| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Dickeya dianthicola 67-19 | 1.0 | HGI48_RS18515 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 1.0 | HGI48_RS17875 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.68 | 10 |
| Dickeya dianthicola ME23 | 0.99 | DZA65_RS19650 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 1.00 | DZA65_RS19020 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 75 |
| Dickeya dadantii 3937 | 0.97 | DDA3937_RS18580 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.95 | DDA3937_RS17945 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.61 | 2 |
| Pectobacterium carotovorum WPP14 | 0.88 | HER17_RS02615 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.73 | HER17_RS03260 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 75 |
| Serratia liquefaciens MT49 | 0.85 | IAI46_01800 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.67 | IAI46_03535 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.59 | 6 |
| Klebsiella michiganensis M5al | 0.84 | BWI76_RS02820 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.68 | BWI76_RS04850 | | N-acetylmuramoyl-L-alanine amidase | 0.42 | 1 |
| Enterobacter sp. TBS_079 | 0.83 | MPMX20_00515 | | UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase | 0.68 | MPMX20_00801 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 85 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.83 | GFF881 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) | 0.66 | GFF129 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD | low | > 78 |
| Escherichia coli ECRC98 | 0.83 | JDDGAC_15580 | mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase | 0.67 | JDDGAC_14120 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.91 | 45 |
| Escherichia coli ECRC62 | 0.83 | BNILDI_07315 | mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase | 0.67 | BNILDI_08740 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.90 | 34 |
| Escherichia coli ECRC99 | 0.83 | KEDOAH_16215 | mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase | 0.67 | KEDOAH_17630 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | — | — |
| Escherichia coli BL21 | 0.83 | ECD_04101 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.67 | ECD_00109 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase, Zn-dependent; murein amidase | low | > 61 |
| Escherichia coli ECOR38 | 0.83 | HEPCGN_10140 | mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase | 0.67 | HEPCGN_08505 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.89 | 9 |
| Escherichia coli ECRC101 | 0.83 | MCAODC_02445 | mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase | 0.67 | MCAODC_01040 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.55 | 80 |
| Escherichia fergusonii Becca | 0.83 | EFB2_04300 | | UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase | 0.67 | EFB2_03939 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 86 |
| Escherichia coli ECRC100 | 0.83 | OKFHMN_11940 | mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase | 0.67 | OKFHMN_10525 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.83 | 25 |
| Escherichia coli ECOR27 | 0.83 | NOLOHH_04200 | mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase | 0.67 | NOLOHH_02870 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.87 | 23 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.83 | OHPLBJKB_03802 | | UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase | 0.67 | OHPLBJKB_03551 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 73 |
| Escherichia coli ECRC102 | 0.83 | NIAGMN_09790 | mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase | 0.67 | NIAGMN_08375 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | — | — |
| Escherichia coli Nissle 1917 | 0.83 | ECOLIN_RS24560 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.67 | ECOLIN_RS00590 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.85 | 1 |
| Enterobacter asburiae PDN3 | 0.83 | EX28DRAFT_3420 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase | 0.68 | EX28DRAFT_3703 | | N-acetylmuramoyl-L-alanine amidase | — | — |
| Escherichia coli BW25113 | 0.83 | b4233 | mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (NCBI) | 0.67 | b0110 | ampD | N-acetyl-anhydromuranmyl-L-alanine amidase (NCBI) | 0.35 | 7 |
| Rahnella sp. WP5 | 0.82 | EX31_RS08665 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.68 | EX31_RS03510 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 89 |
| Pantoea sp. MT58 | 0.80 | IAI47_02755 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.65 | IAI47_15840 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.34 | 56 |
| Vibrio cholerae E7946 ATCC 55056 | 0.67 | CSW01_12875 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.55 | CSW01_12260 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.78 | 1 |
| Shewanella sp. ANA-3 | 0.61 | Shewana3_0791 | | UDP-N-acetylmuramate (RefSeq) | 0.54 | Shewana3_0423 | | N-acetyl-anhydromuranmyl-L-alanine amidase (RefSeq) | 0.79 | 1 |
| Shewanella oneidensis MR-1 | 0.61 | SO3805 | mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (NCBI ptt file) | 0.56 | SO0421 | ampD | AmpD protein (NCBI ptt file) | low | > 76 |
| Shewanella loihica PV-4 | 0.60 | Shew_3144 | | UDP-N-acetylmuramate (RefSeq) | 0.54 | Shew_3434 | | N-acetyl-anhydromuranmyl-L-alanine amidase (RefSeq) | 0.80 | 1 |
| Shewanella amazonensis SB2B | 0.59 | Sama_0769 | | UDP-N-acetylmuramate (RefSeq) | 0.56 | Sama_0372 | | N-acetyl-anhydromuranmyl-L-alanine amidase (RefSeq) | 0.75 | 1 |
| Alteromonas macleodii MIT1002 | 0.59 | MIT1002_00168 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.56 | MIT1002_03006 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 70 |
| Pseudomonas simiae WCS417 | 0.58 | PS417_24800 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.54 | PS417_03935 | | N-acetyl-anhydromuranmyl-L-alanine amidase | 0.36 | 40 |
| Ralstonia solanacearum PSI07 | 0.57 | RPSI07_RS11275 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.51 | RPSI07_RS11160 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | — | — |
| Ralstonia solanacearum GMI1000 | 0.57 | RS_RS13915 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.50 | RS_RS14030 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | — | — |
| Pseudomonas fluorescens SBW25 | 0.57 | PFLU_RS26735 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.55 | PFLU_RS03980 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.93 | 2 |
| Ralstonia solanacearum UW163 | 0.57 | UW163_RS07655 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.50 | UW163_RS07545 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | — | — |
| Pseudomonas putida KT2440 | 0.57 | PP_0547 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.51 | PP_0789 | | N-acetyl-anhydromuramyl-L-alanine-amidase | low | > 96 |
| Ralstonia solanacearum IBSBF1503 | 0.57 | RALBFv3_RS05970 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.50 | RALBFv3_RS06080 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.57 | PFLU_RS26735 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.55 | PFLU_RS03980 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.41 | 20 |
| Pseudomonas fluorescens FW300-N2C3 | 0.57 | AO356_15235 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.55 | AO356_07360 | | N-acetyl-anhydromuranmyl-L-alanine amidase | 0.41 | 7 |
| Pseudomonas fluorescens FW300-N2E3 | 0.57 | AO353_06550 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.54 | AO353_05510 | | N-acetyl-anhydromuranmyl-L-alanine amidase | low | > 101 |
| Pseudomonas sp. RS175 | 0.57 | PFR28_03883 | | UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase | 0.56 | PFR28_00100 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.72 | 2 |
| Pseudomonas syringae pv. syringae B728a | 0.56 | Psyr_0630 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.53 | Psyr_0817 | | N-acetylmuramoyl-L-alanine amidase, family 2 | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.56 | Psyr_0630 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.53 | Psyr_0817 | | N-acetylmuramoyl-L-alanine amidase, family 2 | low | > 86 |
| Pseudomonas fluorescens GW456-L13 | 0.56 | PfGW456L13_1344 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) | 0.53 | PfGW456L13_5081 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD | — | — |
| Ralstonia sp. UNC404CL21Col | 0.56 | ABZR87_RS01630 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.50 | ABZR87_RS01745 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.50 | 1 |
| Pseudomonas fluorescens FW300-N1B4 | 0.56 | Pf1N1B4_2676 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) | 0.55 | Pf1N1B4_1151 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.56 | Pf6N2E2_4982 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) | 0.55 | Pf6N2E2_3344 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD | low | > 103 |
| Paraburkholderia sabiae LMG 24235 | 0.56 | QEN71_RS27145 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.52 | QEN71_RS27225 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 153 |
| Herbaspirillum seropedicae SmR1 | 0.55 | HSERO_RS01965 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.56 | HSERO_RS01880 | | N-acetyl-anhydromuranmyl-L-alanine amidase | 0.46 | 53 |
| Pseudomonas stutzeri RCH2 | 0.55 | Psest_0673 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase | 0.53 | Psest_0725 | | Negative regulator of beta-lactamase expression | low | > 67 |
| Burkholderia phytofirmans PsJN | 0.54 | BPHYT_RS16990 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.52 | BPHYT_RS17065 | | N-acetyl-anhydromuranmyl-L-alanine amidase | — | — |
| Paraburkholderia graminis OAS925 | 0.54 | ABIE53_003563 | | UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase | 0.52 | ABIE53_003579 | | AmpD protein | 0.68 | 1 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.54 | H281DRAFT_06288 | | UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase | 0.52 | H281DRAFT_06273 | | AmpD protein | low | > 103 |
| Dechlorosoma suillum PS | 0.54 | Dsui_0384 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.54 | Dsui_0134 | | negative regulator of beta-lactamase expression | low | > 51 |
| Pseudomonas sp. S08-1 | 0.54 | OH686_09400 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.54 | OH686_16530 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase | low | > 80 |
| Kangiella aquimarina DSM 16071 | 0.52 | B158DRAFT_2035 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase | 0.58 | B158DRAFT_2134 | | Negative regulator of beta-lactamase expression | 0.87 | 2 |
| Marinobacter adhaerens HP15 | 0.51 | HP15_616 | | UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase | 0.51 | HP15_1307 | | N-acetyl-anhydromuranmyl-L-alanine amidase | — | — |
| Acinetobacter radioresistens SK82 | 0.50 | MPMX26_03053 | | UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase | 0.49 | MPMX26_00043 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.81 | 7 |
| Castellaniella sp019104865 MT123 | 0.50 | ABCV34_RS10690 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.50 | ABCV34_RS09025 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 48 |
| Variovorax sp. SCN45 | 0.50 | GFF4445 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase (EC 6.3.2.-) | 0.44 | GFF4433 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase | low | > 127 |
| Variovorax sp. OAS795 | 0.48 | ABID97_RS06355 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.43 | ABID97_RS06410 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.47 | GFF583 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) | 0.43 | GFF594 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD | — | — |
Not shown: 13 genomes with orthologs for HGI48_RS18515 only; 0 genomes with orthologs for HGI48_RS17875 only