Conservation of cofitness between HER17_RS10965 and HER17_RS17265 in Pectobacterium carotovorum WPP14

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS10965 acyl-CoA thioester hydrolase YciA 1.0 HER17_RS17265 oxygen-dependent coproporphyrinogen oxidase 0.68 17
Dickeya dianthicola ME23 0.89 DZA65_RS10910 acyl-CoA thioester hydrolase YciA 0.79 DZA65_RS04275 oxygen-dependent coproporphyrinogen oxidase
Dickeya dadantii 3937 0.89 DDA3937_RS10430 acyl-CoA thioester hydrolase YciA 0.81 DDA3937_RS04365 oxygen-dependent coproporphyrinogen oxidase
Dickeya dianthicola 67-19 0.88 HGI48_RS10435 acyl-CoA thioester hydrolase YciA 0.80 HGI48_RS04355 oxygen-dependent coproporphyrinogen oxidase low > 71
Rahnella sp. WP5 0.85 EX31_RS10010 acyl-CoA thioester hydrolase YciA 0.80 EX31_RS20260 oxygen-dependent coproporphyrinogen oxidase low > 89
Serratia liquefaciens MT49 0.84 IAI46_14085 acyl-CoA thioester hydrolase YciA 0.78 IAI46_18545 oxygen-dependent coproporphyrinogen oxidase low > 86
Enterobacter asburiae PDN3 0.80 EX28DRAFT_0923 Acyl-CoA hydrolase 0.72 EX28DRAFT_0199 coproporphyrinogen oxidase (EC 1.3.3.3) low > 76
Pantoea sp. MT58 0.80 IAI47_09135 acyl-CoA thioester hydrolase YciA 0.76 IAI47_05360 oxygen-dependent coproporphyrinogen oxidase
Enterobacter sp. TBS_079 0.80 MPMX20_02575 putative acyl-CoA thioester hydrolase 0.72 MPMX20_03323 Oxygen-dependent coproporphyrinogen-III oxidase low > 85
Klebsiella michiganensis M5al 0.79 BWI76_RS11790 acyl-CoA thioesterase 0.70 BWI76_RS20740 coproporphyrinogen III oxidase low > 92
Escherichia fergusonii Becca 0.79 EFB2_02672 putative acyl-CoA thioester hydrolase 0.72 EFB2_01443 Oxygen-dependent coproporphyrinogen-III oxidase low > 86
Escherichia coli BL21 0.79 ECD_01227 acyl-CoA esterase 0.73 ECD_02336 coproporphyrinogen III oxidase low > 61
Escherichia coli BW25113 0.79 b1253 yciA predicted hydrolase (NCBI) 0.73 b2436 hemF coproporphyrinogen III oxidase (NCBI) low > 76
Escherichia coli ECOR38 0.79 HEPCGN_25145 yciA acyl-CoA thioester hydrolase YciA 0.73 HEPCGN_21270 hemF oxygen-dependent coproporphyrinogen oxidase low > 87
Escherichia coli ECRC62 0.79 BNILDI_18515 yciA acyl-CoA thioester hydrolase YciA 0.73 BNILDI_12640 hemF oxygen-dependent coproporphyrinogen oxidase low > 75
Escherichia coli ECOR27 0.79 NOLOHH_20370 yciA acyl-CoA thioester hydrolase YciA 0.73 NOLOHH_13775 hemF oxygen-dependent coproporphyrinogen oxidase low > 75
Escherichia coli Nissle 1917 0.79 ECOLIN_RS07565 acyl-CoA thioester hydrolase YciA 0.73 ECOLIN_RS13965 oxygen-dependent coproporphyrinogen oxidase low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_02430 putative acyl-CoA thioester hydrolase 0.73 OHPLBJKB_01286 Oxygen-dependent coproporphyrinogen-III oxidase low > 73
Escherichia coli ECRC100 0.79 OKFHMN_28680 yciA acyl-CoA thioester hydrolase YciA 0.71 OKFHMN_22095 hemF oxygen-dependent coproporphyrinogen oxidase low > 80
Escherichia coli ECRC99 0.79 KEDOAH_25675 yciA acyl-CoA thioester hydrolase YciA 0.71 KEDOAH_06125 hemF oxygen-dependent coproporphyrinogen oxidase
Escherichia coli ECRC101 0.79 MCAODC_21580 yciA acyl-CoA thioester hydrolase YciA 0.71 MCAODC_12625 hemF oxygen-dependent coproporphyrinogen oxidase low > 87
Escherichia coli ECRC102 0.79 NIAGMN_27555 yciA acyl-CoA thioester hydrolase YciA 0.71 NIAGMN_19865 hemF oxygen-dependent coproporphyrinogen oxidase
Escherichia coli ECRC98 0.79 JDDGAC_05895 yciA acyl-CoA thioester hydrolase YciA 0.71 JDDGAC_26045 hemF oxygen-dependent coproporphyrinogen oxidase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF2735 Acyl-CoA thioesterase YciA, involved in membrane biogenesis 0.73 GFF2066 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) low > 78
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_08560 acyl-CoA thioester hydrolase YciA 0.66 CSW01_00275 coproporphyrinogen III oxidase
Acinetobacter radioresistens SK82 0.48 MPMX26_02646 putative acyl-CoA thioester hydrolase 0.58 MPMX26_02746 Oxygen-dependent coproporphyrinogen-III oxidase
Bosea sp. OAE506 0.47 ABIE41_RS12055 acyl-CoA thioesterase 0.33 ABIE41_RS11175 oxygen-dependent coproporphyrinogen oxidase
Azospirillum sp. SherDot2 0.45 MPMX19_00971 putative acyl-CoA thioester hydrolase 0.34 MPMX19_05010 Oxygen-dependent coproporphyrinogen-III oxidase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_5043 Thioesterase superfamily 0.66 Psyr_0024 coproporphyrinogen oxidase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.44 GFF516 Acyl-CoA hydrolase (EC 3.1.2.20) 0.58 GFF4526 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3)
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_5043 Thioesterase superfamily 0.66 Psyr_0024 coproporphyrinogen oxidase
Caulobacter crescentus NA1000 0.44 CCNA_00190 acyl-CoA hydrolase 0.32 CCNA_00540 coproporphyrinogen III oxidase
Caulobacter crescentus NA1000 Δfur 0.44 CCNA_00190 acyl-CoA hydrolase 0.32 CCNA_00540 coproporphyrinogen III oxidase
Pseudomonas sp. RS175 0.44 PFR28_04491 putative acyl-CoA thioester hydrolase 0.66 PFR28_04656 Oxygen-dependent coproporphyrinogen-III oxidase
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_4077 cytosolic long-chain acyl-CoA thioester hydrolase family protein 0.66 Pf6N2E2_4129 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3)
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_11055 long-chain acyl-CoA thioester hydrolase 0.66 AO356_11310 coproporphyrinogen III oxidase
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS29780 acyl-CoA thioesterase 0.65 PFLU_RS00115 oxygen-dependent coproporphyrinogen oxidase
Pseudomonas simiae WCS417 0.43 PS417_28095 long-chain acyl-CoA thioester hydrolase 0.64 PS417_00120 coproporphyrinogen III oxidase
Pseudomonas fluorescens SBW25 0.43 PFLU_RS29780 acyl-CoA thioesterase 0.65 PFLU_RS00115 oxygen-dependent coproporphyrinogen oxidase
Agrobacterium fabrum C58 0.43 Atu3861 acyl-CoA hydrolase 0.30 Atu2247 coproporphyrinogen III oxidase
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_751 cytosolic long-chain acyl-CoA thioester hydrolase family protein 0.67 PfGW456L13_645 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3)
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_09915 long-chain acyl-CoA thioester hydrolase 0.66 AO353_10665 coproporphyrinogen III oxidase
Pseudomonas putida KT2440 0.43 PP_5331 Long-chain acyl-CoA thioester hydrolase 0.66 PP_0073 Coproporphyrinogen-III oxidase, aerobic
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_2032 cytosolic long-chain acyl-CoA thioester hydrolase family protein 0.67 Pf1N1B4_1907 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3)
Dechlorosoma suillum PS 0.43 Dsui_0322 acyl-CoA hydrolase 0.63 Dsui_1597 coproporphyrinogen III oxidase
Pseudomonas stutzeri RCH2 0.43 Psest_0218 Acyl-CoA hydrolase 0.67 Psest_0028 Coproporphyrinogen III oxidase low > 67
Pseudomonas sp. S08-1 0.43 OH686_13400 cytosolic long-chain acyl-CoA thioester hydrolase family protein 0.66 OH686_12490 Coproporphyrinogen III oxidase, aerobic
Acidovorax sp. GW101-3H11 0.43 Ac3H11_1945 Acyl-CoA hydrolase (EC 3.1.2.20) 0.59 Ac3H11_2420 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3)
Sinorhizobium meliloti 1021 0.42 SMc04228 hypothetical protein 0.31 SMc00180 coproporphyrinogen III oxidase
Ralstonia solanacearum UW163 0.42 UW163_RS02050 acyl-CoA thioesterase 0.62 UW163_RS10120 coproporphyrinogen III oxidase
Variovorax sp. OAS795 0.42 ABID97_RS05905 acyl-CoA thioesterase 0.59 ABID97_RS16730 oxygen-dependent coproporphyrinogen oxidase
Ralstonia solanacearum PSI07 0.42 RPSI07_RS21675 acyl-CoA thioesterase 0.62 RPSI07_RS13675 oxygen-dependent coproporphyrinogen oxidase
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS11535 acyl-CoA thioesterase 0.62 RALBFv3_RS03550 coproporphyrinogen III oxidase
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS02530 acyl-CoA hydrolase 0.61 RR42_RS04725 coproporphyrinogen III oxidase
Variovorax sp. SCN45 0.42 GFF4599 Acyl-CoA hydrolase (EC 3.1.2.20) 0.59 GFF301 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3)
Castellaniella sp019104865 MT123 0.41 ABCV34_RS09595 acyl-CoA thioesterase 0.58 ABCV34_RS02545 oxygen-dependent coproporphyrinogen oxidase low > 48
Ralstonia solanacearum GMI1000 0.41 RS_RS02365 acyl-CoA thioesterase 0.62 RS_RS11000 coproporphyrinogen III oxidase
Paraburkholderia graminis OAS925 0.41 ABIE53_000793 acyl-CoA thioesterase YciA 0.62 ABIE53_001544 coproporphyrinogen III oxidase low > 113
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS07500 acyl-CoA thioesterase 0.62 ABZR87_RS15415 oxygen-dependent coproporphyrinogen oxidase
Paraburkholderia bryophila 376MFSha3.1 0.41 H281DRAFT_04633 (3S)-malyl-CoA thioesterase 0.62 H281DRAFT_04520 coproporphyrinogen oxidase
Rhizobium sp. OAE497 0.40 ABIE40_RS10785 acyl-CoA thioesterase 0.30 ABIE40_RS13225 oxygen-dependent coproporphyrinogen oxidase
Paraburkholderia sabiae LMG 24235 0.40 QEN71_RS02095 acyl-CoA thioesterase 0.62 QEN71_RS24405 oxygen-dependent coproporphyrinogen oxidase
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS03270 acyl-CoA hydrolase 0.62 BPHYT_RS06400 oxygen-dependent coproporphyrinogen-III oxidase low > 109
Sphingomonas koreensis DSMZ 15582 0.38 Ga0059261_3714 Acyl-CoA hydrolase 0.29 Ga0059261_3217 coproporphyrinogen oxidase (EC 1.3.3.3)
Herbaspirillum seropedicae SmR1 0.38 HSERO_RS19275 acyl-CoA hydrolase 0.62 HSERO_RS17765 coproporphyrinogen III oxidase

Not shown: 6 genomes with orthologs for HER17_RS10965 only; 20 genomes with orthologs for HER17_RS17265 only