dyella japonica UNC79MFTsu3.2 0.60 ABZR86_RS15400 efflux RND transporter permease subunit 0.42 ABZR86_RS00655 CinA family protein low > 74
Alteromonas macleodii MIT1002 0.58 MIT1002_02998 Efflux pump membrane transporter BepE 0.42 MIT1002_00954 Nicotinamide-nucleotide amidohydrolase PncC low > 70
Pantoea sp. MT58 0.57 IAI47_10310 multidrug efflux RND transporter permease subunit OqxB 0.40 IAI47_04295 nicotinamide-nucleotide amidase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.56 GFF4246 RND efflux system, inner membrane transporter CmeB 0.43 GFF4694 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS low > 78
Xanthomonas campestris pv. campestris strain 8004 0.56 Xcc-8004.3477.1 RND efflux system, inner membrane transporter CmeB 0.42 Xcc-8004.3118.1 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS low > 74
Klebsiella michiganensis M5al 0.55 BWI76_RS12955 multidrug efflux RND transporter permease subunit OqxB 0.43 BWI76_RS22185 hypothetical protein low > 92
Rahnella sp. WP5 0.55 EX31_RS01495 multidrug efflux RND transporter permease subunit 0.46 EX31_RS07805 nicotinamide-nucleotide amidase low > 89
Enterobacter sp. TBS_079 0.55 MPMX20_01155 multidrug efflux RND transporter permease subunit OqxB3 0.43 MPMX20_03581 Nicotinamide-nucleotide amidohydrolase PncC low > 85
Enterobacter asburiae PDN3 0.54 EX28DRAFT_1472 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 0.43 EX28DRAFT_2786 amidohydrolase, PncC family low > 76
Serratia liquefaciens MT49 0.54 IAI46_13385 efflux RND transporter permease subunit 0.43 IAI46_03835 nicotinamide-nucleotide amidase low > 86
Lysobacter sp. OAE881 0.53 ABIE51_RS01060 multidrug efflux RND transporter permease subunit 0.40 ABIE51_RS07790 CinA family protein low > 62
Brevundimonas sp. GW460-12-10-14-LB2 0.45 A4249_RS09925 multidrug efflux RND transporter permease subunit 0.38 A4249_RS04795 CinA family protein low > 48

Not shown: 7 genomes with orthologs for HSERO_RS01560 only; 33 genomes with orthologs for HSERO_RS16840 only