Conservation of cofitness between HSERO_RS17660 and HSERO_RS16500 in Herbaspirillum seropedicae SmR1

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS17660 flagellar hook protein FlgE 1.0 HSERO_RS16500 3-isopropylmalate dehydrogenase 0.34 9
Ralstonia solanacearum IBSBF1503 0.40 RALBFv3_RS21725 flagellar hook protein FlgE 0.88 RALBFv3_RS02610 3-isopropylmalate dehydrogenase low > 76
Ralstonia solanacearum UW163 0.40 UW163_RS17460 flagellar hook protein FlgE 0.88 UW163_RS11115 3-isopropylmalate dehydrogenase — —
Ralstonia solanacearum GMI1000 0.40 RS_RS18810 flagellar hook protein FlgE 0.87 RS_RS09990 3-isopropylmalate dehydrogenase low > 80
Ralstonia solanacearum PSI07 0.39 RPSI07_RS01405 flagellar hook protein FlgE 0.87 RPSI07_RS14705 3-isopropylmalate dehydrogenase low > 81
Enterobacter sp. TBS_079 0.39 MPMX20_01755 Flagellar hook protein FlgE 0.49 MPMX20_00768 3-isopropylmalate dehydrogenase low > 85
Dickeya dadantii 3937 0.38 DDA3937_RS13465 flagellar hook protein FlgE 0.48 DDA3937_RS18120 3-isopropylmalate dehydrogenase low > 74
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS22275 flagellar hook protein FlgE 0.87 ABZR87_RS14530 3-isopropylmalate dehydrogenase low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.37 OHPLBJKB_02589 Flagellar hook protein FlgE 0.48 OHPLBJKB_03584 3-isopropylmalate dehydrogenase low > 73
Dickeya dianthicola ME23 0.37 DZA65_RS13995 flagellar hook protein FlgE 0.48 DZA65_RS19205 3-isopropylmalate dehydrogenase low > 75
Pantoea sp. MT58 0.37 IAI47_12150 flagellar hook protein FlgE 0.47 IAI47_16005 3-isopropylmalate dehydrogenase low > 76
Escherichia coli BW25113 0.37 b1076 flgE flagellar hook protein E (NCBI) 0.48 b0073 leuB 3-isopropylmalate dehydrogenase (VIMSS) low > 76
Escherichia fergusonii Becca 0.37 EFB2_02898 Flagellar hook protein FlgE 0.48 EFB2_03972 3-isopropylmalate dehydrogenase low > 86
Escherichia coli Nissle 1917 0.37 ECOLIN_RS06230 flagellar hook protein FlgE 0.48 ECOLIN_RS00395 3-isopropylmalate dehydrogenase — —
Escherichia coli ECRC101 0.37 MCAODC_23020 flgE flagellar hook protein FlgE 0.48 MCAODC_01235 leuB 3-isopropylmalate dehydrogenase low > 87
Escherichia coli BL21 0.37 ECD_01072 flagellar hook protein 0.48 ECD_00075 3-isopropylmalate dehydrogenase, NAD(+)-dependent low > 61
Escherichia coli ECRC98 0.37 JDDGAC_07320 flgE flagellar hook protein FlgE 0.48 JDDGAC_14315 leuB 3-isopropylmalate dehydrogenase low > 86
Escherichia coli ECRC62 0.37 BNILDI_19350 flgE flagellar hook protein FlgE 0.48 BNILDI_08545 leuA 2-isopropylmalate synthase low > 75
Escherichia coli ECRC99 0.37 KEDOAH_24095 flgE flagellar hook protein FlgE 0.48 KEDOAH_17435 leuB 3-isopropylmalate dehydrogenase — —
Enterobacter asburiae PDN3 0.37 EX28DRAFT_1856 flagellar hook-basal body protein 0.49 EX28DRAFT_3669 3-isopropylmalate dehydrogenase low > 76
Escherichia coli ECRC100 0.37 OKFHMN_03660 flgE flagellar hook protein FlgE 0.48 OKFHMN_10720 leuB 3-isopropylmalate dehydrogenase low > 80
Escherichia coli ECRC102 0.37 NIAGMN_24170 flgE flagellar hook protein FlgE 0.48 NIAGMN_08570 leuB 3-isopropylmalate dehydrogenase — —
Escherichia coli ECOR27 0.37 NOLOHH_21190 flgE flagellar hook protein FlgE 0.48 NOLOHH_03065 leuA 2-isopropylmalate synthase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF3357 Flagellar hook protein FlgE 0.49 GFF165 3-isopropylmalate dehydrogenase (EC 1.1.1.85) low > 78
Pectobacterium carotovorum WPP14 0.36 HER17_RS08180 flagellar hook protein FlgE 0.47 HER17_RS03080 3-isopropylmalate dehydrogenase low > 75
Serratia liquefaciens MT49 0.36 IAI46_15945 flagellar hook protein FlgE 0.49 IAI46_03350 3-isopropylmalate dehydrogenase low > 86
Escherichia coli ECOR38 0.36 HEPCGN_23830 flgE flagellar hook protein FlgE 0.48 HEPCGN_08700 leuB 3-isopropylmalate dehydrogenase low > 87
Dickeya dianthicola 67-19 0.36 HGI48_RS13510 flagellar hook protein FlgE 0.48 HGI48_RS18060 3-isopropylmalate dehydrogenase low > 71
Erwinia tracheiphila SCR3 0.36 LU632_RS10410 flgE flagellar hook protein FlgE 0.45 LU632_RS02875 leuB 3-isopropylmalate dehydrogenase low > 74
Pseudomonas putida KT2440 0.34 PP_4388 Flagellar hook protein FlgE 0.64 PP_1988 3-isopropylmalate dehydrogenase low > 96
Cupriavidus basilensis FW507-4G11 0.34 RR42_RS35710 flagellar hook protein FlgE 0.91 RR42_RS14385 3-isopropylmalate dehydrogenase low > 128
Rahnella sp. WP5 0.34 EX31_RS11300 flagellar hook protein FlgE 0.47 EX31_RS03685 3-isopropylmalate dehydrogenase low > 89
Pseudomonas fluorescens FW300-N1B4 0.33 Pf1N1B4_3475 Flagellar hook protein FlgE 0.64 Pf1N1B4_12 3-isopropylmalate dehydrogenase (EC 1.1.1.85) low > 87
Shewanella loihica PV-4 0.32 Shew_1348 flgE flagellar hook protein FlgE (RefSeq) 0.46 Shew_3471 3-isopropylmalate dehydrogenase (RefSeq) low > 60
Castellaniella sp019104865 MT123 0.32 ABCV34_RS05755 flagellar hook protein FlgE 0.76 ABCV34_RS04280 3-isopropylmalate dehydrogenase low > 48
Shewanella sp. ANA-3 0.31 Shewana3_1324 flgE flagellar hook protein FlgE (RefSeq) 0.45 Shewana3_3760 3-isopropylmalate dehydrogenase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.31 SO3247 flgE flagellar hook protein FlgE (NCBI ptt file) 0.46 SO4235 leuB 3-isopropylmalate dehydrogenase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.30 Sama_2315 flgE flagellar hook protein FlgE (RefSeq) 0.45 Sama_0336 3-isopropylmalate dehydrogenase (RefSeq) low > 62
Dyella japonica UNC79MFTsu3.2 0.30 ABZR86_RS20090 flagellar hook protein FlgE 0.37 ABZR86_RS15950 3-isopropylmalate dehydrogenase low > 74
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS13420 flagellar hook protein FlgE 0.38 LRK54_RS10325 3-isopropylmalate dehydrogenase low > 59
Rhodanobacter denitrificans MT42 0.29 LRK55_RS13160 flagellar hook protein FlgE 0.38 LRK55_RS09965 3-isopropylmalate dehydrogenase low > 63
Sphingomonas koreensis DSMZ 15582 0.28 Ga0059261_2092 flagellar hook-basal body protein 0.61 Ga0059261_3190 3-isopropylmalate dehydrogenase low > 68
Alteromonas macleodii MIT1002 0.28 MIT1002_01042 Flagellar hook protein FlgE 0.48 MIT1002_00948 3-isopropylmalate dehydrogenase low > 70
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_02665 flgE flagellar hook protein FlgE 0.39 OKGIIK_13595 leuB 3-isopropylmalate dehydrogenase low > 52
Pseudomonas stutzeri RCH2 0.27 Psest_4150 fagellar hook-basal body proteins 0.63 Psest_2589 3-isopropylmalate dehydrogenase low > 67
Vibrio cholerae E7946 ATCC 55056 0.26 CSW01_11210 flagellar hook protein FlgE 0.48 CSW01_12600 3-isopropylmalate dehydrogenase low > 62
Paraburkholderia bryophila 376MFSha3.1 0.20 H281DRAFT_05765 flagellar hook protein FlgE 0.86 H281DRAFT_06072 3-isopropylmalate dehydrogenase low > 103
Rhodopseudomonas palustris CGA009 0.19 TX73_003345 flagellar hook protein FlgE 0.48 TX73_001175 3-isopropylmalate dehydrogenase — —
Rhizobium sp. OAE497 0.18 ABIE40_RS23030 flagellar hook protein FlgE 0.51 ABIE40_RS19050 3-isopropylmalate dehydrogenase low > 107
Desulfovibrio vulgaris Hildenborough JW710 0.18 DVU0307 flagella basal body rod domain protein (TIGR) 0.53 DVU2985 leuB 3-isopropylmalate dehydrogenase (TIGR) low > 55
Bosea sp. OAE506 0.18 ABIE41_RS05505 flagellar hook protein FlgE 0.51 ABIE41_RS11860 3-isopropylmalate dehydrogenase — —
Agrobacterium fabrum C58 0.17 Atu0574 flagellar hook protein 0.49 Atu2791 3-isopropylmalate dehydrogenase low > 89
Phaeobacter inhibens DSM 17395 0.17 PGA1_c35570 flagellar hook protein FlgE 0.54 PGA1_c29830 3-isopropylmalate dehydrogenase LeuB low > 62
Sinorhizobium meliloti 1021 0.16 SMc03047 flagellar hook protein FlgE 0.50 SMc04405 3-isopropylmalate dehydrogenase low > 103
Rhodospirillum rubrum S1H 0.12 Rru_A2532 flgE flagellar hook protein FlgE (RefSeq) 0.52 Rru_A1191 3-isopropylmalate dehydrogenase (NCBI) low > 58

Not shown: 0 genomes with orthologs for HSERO_RS17660 only; 44 genomes with orthologs for HSERO_RS16500 only