| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Herbaspirillum seropedicae SmR1 | 1.0 | HSERO_RS05945 | | hypothetical protein | 1.0 | HSERO_RS06055 | | nitrate transporter | 0.29 | 2 |
| Ralstonia solanacearum PSI07 | 0.55 | RPSI07_RS12675 | | JAB domain-containing protein | 0.75 | RPSI07_RS22270 | | nitrate ABC transporter substrate-binding protein | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.55 | RS_RS12270 | | JAB domain-containing protein | 0.74 | RS_RS01875 | | nitrate ABC transporter substrate-binding protein | low | > 80 |
| Ralstonia sp. UNC404CL21Col | 0.55 | ABZR87_RS00330 | | DNA repair protein RadC | 0.75 | ABZR87_RS06900 | | CmpA/NrtA family ABC transporter substrate-binding protein | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.54 | RALBFv3_RS04710 | | JAB domain-containing protein | 0.75 | RALBFv3_RS11035 | | nitrate ABC transporter substrate-binding protein | low | > 76 |
| Ralstonia solanacearum UW163 | 0.54 | UW163_RS08960 | | JAB domain-containing protein | 0.75 | UW163_RS02545 | | nitrate ABC transporter substrate-binding protein | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.53 | RR42_RS16995 | | hypothetical protein | 0.74 | RR42_RS01955 | | nitrate transporter | 0.27 | 81 |
| Dechlorosoma suillum PS | 0.53 | Dsui_1537 | | DNA repair protein radc | 0.70 | Dsui_1831 | | ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component | 0.81 | 38 |
| Pseudomonas sp. RS175 | 0.49 | PFR28_04412 | | hypothetical protein | 0.53 | PFR28_01053 | | Nitrate/nitrite binding protein NrtA | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.48 | Pf1N1B4_2126 | | DNA repair protein RadC | 0.63 | Pf1N1B4_5096 | | Nitrate ABC transporter, nitrate-binding protein | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.48 | AO353_09220 | | hypothetical protein | 0.52 | AO353_00785 | | nitrate transporter | low | > 101 |
| Paraburkholderia graminis OAS925 | 0.48 | ABIE53_003289 | | DNA repair protein RadC | 0.40 | ABIE53_005718 | | ABC-type nitrate/sulfonate/bicarbonate transport system substrate-binding protein | low | > 113 |
| Pseudomonas stutzeri RCH2 | 0.47 | Psest_3803 | | DNA repair protein radc | 0.54 | Psest_1937 | | ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components | low | > 67 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.47 | H281DRAFT_04066 | | DNA replication and repair protein RadC | 0.40 | H281DRAFT_01219 | | nitrate/nitrite transport system substrate-binding protein | low | > 103 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.47 | GFF1170 | | DNA repair protein RadC | 0.77 | GFF3671 | | Nitrate ABC transporter, nitrate-binding protein | low | > 90 |
| Pseudomonas fluorescens FW300-N2C3 | 0.47 | AO356_12545 | | hypothetical protein | 0.53 | AO356_02750 | | nitrate transporter | low | > 104 |
| Paraburkholderia sabiae LMG 24235 | 0.46 | QEN71_RS03085 | | DNA repair protein RadC | 0.39 | QEN71_RS12555 | | CmpA/NrtA family ABC transporter substrate-binding protein | low | > 153 |
| Pseudomonas fluorescens SBW25 | 0.46 | PFLU_RS29445 | | JAB domain-containing protein | 0.53 | PFLU_RS22570 | | ABC transporter substrate-binding protein | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.46 | PFLU_RS29445 | | JAB domain-containing protein | 0.53 | PFLU_RS22570 | | ABC transporter substrate-binding protein | low | > 109 |
| Burkholderia phytofirmans PsJN | 0.45 | BPHYT_RS15625 | | hypothetical protein | 0.40 | BPHYT_RS28170 | | nitrate ABC transporter substrate-binding protein | low | > 109 |
| Pseudomonas simiae WCS417 | 0.45 | PS417_27770 | | hypothetical protein | 0.54 | PS417_20960 | | Nitrate-binding regulatory protein (nasS) (from data) | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.45 | Pf6N2E2_4377 | | DNA repair protein RadC | 0.54 | Pf6N2E2_2374 | | Nitrate ABC transporter, nitrate-binding protein | low | > 103 |
| Pseudomonas fluorescens GW456-L13 | 0.44 | PfGW456L13_798 | | DNA repair protein RadC | 0.54 | PfGW456L13_4097 | | Nitrate ABC transporter, nitrate-binding protein | low | > 87 |
| Pseudomonas putida KT2440 | 0.43 | PP_5284 | | UPF0758 protein PP_5284 | 0.52 | PP_2094 | | putative Nitrate-binding protein NasS | low | > 96 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.43 | Xcc-8004.4897.1 | | DNA repair protein RadC | 0.36 | Xcc-8004.2714.1 | | Nitrate ABC transporter, nitrate-binding protein | low | > 74 |
| Marinobacter adhaerens HP15 | 0.43 | HP15_3321 | | DNA repair protein RadC-like protein | 0.26 | HP15_1012 | | nitrate transporter component, NrtA | 0.36 | 35 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.42 | Psyr_0222 | | DNA replication and repair protein RadC | 0.53 | Psyr_2105 | | conserved hypothetical protein | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.42 | Psyr_0222 | | DNA replication and repair protein RadC | 0.53 | Psyr_2105 | | conserved hypothetical protein | low | > 86 |
| Pseudomonas sp. S08-1 | 0.42 | OH686_13620 | | UPF0758 family protein | 0.62 | OH686_04015 | | Nitrate ABC transporter, substrate-binding protein | low | > 80 |
| Alteromonas macleodii MIT1002 | 0.41 | MIT1002_00049 | | DNA repair protein RadC | 0.26 | MIT1002_00709 | | Nitrate transport protein NrtA precursor | low | > 70 |
| Variovorax sp. SCN45 | 0.41 | GFF5700 | | UPF0758 family protein | 0.76 | GFF4737 | | Nitrate ABC transporter, substrate-binding protein | low | > 127 |
| Variovorax sp. OAS795 | 0.40 | ABID97_RS07700 | | DNA repair protein RadC | 0.76 | ABID97_RS20560 | | CmpA/NrtA family ABC transporter substrate-binding protein | low | > 91 |
| Dickeya dianthicola 67-19 | 0.40 | HGI48_RS00700 | | DNA repair protein RadC | 0.61 | HGI48_RS14105 | | ABC transporter substrate-binding protein | low | > 71 |
| Pectobacterium carotovorum WPP14 | 0.40 | HER17_RS20830 | | DNA repair protein RadC | 0.61 | HER17_RS07315 | | ABC transporter substrate-binding protein | low | > 75 |
| Dickeya dianthicola ME23 | 0.40 | DZA65_RS00755 | | JAB domain-containing protein | 0.61 | DZA65_RS14765 | | ABC transporter substrate-binding protein | low | > 75 |
| Acidovorax sp. GW101-3H11 | 0.40 | Ac3H11_1774 | | DNA repair protein RadC | 0.76 | Ac3H11_3220 | | Nitrate ABC transporter, nitrate-binding protein | low | > 79 |
| Dickeya dadantii 3937 | 0.40 | DDA3937_RS20515 | | DNA repair protein RadC | 0.61 | DDA3937_RS14105 | | ABC transporter substrate-binding protein | low | > 74 |
| Rahnella sp. WP5 | 0.39 | EX31_RS14470 | | JAB domain-containing protein | 0.59 | EX31_RS09125 | | ABC transporter substrate-binding protein | low | > 89 |
| Pantoea sp. MT58 | 0.39 | IAI47_00620 | | DNA repair protein RadC | 0.61 | IAI47_11185 | | ABC transporter substrate-binding protein | low | > 76 |
| Klebsiella michiganensis M5al | 0.38 | BWI76_RS27365 | | hypothetical protein | 0.59 | BWI76_RS17380 | | nitrate transporter component | low | > 92 |
| Enterobacter sp. TBS_079 | 0.38 | MPMX20_00097 | | hypothetical protein | 0.55 | MPMX20_02624 | | Nitrate/nitrite binding protein NrtA | low | > 85 |
| Enterobacter asburiae PDN3 | 0.38 | EX28DRAFT_3888 | | DNA repair protein radc | 0.55 | EX28DRAFT_0842 | | ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components | low | > 76 |
| Dinoroseobacter shibae DFL-12 | 0.30 | Dshi_3569 | | DNA repair protein RadC (RefSeq) | 0.25 | Dshi_1663 | | nitrate transporter substrate-binding (RefSeq) | low | > 64 |
| Bosea sp. OAE506 | 0.29 | ABIE41_RS13815 | | DNA repair protein RadC | 0.30 | ABIE41_RS21330 | | CmpA/NrtA family ABC transporter substrate-binding protein | low | > 77 |
| Rhodopseudomonas palustris CGA009 | 0.28 | TX73_002000 | | DNA repair protein RadC | 0.28 | TX73_010885 | | CmpA/NrtA family ABC transporter substrate-binding protein | low | > 86 |
| Azospirillum brasilense Sp245 | 0.26 | AZOBR_RS04400 | | DNA repair protein RadC | 0.24 | AZOBR_RS18560 | | ABC transporter for nitrate, periplasmic substrate-binding component (from data) | low | > 97 |
| Synechococcus elongatus PCC 7942 | 0.23 | Synpcc7942_1227 | radC | DNA repair protein RadC | 0.29 | Synpcc7942_1239 | nrtA | ABC-type nitrate/nitrite transport system substrate-binding protein | — | — |
Not shown: 45 genomes with orthologs for HSERO_RS05945 only; 8 genomes with orthologs for HSERO_RS06055 only