Conservation of cofitness between HSERO_RS21535 and HSERO_RS06245 in Herbaspirillum seropedicae SmR1

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS21535 NADH dehydrogenase 1.0 HSERO_RS06245 catalase-peroxidase 0.54 1
Burkholderia phytofirmans PsJN 0.74 BPHYT_RS26840 NADH dehydrogenase 0.75 BPHYT_RS10310 catalase-peroxidase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.74 H281DRAFT_02889 alkyl hydroperoxide reductase subunit F 0.70 H281DRAFT_00053 catalase-peroxidase — —
Paraburkholderia sabiae LMG 24235 0.74 QEN71_RS13375 alkyl hydroperoxide reductase subunit F 0.75 QEN71_RS29740 catalase/peroxidase HPI low > 153
Ralstonia sp. UNC404CL21Col 0.72 ABZR87_RS17240 alkyl hydroperoxide reductase subunit F 0.65 ABZR87_RS01240 catalase/peroxidase HPI 0.80 1
Pseudomonas fluorescens FW300-N2C3 0.72 AO356_22810 alkyl hydroperoxide reductase subunit F 0.72 AO356_07735 hydroperoxidase low > 104
Pseudomonas fluorescens FW300-N2E2 0.72 Pf6N2E2_448 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.72 Pf6N2E2_3430 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 103
Pseudomonas fluorescens FW300-N2E3 0.71 AO353_26960 alkyl hydroperoxide reductase subunit F 0.70 AO353_23210 hydroperoxidase low > 101
Ralstonia solanacearum IBSBF1503 0.71 RALBFv3_RS22265 alkyl hydroperoxide reductase subunit F 0.73 RALBFv3_RS13105 catalase/peroxidase HPI low > 76
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_5010 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.70 Pf1N1B4_4230 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 87
Ralstonia solanacearum UW163 0.71 UW163_RS22810 alkyl hydroperoxide reductase subunit F 0.73 UW163_RS00460 catalase/peroxidase HPI — —
Pseudomonas stutzeri RCH2 0.71 Psest_1134 alkyl hydroperoxide reductase, F subunit 0.62 Psest_2741 catalase/peroxidase HPI low > 67
Azospirillum sp. SherDot2 0.71 MPMX19_05836 Alkyl hydroperoxide reductase subunit F 0.64 MPMX19_03084 Catalase-peroxidase low > 112
Ralstonia solanacearum PSI07 0.70 RPSI07_RS00935 alkyl hydroperoxide reductase subunit F 0.72 RPSI07_RS20110 catalase/peroxidase HPI low > 81
Pseudomonas putida KT2440 0.70 PP_2440 Alkyl hydroperoxide reductase subunit F 0.72 PP_3668 Catalase-peroxidase low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.69 Psyr_2974 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 0.72 Psyr_4208 heme catalase/peroxidase 0.31 71
Pseudomonas syringae pv. syringae B728a 0.69 Psyr_2974 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 0.72 Psyr_4208 heme catalase/peroxidase low > 86
Dyella japonica UNC79MFTsu3.2 0.69 ABZR86_RS08495 alkyl hydroperoxide reductase subunit F 0.70 ABZR86_RS00615 catalase/peroxidase HPI low > 74
Lysobacter sp. OAE881 0.69 ABIE51_RS05480 alkyl hydroperoxide reductase subunit F 0.69 ABIE51_RS07780 catalase/peroxidase HPI low > 62
Pseudomonas sp. S08-1 0.68 OH686_18675 alkyl hydroperoxide reductase subunit F 0.64 OH686_15490 catalase/peroxidase HPI low > 80
Variovorax sp. SCN45 0.67 GFF2825 Alkyl hydroperoxide reductase protein F 0.73 GFF4692 Catalase-peroxidase KatG (EC 1.11.1.21) low > 127
Dechlorosoma suillum PS 0.67 Dsui_1902 alkyl hydroperoxide reductase, F subunit 0.56 Dsui_2233 catalase/peroxidase HPI low > 51
Xanthomonas campestris pv. campestris strain 8004 0.67 Xcc-8004.4222.1 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.71 Xcc-8004.3762.1 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 74
Acidovorax sp. GW101-3H11 0.66 Ac3H11_232 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.69 Ac3H11_135 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) 0.29 36
Brevundimonas sp. GW460-12-10-14-LB2 0.65 A4249_RS04545 alkyl hydroperoxide reductase subunit F 0.72 A4249_RS12750 catalase/peroxidase HPI low > 48
Hydrogenophaga sp. GW460-11-11-14-LB1 0.65 GFF3915 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.63 GFF637 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 90
Caulobacter crescentus NA1000 Δfur 0.65 CCNA_03013 alkyl hydroperoxide reductase subunit F 0.63 CCNA_03138 peroxidase/catalase katG low > 67
Caulobacter crescentus NA1000 0.65 CCNA_03013 alkyl hydroperoxide reductase subunit F 0.63 CCNA_03138 peroxidase/catalase katG low > 66
Marinobacter adhaerens HP15 0.64 HP15_3619 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 0.55 HP15_1397 peroxidase/catalase HPI low > 73
Sphingomonas koreensis DSMZ 15582 0.63 Ga0059261_0156 alkyl hydroperoxide reductase subunit F 0.54 Ga0059261_3628 catalase/peroxidase HPI low > 68
Shewanella sp. ANA-3 0.62 Shewana3_3326 FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq) 0.58 Shewana3_0306 catalase/peroxidase HPI (RefSeq) low > 73
Shewanella oneidensis MR-1 0.62 SO0956 ahpF alkyl hydroperoxide reductase, F subunit (NCBI ptt file) 0.60 SO4405 katG-2 catalase/peroxidase HPI (NCBI ptt file) low > 76
Klebsiella michiganensis M5al 0.62 BWI76_RS07945 alkyl hydroperoxide reductase subunit F 0.60 BWI76_RS13925 catalase/peroxidase HPI low > 92
Shewanella amazonensis SB2B 0.61 Sama_0618 alkyl hydroperoxide reductase, F subunit (RefSeq) 0.58 Sama_0745 catalase (RefSeq) low > 62
Enterobacter asburiae PDN3 0.60 EX28DRAFT_2349 alkyl hydroperoxide reductase subunit F 0.61 EX28DRAFT_4414 catalase/peroxidase HPI low > 76
Shewanella loihica PV-4 0.60 Shew_0793 FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq) 0.52 Shew_0709 catalase/peroxidase HPI (RefSeq) low > 60
Escherichia coli ECRC101 0.60 MCAODC_26720 Alkyl hydroperoxide reductase subunit F 0.60 MCAODC_04160 katG catalase/peroxidase HPI low > 87
Escherichia coli ECRC100 0.60 OKFHMN_07505 Alkyl hydroperoxide reductase subunit F 0.60 OKFHMN_13660 katG catalase/peroxidase HPI low > 80
Pectobacterium carotovorum WPP14 0.60 HER17_RS02550 alkyl hydroperoxide reductase subunit F 0.56 HER17_RS09165 catalase/peroxidase HPI low > 75
Escherichia coli ECRC98 0.60 JDDGAC_11150 Alkyl hydroperoxide reductase subunit F 0.60 JDDGAC_17285 katG catalase/peroxidase HPI low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_03099 Alkyl hydroperoxide reductase subunit F 0.60 OHPLBJKB_04108 Catalase-peroxidase low > 73
Escherichia coli ECOR38 0.60 HEPCGN_00775 Alkyl hydroperoxide reductase subunit F 0.60 HEPCGN_12305 katG catalase/peroxidase HPI low > 87
Escherichia coli ECRC99 0.60 KEDOAH_20465 Alkyl hydroperoxide reductase subunit F 0.60 KEDOAH_14500 katG catalase/peroxidase HPI — —
Escherichia fergusonii Becca 0.60 EFB2_03485 Alkyl hydroperoxide reductase subunit F 0.60 EFB2_04671 Catalase-peroxidase low > 86
Escherichia coli ECOR27 0.60 NOLOHH_23880 Alkyl hydroperoxide reductase subunit F 0.60 NOLOHH_05805 katG catalase/peroxidase HPI low > 75
Escherichia coli ECRC102 0.60 NIAGMN_05560 Alkyl hydroperoxide reductase subunit F 0.60 NIAGMN_11415 katG catalase/peroxidase HPI — —
Escherichia coli ECRC62 0.60 BNILDI_21890 Alkyl hydroperoxide reductase subunit F 0.60 BNILDI_05730 katG catalase/peroxidase HPI 0.50 55
Escherichia coli BL21 0.60 ECD_00575 alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)-binding 0.60 ECD_03828 catalase-peroxidase HPI, heme b-containing 0.61 15
Escherichia coli BW25113 0.60 b0606 ahpF alkyl hydroperoxide reductase, F52a subunit; detoxification of hydroperoxides (VIMSS) 0.60 b3942 katG catalase/hydroperoxidase HPI(I) (NCBI) low > 76
Escherichia coli Nissle 1917 0.60 ECOLIN_RS03325 alkyl hydroperoxide reductase subunit F 0.60 ECOLIN_RS22765 catalase/peroxidase HPI low > 55
Pantoea sp. MT58 0.60 IAI47_06795 alkyl hydroperoxide reductase subunit F 0.58 IAI47_07215 catalase/peroxidase HPI low > 76
Enterobacter sp. TBS_079 0.60 MPMX20_01272 Alkyl hydroperoxide reductase subunit F 0.61 MPMX20_04528 Catalase-peroxidase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF4514 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.61 GFF2330 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 78
Dickeya dianthicola ME23 0.59 DZA65_RS02570 alkyl hydroperoxide reductase subunit F 0.70 DZA65_RS08685 catalase/peroxidase HPI low > 75
Dickeya dianthicola 67-19 0.59 HGI48_RS02465 alkyl hydroperoxide reductase subunit F 0.70 HGI48_RS08090 catalase/peroxidase HPI low > 71
Dickeya dadantii 3937 0.59 DDA3937_RS02520 alkyl hydroperoxide reductase subunit F 0.70 DDA3937_RS07265 catalase/peroxidase HPI low > 74
Alteromonas macleodii MIT1002 0.46 MIT1002_01785 NADH dehydrogenase 0.52 MIT1002_03345 Catalase-peroxidase 2 precursor low > 70
Kangiella aquimarina DSM 16071 0.43 B158DRAFT_0279 alkyl hydroperoxide reductase, F subunit 0.58 B158DRAFT_0261 catalase/peroxidase HPI low > 40

Not shown: 20 genomes with orthologs for HSERO_RS21535 only; 17 genomes with orthologs for HSERO_RS06245 only