Conservation of cofitness between HGI48_RS06620 and HGI48_RS10910 in Dickeya dianthicola 67-19

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola 67-19 1.0 HGI48_RS06620 galactose-1-epimerase 1.0 HGI48_RS10910 Re/Si-specific NAD(P)(+) transhydrogenase subunit beta 0.65 13
Dickeya dianthicola ME23 0.98 DZA65_RS06975 galactose-1-epimerase 1.00 DZA65_RS11370 Re/Si-specific NAD(P)(+) transhydrogenase subunit beta low > 75
Dickeya dadantii 3937 0.91 DDA3937_RS06600 galactose-1-epimerase 0.95 DDA3937_RS10960 Re/Si-specific NAD(P)(+) transhydrogenase subunit beta low > 74
Pectobacterium carotovorum WPP14 0.67 HER17_RS14770 galactose-1-epimerase 0.90 HER17_RS10515 Re/Si-specific NAD(P)(+) transhydrogenase subunit beta low > 75
Serratia liquefaciens MT49 0.63 IAI46_06420 galactose-1-epimerase 0.85 IAI46_13270 Re/Si-specific NAD(P)(+) transhydrogenase subunit beta low > 86
Rahnella sp. WP5 0.58 EX31_RS23565 galactose-1-epimerase 0.89 EX31_RS07210 Re/Si-specific NAD(P)(+) transhydrogenase subunit beta low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF649 Aldose 1-epimerase (EC 5.1.3.3) 0.86 GFF1795 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) low > 78
Escherichia coli ECOR27 0.57 NOLOHH_23160 galM galactose-1-epimerase 0.88 NOLOHH_18200 pntB Re/Si-specific NAD(P)(+) transhydrogenase subunit beta low > 75
Escherichia coli ECOR38 0.57 HEPCGN_01545 galM galactose-1-epimerase 0.88 HEPCGN_06070 pntB Re/Si-specific NAD(P)(+) transhydrogenase subunit beta low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_02957 Aldose 1-epimerase 0.88 OHPLBJKB_02124 NAD(P) transhydrogenase subunit beta low > 73
Escherichia coli BW25113 0.57 b0756 galM galactose-1-epimerase (mutarotase) (NCBI) 0.88 b1602 pntB pyridine nucleotide transhydrogenase (NCBI) low > 76
Escherichia coli ECRC62 0.57 BNILDI_21155 galM galactose-1-epimerase 0.87 BNILDI_16990 pntB Re/Si-specific NAD(P)(+) transhydrogenase subunit beta low > 75
Escherichia fergusonii Becca 0.57 EFB2_03350 Aldose 1-epimerase 0.88 EFB2_02390 NAD(P) transhydrogenase subunit beta low > 86
Escherichia coli Nissle 1917 0.57 ECOLIN_RS04025 galactose-1-epimerase 0.88 ECOLIN_RS08950 Re/Si-specific NAD(P)(+) transhydrogenase subunit beta low > 55
Erwinia tracheiphila SCR3 0.57 LU632_RS15915 galM galactose-1-epimerase 0.83 LU632_RS11430 pntB Re/Si-specific NAD(P)(+) transhydrogenase subunit beta low > 74
Escherichia coli ECRC101 0.57 MCAODC_25950 galM galactose-1-epimerase 0.88 MCAODC_17715 pntB Re/Si-specific NAD(P)(+) transhydrogenase subunit beta low > 87
Escherichia coli ECRC99 0.57 KEDOAH_21235 galM galactose-1-epimerase 0.88 KEDOAH_00410 pntB Re/Si-specific NAD(P)(+) transhydrogenase subunit beta — —
Escherichia coli ECRC98 0.57 JDDGAC_10385 galM galactose-1-epimerase 0.88 JDDGAC_02285 pntB Re/Si-specific NAD(P)(+) transhydrogenase subunit beta low > 86
Escherichia coli ECRC102 0.57 NIAGMN_04780 galM galactose-1-epimerase 0.88 NIAGMN_00380 pntB Re/Si-specific NAD(P)(+) transhydrogenase subunit beta — —
Pantoea sp. MT58 0.57 IAI47_13595 galactose-1-epimerase 0.81 IAI47_09570 Re/Si-specific NAD(P)(+) transhydrogenase subunit beta low > 76
Escherichia coli ECRC100 0.57 OKFHMN_06730 galM galactose-1-epimerase 0.88 OKFHMN_27695 pntB Re/Si-specific NAD(P)(+) transhydrogenase subunit beta low > 80
Klebsiella michiganensis M5al 0.56 BWI76_RS08610 galactose-1-epimerase 0.86 BWI76_RS16200 NAD(P) transhydrogenase subunit beta low > 92
Enterobacter asburiae PDN3 0.56 EX28DRAFT_2239 galactose mutarotase 0.83 EX28DRAFT_1543 NAD/NADP transhydrogenase beta subunit low > 76
Enterobacter sp. TBS_079 0.56 MPMX20_01383 Aldose 1-epimerase 0.86 MPMX20_02032 NAD(P) transhydrogenase subunit beta low > 85
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_07995 galactose-1-epimerase 0.78 CSW01_17045 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta low > 62
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS25885 aldose epimerase family protein 0.47 QEN71_RS26720 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta low > 153
Shewanella oneidensis MR-1 0.28 SO0693 galM aldose 1-epimerase (NCBI ptt file) 0.82 SO3741 pntB NAD(P) transhydrogenase, beta subunit (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.28 Shewana3_3579 Aldose 1-epimerase (EC 5.1.3.3) (from data) 0.80 Shewana3_0853 pntB pyridine nucleotide transhydrogenase (RefSeq) low > 73
Dyella japonica UNC79MFTsu3.2 0.27 ABZR86_RS01235 aldose epimerase family protein 0.36 ABZR86_RS22120 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta low > 74
Caulobacter crescentus NA1000 Δfur 0.26 CCNA_01485 aldose 1-epimerase 0.46 CCNA_03412 NAD(P) transhydrogenase subunit beta PntB low > 67
Caulobacter crescentus NA1000 0.26 CCNA_01485 aldose 1-epimerase 0.46 CCNA_03412 NAD(P) transhydrogenase subunit beta PntB low > 66
Ralstonia sp. UNC404CL21Col 0.26 ABZR87_RS18210 aldose epimerase family protein 0.48 ABZR87_RS01355 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta low > 80
Rhodanobacter sp. FW510-T8 0.26 OKGIIK_12490 Aldose 1-epimerase 0.35 OKGIIK_10675 pntB NAD(P) transhydrogenase subunit beta low > 52
Paraburkholderia bryophila 376MFSha3.1 0.26 H281DRAFT_03874 aldose 1-epimerase (EC 5.1.3.3) 0.46 H281DRAFT_04655 NAD(P) transhydrogenase subunit beta low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_2369 aldose 1-epimerase 0.48 Psyr_5018 NAD(P) transhydrogenase, beta subunit low > 86
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_2369 aldose 1-epimerase 0.48 Psyr_5018 NAD(P) transhydrogenase, beta subunit low > 86
Herbaspirillum seropedicae SmR1 0.26 HSERO_RS22450 aldose 1-epimerase 0.44 HSERO_RS03495 NAD(P) transhydrogenase subunit beta low > 78
Lysobacter sp. OAE881 0.25 ABIE51_RS10905 aldose epimerase family protein 0.37 ABIE51_RS05560 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta low > 62
Pseudomonas fluorescens FW300-N1B4 0.25 Pf1N1B4_84 Aldose 1-epimerase (EC 5.1.3.3) 0.47 Pf1N1B4_1820 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) low > 87
Pseudomonas sp. RS175 0.25 PFR28_01305 Aldose 1-epimerase 0.47 PFR28_04723 NAD(P) transhydrogenase subunit beta low > 88
Shewanella amazonensis SB2B 0.25 Sama_0535 Aldose 1-epimerase (EC 5.1.3.3) (from data) 0.79 Sama_2841 pntB pyridine nucleotide transhydrogenase (RefSeq) low > 62
Burkholderia phytofirmans PsJN 0.25 BPHYT_RS32835 aldose 1-epimerase 0.46 BPHYT_RS03380 NAD(P) transhydrogenase subunit beta — —
Shewanella loihica PV-4 0.24 Shew_3272 Aldose 1-epimerase (EC 5.1.3.3) (from data) 0.44 Shew_0662 NAD(P) transhydrogenase, beta subunit (RefSeq) low > 60
Azospirillum sp. SherDot2 0.24 MPMX19_06214 Aldose 1-epimerase 0.51 MPMX19_01276 NAD(P) transhydrogenase subunit beta low > 112
Pseudomonas fluorescens SBW25-INTG 0.24 PFLU_RS11665 galactose mutarotase 0.48 PFLU_RS00545 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta low > 109
Pseudomonas fluorescens SBW25 0.24 PFLU_RS11665 galactose mutarotase 0.48 PFLU_RS00545 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta low > 109
Pseudomonas fluorescens FW300-N2C3 0.24 AO356_01315 aldose epimerase 0.48 AO356_10870 NAD synthetase low > 104
Pseudomonas fluorescens FW300-N2E2 0.24 Pf6N2E2_2135 Aldose 1-epimerase (EC 5.1.3.3) 0.48 Pf6N2E2_4040 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) low > 103
Pseudomonas simiae WCS417 0.24 PS417_11040 aldose epimerase 0.48 PS417_00560 NAD synthetase low > 88
Variovorax sp. OAS795 0.23 ABID97_RS06780 aldose epimerase family protein 0.45 ABID97_RS04440 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta low > 91
Sinorhizobium meliloti 1021 0.23 SMc03798 aldose 1-epimerase 0.46 SMc03938 NAD(P) transhydrogenase subunit beta low > 103
Alteromonas macleodii MIT1002 0.22 MIT1002_00187 Aldose 1-epimerase precursor 0.41 MIT1002_03907 NAD(P) transhydrogenase subunit beta low > 70
Agrobacterium fabrum C58 0.22 Atu2719 aldose epimerase 0.57 Atu2494 NAD(P)+ transhydrogenase beta chain low > 89
Rhizobium sp. OAE497 0.21 ABIE40_RS18585 aldose epimerase family protein 0.43 ABIE40_RS16590 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta low > 107
Phaeobacter inhibens DSM 17395 0.18 PGA1_262p00390 aldose 1-epimerase 0.57 PGA1_c10040 NAD(P) transhydrogenase subunit beta low > 62
Acidovorax sp. GW101-3H11 0.18 Ac3H11_3951 Aldose 1-epimerase (EC 5.1.3.3) 0.62 Ac3H11_662 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) low > 79
Azospirillum brasilense Sp245 0.17 AZOBR_RS31270 aldose 1-epimerase 0.49 AZOBR_RS06435 NAD synthetase 0.31 88
Hydrogenophaga sp. GW460-11-11-14-LB1 0.16 GFF791 Aldose 1-epimerase (EC 5.1.3.3) 0.44 GFF2606 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) low > 90
Dinoroseobacter shibae DFL-12 0.16 Dshi_2683 Aldose 1-epimerase (RefSeq) 0.54 Dshi_1234 NAD(P)(+) transhydrogenase (AB-specific) (RefSeq) low > 64

Not shown: 13 genomes with orthologs for HGI48_RS06620 only; 26 genomes with orthologs for HGI48_RS10910 only