Conservation of cofitness between HER17_RS13450 and HER17_RS19085 in Pectobacterium carotovorum WPP14

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS13450 malonyl-ACP O-methyltransferase BioC 1.0 HER17_RS19085 DNA repair protein RadA 0.72 2
Serratia liquefaciens MT49 0.63 IAI46_06535 malonyl-ACP O-methyltransferase BioC 0.92 IAI46_02945 DNA repair protein RadA low > 86
Dickeya dadantii 3937 0.62 DDA3937_RS08520 malonyl-ACP O-methyltransferase BioC 0.90 DDA3937_RS02420 DNA repair protein RadA low > 74
Dickeya dianthicola 67-19 0.61 HGI48_RS08685 malonyl-ACP O-methyltransferase BioC 0.90 HGI48_RS02380 DNA repair protein RadA low > 71
Dickeya dianthicola ME23 0.61 DZA65_RS08975 malonyl-ACP O-methyltransferase BioC 0.90 DZA65_RS02485 DNA repair protein RadA low > 75
Rahnella sp. WP5 0.51 EX31_RS23705 malonyl-ACP O-methyltransferase BioC 0.93 EX31_RS04030 DNA repair protein RadA low > 89
Pantoea sp. MT58 0.50 IAI47_13520 malonyl-ACP O-methyltransferase BioC 0.91 IAI47_16345 DNA repair protein RadA low > 76
Erwinia tracheiphila SCR3 0.50 LU632_RS09140 bioC malonyl-ACP O-methyltransferase BioC 0.92 LU632_RS02550 radA DNA repair protein RadA — —
Escherichia coli ECOR27 0.47 NOLOHH_22760 bioC malonyl-ACP O-methyltransferase BioC 0.92 NOLOHH_03520 radA DNA repair protein RadA low > 75
Escherichia coli ECRC62 0.47 BNILDI_21030 bioC malonyl-ACP O-methyltransferase BioC 0.92 BNILDI_08075 radA DNA repair protein RadA low > 75
Escherichia coli ECOR38 0.47 HEPCGN_01650 bioC malonyl-ACP O-methyltransferase BioC 0.92 HEPCGN_09195 radA DNA repair protein RadA low > 87
Escherichia coli BW25113 0.46 b0777 bioC predicted methltransferase, enzyme of biotin synthesis (NCBI) 0.92 b4389 radA predicted repair protein (NCBI) low > 76
Escherichia coli BL21 0.46 ECD_00744 malonyl-ACP O-methyltransferase, SAM-dependent 0.92 ECD_04265 DNA repair protein low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_02936 Malonyl-[acyl-carrier protein] O-methyltransferase 0.92 OHPLBJKB_03672 DNA repair protein RadA low > 73
Escherichia coli ECRC100 0.46 OKFHMN_06390 bioC malonyl-ACP O-methyltransferase BioC 0.92 OKFHMN_11195 radA DNA repair protein RadA low > 80
Escherichia coli ECRC99 0.46 KEDOAH_21520 bioC malonyl-ACP O-methyltransferase BioC 0.92 KEDOAH_16960 radA DNA repair protein RadA — —
Escherichia coli ECRC98 0.46 JDDGAC_10025 bioC malonyl-ACP O-methyltransferase BioC 0.92 JDDGAC_14790 radA DNA repair protein RadA low > 86
Escherichia coli ECRC101 0.46 MCAODC_25605 bioC malonyl-ACP O-methyltransferase BioC 0.92 MCAODC_01710 radA DNA repair protein RadA low > 87
Escherichia fergusonii Becca 0.46 EFB2_03328 Malonyl-[acyl-carrier protein] O-methyltransferase 0.92 EFB2_04057 DNA repair protein RadA low > 86
Escherichia coli ECRC102 0.46 NIAGMN_04435 bioC malonyl-ACP O-methyltransferase BioC 0.92 NIAGMN_09045 radA DNA repair protein RadA — —
Escherichia coli Nissle 1917 0.46 ECOLIN_RS04140 malonyl-ACP O-methyltransferase BioC 0.92 ECOLIN_RS25190 DNA repair protein RadA low > 55
Enterobacter sp. TBS_079 0.44 MPMX20_01405 Malonyl-[acyl-carrier protein] O-methyltransferase 0.92 MPMX20_00694 DNA repair protein RadA low > 85
Enterobacter asburiae PDN3 0.44 EX28DRAFT_2214 malonyl-acyl carrier protein O-methyltransferase BioC 0.92 EX28DRAFT_3597 DNA repair protein RadA low > 76
Klebsiella michiganensis M5al 0.44 BWI76_RS08770 malonyl-ACP O-methyltransferase BioC 0.92 BWI76_RS04165 DNA repair protein RadA low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF673 Biotin synthesis protein BioC 0.92 GFF1057 DNA repair protein RadA low > 78
Vibrio cholerae E7946 ATCC 55056 0.34 CSW01_05655 malonyl-[acyl-carrier protein] O-methyltransferase BioC 0.77 CSW01_11870 DNA repair protein RadA low > 62
Pseudomonas stutzeri RCH2 0.34 Psest_0414 biotin biosynthesis protein BioC 0.62 Psest_3401 DNA repair protein RadA low > 67
Pseudomonas sp. S08-1 0.34 OH686_10340 malonyl-acyl carrier protein O-methyltransferase BioC 0.63 OH686_16185 DNA repair protein RadA low > 80
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_14150 malonyl-[acyl-carrier protein] O-methyltransferase BioC 0.63 AO356_15680 DNA repair protein RadA low > 104
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_4763 Biotin synthesis protein BioC 0.63 Pf6N2E2_5076 DNA repair protein RadA low > 103
Pseudomonas sp. RS175 0.31 PFR28_04100 Malonyl-[acyl-carrier protein] O-methyltransferase 0.63 PFR28_03792 DNA repair protein RadA low > 88
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_1150 Biotin synthesis protein BioC 0.63 PfGW456L13_1442 DNA repair protein RadA low > 87
Pseudomonas simiae WCS417 0.31 PS417_25990 malonyl-CoA O-methyltransferase 0.62 PS417_24305 DNA repair protein RadA low > 88
Pseudomonas fluorescens SBW25 0.31 PFLU_RS27635 malonyl-ACP O-methyltransferase BioC 0.62 PFLU_RS26230 DNA repair protein RadA low > 109
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS27635 malonyl-ACP O-methyltransferase BioC 0.62 PFLU_RS26230 DNA repair protein RadA low > 109
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_07510 malonyl-[acyl-carrier protein] O-methyltransferase BioC 0.62 AO353_13980 DNA repair protein RadA low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_4684 biotin synthesis protein BioC 0.62 Psyr_4275 DNA replication and repair protein RadA low > 86
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_4684 biotin synthesis protein BioC 0.62 Psyr_4275 DNA replication and repair protein RadA low > 86
Pseudomonas fluorescens FW300-N1B4 0.31 Pf1N1B4_2490 Biotin synthesis protein BioC 0.63 Pf1N1B4_2768 DNA repair protein RadA low > 87
Pseudomonas putida KT2440 0.30 PP_0365 Malonyl-[acyl-carrier protein] O-methyltransferase 0.61 PP_4644 DNA repair enzyme low > 96
Kangiella aquimarina DSM 16071 0.28 B158DRAFT_0867 biotin biosynthesis protein BioC 0.60 B158DRAFT_0877 DNA replication and repair protein RadA — —
Marinobacter adhaerens HP15 0.27 HP15_2483 protein containing methyltransferase type 11 domain 0.68 HP15_487 DNA repair protein RadA low > 73
Dechlorosoma suillum PS 0.24 Dsui_2883 biotin biosynthesis protein BioC 0.52 Dsui_2413 DNA repair protein RadA low > 51
Rhodanobacter denitrificans FW104-10B01 0.21 LRK54_RS10240 malonyl-ACP O-methyltransferase BioC 0.58 LRK54_RS02525 DNA repair protein RadA — —
Rhodanobacter denitrificans MT42 0.21 LRK55_RS09880 malonyl-ACP O-methyltransferase BioC 0.58 LRK55_RS02280 DNA repair protein RadA — —
Rhodanobacter sp. FW510-T8 0.21 OKGIIK_13670 bioC malonyl-ACP O-methyltransferase BioC 0.58 OKGIIK_09580 radA DNA repair protein RadA — —
Lysobacter sp. OAE881 0.19 ABIE51_RS01160 malonyl-ACP O-methyltransferase BioC 0.55 ABIE51_RS07685 DNA repair protein RadA — —
Xanthomonas campestris pv. campestris strain 8004 0.18 Xcc-8004.498.1 Biotin synthesis protein BioC 0.58 Xcc-8004.3812.1 DNA repair protein RadA — —
Shewanella oneidensis MR-1 0.18 SO2738 bioC biotin synthesis protein BioC (NCBI ptt file) 0.77 SO1226 radA DNA repair protein RadA (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.18 Shewana3_2517 biotin biosynthesis protein BioC (RefSeq) 0.77 Shewana3_1049 DNA repair protein RadA (RefSeq) — —
Dyella japonica UNC79MFTsu3.2 0.18 ABZR86_RS15820 malonyl-ACP O-methyltransferase BioC 0.58 ABZR86_RS08845 DNA repair protein RadA — —
Shewanella amazonensis SB2B 0.17 Sama_1440 biotin synthesis protein BioC (RefSeq) 0.76 Sama_0981 DNA repair protein RadA (RefSeq) — —
Castellaniella sp019104865 MT123 0.14 ABCV34_RS15290 methyltransferase domain-containing protein 0.50 ABCV34_RS02345 DNA repair protein RadA low > 48
Paraburkholderia sabiae LMG 24235 0.14 QEN71_RS01485 methyltransferase domain-containing protein 0.54 QEN71_RS06320 DNA repair protein RadA — —
Acinetobacter radioresistens SK82 0.12 MPMX26_02452 Malonyl-[acyl-carrier protein] O-methyltransferase 0.58 MPMX26_02235 DNA repair protein RadA low > 36
Ralstonia solanacearum GMI1000 0.12 RS_RS01775 SAM-dependent methyltransferase 0.51 RS_RS06880 DNA repair protein RadA — —
Ralstonia solanacearum UW163 0.11 UW163_RS02645 SAM-dependent methyltransferase 0.52 UW163_RS13540 DNA repair protein RadA — —
Ralstonia solanacearum IBSBF1503 0.11 RALBFv3_RS10935 SAM-dependent methyltransferase 0.52 RALBFv3_RS00210 DNA repair protein RadA — —
Bacteroides thetaiotaomicron VPI-5482 0.11 BT1445 putative biotin synthesis protein bioC (NCBI ptt file) 0.40 BT2406 putative DNA repair protein (NCBI ptt file) low > 81

Not shown: 0 genomes with orthologs for HER17_RS13450 only; 43 genomes with orthologs for HER17_RS19085 only