| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pectobacterium carotovorum WPP14 | 1.0 | HER17_RS12035 | | MBL fold metallo-hydrolase | 1.0 | HER17_RS21245 | | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | 0.58 | 17 |
| Serratia liquefaciens MT49 | 0.81 | IAI46_08745 | | MBL fold metallo-hydrolase | 0.82 | IAI46_24235 | | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | low | > 86 |
| Dickeya dadantii 3937 | 0.78 | DDA3937_RS12920 | | MBL fold metallo-hydrolase | 0.86 | DDA3937_RS21255 | | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | low | > 74 |
| Dickeya dianthicola 67-19 | 0.78 | HGI48_RS12995 | | MBL fold metallo-hydrolase | 0.86 | HGI48_RS00055 | | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | low | > 71 |
| Dickeya dianthicola ME23 | 0.78 | DZA65_RS13455 | | MBL fold metallo-hydrolase | 0.85 | DZA65_RS00045 | | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | low | > 75 |
| Enterobacter sp. TBS_079 | 0.77 | MPMX20_01585 | | Hydroxyacylglutathione hydrolase GloC | 0.83 | MPMX20_04398 | | Ribosomal RNA large subunit methyltransferase J | low | > 85 |
| Enterobacter asburiae PDN3 | 0.77 | EX28DRAFT_2009 | | Zn-dependent hydrolases, including glyoxylases | 0.83 | EX28DRAFT_4062 | | Protein involved in catabolism of external DNA | low | > 76 |
| Escherichia coli ECRC62 | 0.77 | BNILDI_20205 | gloC | hydroxyacylglutathione hydrolase GloC | 0.82 | BNILDI_03215 | rlmJ | 23S rRNA (adenine(2030)-N(6))-methyltransferase | low | > 75 |
| Escherichia coli ECOR27 | 0.77 | NOLOHH_21950 | gloC | hydroxyacylglutathione hydrolase GloC | 0.82 | NOLOHH_08345 | rlmJ | 23S rRNA (adenine(2030)-N(6))-methyltransferase | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.77 | OHPLBJKB_02740 | | Hydroxyacylglutathione hydrolase GloC | 0.82 | OHPLBJKB_00204 | | Ribosomal RNA large subunit methyltransferase J | low | > 73 |
| Escherichia coli BL21 | 0.76 | ECD_00931 | | putative metal-binding enzyme | 0.82 | ECD_03348 | | 23S rRNA m(6)A2030 methyltransferase, SAM-dependent | low | > 61 |
| Escherichia coli ECOR38 | 0.76 | HEPCGN_23135 | gloC | hydroxyacylglutathione hydrolase GloC | 0.82 | HEPCGN_15320 | rlmJ | 23S rRNA (adenine(2030)-N(6))-methyltransferase | low | > 87 |
| Escherichia coli BW25113 | 0.76 | b0927 | ycbL | predicted metal-binding enzyme (NCBI) | 0.82 | b3499 | yhiR | predicted DNA (exogenous) processing protein (NCBI) | low | > 76 |
| Escherichia coli Nissle 1917 | 0.76 | ECOLIN_RS04905 | | hydroxyacylglutathione hydrolase GloC | 0.82 | ECOLIN_RS19990 | | 23S rRNA (adenine(2030)-N(6))-methyltransferase | low | > 55 |
| Escherichia coli ECRC102 | 0.76 | NIAGMN_03110 | gloC | hydroxyacylglutathione hydrolase GloC | 0.82 | NIAGMN_14175 | rlmJ | 23S rRNA (adenine(2030)-N(6))-methyltransferase | — | — |
| Escherichia coli ECRC100 | 0.76 | OKFHMN_05390 | gloC | hydroxyacylglutathione hydrolase GloC | 0.82 | OKFHMN_16410 | rlmJ | 23S rRNA (adenine(2030)-N(6))-methyltransferase | low | > 80 |
| Escherichia coli ECRC98 | 0.76 | JDDGAC_09000 | gloC | hydroxyacylglutathione hydrolase GloC | 0.82 | JDDGAC_20040 | rlmJ | 23S rRNA (adenine(2030)-N(6))-methyltransferase | low | > 86 |
| Escherichia coli ECRC99 | 0.76 | KEDOAH_22345 | gloC | hydroxyacylglutathione hydrolase GloC | 0.82 | KEDOAH_11735 | rlmJ | 23S rRNA (adenine(2030)-N(6))-methyltransferase | — | — |
| Escherichia coli ECRC101 | 0.76 | MCAODC_24780 | gloC | hydroxyacylglutathione hydrolase GloC | 0.82 | MCAODC_06925 | rlmJ | 23S rRNA (adenine(2030)-N(6))-methyltransferase | low | > 87 |
| Escherichia fergusonii Becca | 0.76 | EFB2_03137 | | Hydroxyacylglutathione hydrolase GloC | 0.82 | EFB2_00316 | | Ribosomal RNA large subunit methyltransferase J | low | > 86 |
| Klebsiella michiganensis M5al | 0.76 | BWI76_RS09865 | | MBL fold hydrolase | 0.81 | BWI76_RS26680 | | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | low | > 92 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.75 | GFF3684 | | Hypothetical metal-binding enzyme, YcbL homolog | 0.82 | GFF515 | | Protein involved in catabolism of external DNA | low | > 78 |
| Rahnella sp. WP5 | 0.73 | EX31_RS18150 | | MBL fold metallo-hydrolase | 0.82 | EX31_RS05170 | | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | low | > 89 |
| Pantoea sp. MT58 | 0.72 | IAI47_12770 | | MBL fold metallo-hydrolase | 0.81 | IAI47_01340 | | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.66 | LU632_RS09895 | | MBL fold metallo-hydrolase | 0.79 | LU632_RS19485 | | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | 0.54 | 8 |
| Marinobacter adhaerens HP15 | 0.64 | HP15_1191 | | metallo-beta-lactamase family protein | 0.30 | HP15_2563 | | protein containing DUF519 | 0.44 | 9 |
| Shewanella amazonensis SB2B | 0.62 | Sama_2142 | | metallo-beta-lactamase family protein (RefSeq) | 0.49 | Sama_3563 | | hypothetical protein (RefSeq) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.61 | SO3054 | | metallo-beta-lactamase family protein (NCBI ptt file) | 0.47 | SO4659 | | conserved hypothetical protein (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.61 | Shewana3_1493 | | beta-lactamase domain-containing protein (RefSeq) | 0.47 | Shewana3_4038 | | hypothetical protein (RefSeq) | low | > 73 |
| Azospirillum sp. SherDot2 | 0.61 | MPMX19_04818 | | Hydroxyacylglutathione hydrolase GloC | 0.43 | MPMX19_01202 | | Ribosomal RNA large subunit methyltransferase J | low | > 112 |
| Shewanella loihica PV-4 | 0.60 | Shew_2269 | | beta-lactamase domain-containing protein (RefSeq) | 0.48 | Shew_3648 | | hypothetical protein (RefSeq) | low | > 60 |
| Azospirillum brasilense Sp245 | 0.60 | AZOBR_RS19250 | | hypothetical protein | 0.46 | AZOBR_RS21900 | | lactate dehydrogenase | — | — |
| Rhodospirillum rubrum S1H | 0.59 | Rru_A1522 | | Beta-lactamase-like (NCBI) | 0.36 | Rru_A1938 | | Protein of unknown function DUF519 (NCBI) | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.59 | CSW01_06415 | | MBL fold metallo-hydrolase | 0.62 | CSW01_01005 | | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | low | > 62 |
| Paraburkholderia sabiae LMG 24235 | 0.58 | QEN71_RS00645 | | MBL fold metallo-hydrolase | 0.43 | QEN71_RS23895 | | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | low | > 153 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.58 | A4249_RS06505 | | MBL fold metallo-hydrolase | 0.20 | A4249_RS02525 | | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | low | > 48 |
| Alteromonas macleodii MIT1002 | 0.57 | MIT1002_03450 | | Beta-lactamase hydrolase-like protein | 0.33 | MIT1002_02015 | | Ribosomal RNA large subunit methyltransferase J | low | > 70 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.57 | GFF1871 | | Hypothetical metal-binding enzyme, YcbL homolog | 0.34 | GFF1683 | | Protein involved in catabolism of external DNA | low | > 90 |
| Paraburkholderia graminis OAS925 | 0.57 | ABIE53_000468 | | hydroxyacylglutathione hydrolase | 0.42 | ABIE53_001640 | | 23S rRNA (adenine2030-N6)-methyltransferase | low | > 113 |
| Caulobacter crescentus NA1000 | 0.57 | CCNA_01241 | | Zn-dependent hydrolase, glyoxalase II family | 0.25 | CCNA_01152 | | external DNA uptake/catabolism protein | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.57 | CCNA_01241 | | Zn-dependent hydrolase, glyoxalase II family | 0.25 | CCNA_01152 | | external DNA uptake/catabolism protein | low | > 67 |
| Burkholderia phytofirmans PsJN | 0.56 | BPHYT_RS01930 | | hypothetical protein | 0.41 | BPHYT_RS06880 | | competence protein ComJ | low | > 109 |
| Rhodopseudomonas palustris CGA009 | 0.55 | TX73_002945 | | MBL fold metallo-hydrolase | 0.34 | TX73_006025 | | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | low | > 86 |
| Cupriavidus basilensis FW507-4G11 | 0.55 | RR42_RS19750 | | MBL fold metallo-hydrolase | 0.41 | RR42_RS09005 | | competence protein ComJ | low | > 128 |
| Ralstonia sp. UNC404CL21Col | 0.54 | ABZR87_RS03825 | | MBL fold metallo-hydrolase | 0.40 | ABZR87_RS04360 | | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.54 | RPSI07_RS08720 | | MBL fold metallo-hydrolase | 0.40 | RPSI07_RS08205 | | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | — | — |
| Ralstonia solanacearum GMI1000 | 0.53 | RS_RS16370 | | MBL fold metallo-hydrolase | 0.39 | RS_RS16875 | | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.53 | RALBFv3_RS08505 | | MBL fold metallo-hydrolase | 0.40 | RALBFv3_RS09065 | | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | — | — |
| Ralstonia solanacearum UW163 | 0.53 | UW163_RS05105 | | MBL fold metallo-hydrolase | 0.40 | UW163_RS04530 | | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | — | — |
| Bosea sp. OAE506 | 0.52 | ABIE41_RS00100 | | MBL fold metallo-hydrolase | 0.36 | ABIE41_RS11490 | | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | — | — |
| Agrobacterium fabrum C58 | 0.52 | Atu2201 | | hydrolase | 0.40 | Atu1135 | | hypothetical protein | low | > 89 |
| Sinorhizobium meliloti 1021 | 0.51 | SMc01587 | | hypothetical protein | 0.40 | SMc00608 | | hypothetical protein | low | > 103 |
| Rhizobium sp. OAE497 | 0.50 | ABIE40_RS12965 | | MBL fold metallo-hydrolase | 0.41 | ABIE40_RS06520 | | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | low | > 107 |
| Acinetobacter radioresistens SK82 | 0.49 | MPMX26_00296 | | Hydroxyacylglutathione hydrolase GloC | 0.36 | MPMX26_02660 | | Ribosomal RNA large subunit methyltransferase J | low | > 36 |
| Acidovorax sp. GW101-3H11 | 0.46 | Ac3H11_3348 | | Hypothetical metal-binding enzyme, YcbL homolog | 0.31 | Ac3H11_3047 | | Protein involved in catabolism of external DNA | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.33 | PfGW456L13_1623 | | Hypothetical metal-binding enzyme, YcbL homolog | 0.40 | PfGW456L13_219 | | Protein involved in catabolism of external DNA | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.32 | Pf1N1B4_2963 | | Hypothetical metal-binding enzyme, YcbL homolog | 0.40 | Pf1N1B4_1481 | | Protein involved in catabolism of external DNA | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.32 | AO353_15160 | | MBL fold metallo-hydrolase | 0.40 | AO353_12840 | | lactate dehydrogenase | low | > 101 |
| Pseudomonas stutzeri RCH2 | 0.32 | Psest_3219 | | Zn-dependent hydrolases, including glyoxylases | 0.41 | Psest_0408 | | Protein involved in catabolism of external DNA | low | > 67 |
| Pseudomonas putida KT2440 | 0.32 | PP_0772 | | Metallo-beta-lactamase family protein | 0.43 | PP_4945 | | 23S rRNA m(6)A2030 methyltransferase | 0.11 | 75 |
| Pseudomonas fluorescens SBW25-INTG | 0.31 | PFLU_RS04625 | | MBL fold metallo-hydrolase | 0.40 | PFLU_RS02255 | | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.31 | PFLU_RS04625 | | MBL fold metallo-hydrolase | 0.40 | PFLU_RS02255 | | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | low | > 109 |
| Pseudomonas simiae WCS417 | 0.31 | PS417_04560 | | beta-lactamase | 0.40 | PS417_02200 | | lactate dehydrogenase | — | — |
| Pseudomonas sp. S08-1 | 0.29 | OH686_06295 | | MBL-fold metallo-hydrolase superfamily | 0.40 | OH686_09780 | | 23S rRNA (adenine(2030)-N(6))-methyltransferase | low | > 80 |
| Magnetospirillum magneticum AMB-1 | 0.23 | AMB_RS06135 | | MBL fold metallo-hydrolase | 0.44 | AMB_RS03020 | | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | low | > 64 |
Not shown: 19 genomes with orthologs for HER17_RS12035 only; 16 genomes with orthologs for HER17_RS21245 only