Conservation of cofitness between HER17_RS00495 and HER17_RS12010 in Pectobacterium carotovorum WPP14

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00495 branched-chain amino acid ABC transporter substrate-binding protein 1.0 HER17_RS12010 aminopeptidase N 0.94 17
Dickeya dadantii 3937 0.91 DDA3937_RS00660 branched-chain amino acid ABC transporter substrate-binding protein 0.85 DDA3937_RS12885 aminopeptidase N low > 74
Rahnella sp. WP5 0.88 EX31_RS14805 branched-chain amino acid ABC transporter substrate-binding protein 0.80 EX31_RS18125 aminopeptidase N low > 89
Dickeya dianthicola 67-19 0.88 HGI48_RS20730 high-affinity branched-chain amino acid ABC transporter substrate-binding protein 0.84 HGI48_RS12955 aminopeptidase N low > 71
Dickeya dianthicola ME23 0.88 DZA65_RS21740 branched-chain amino acid ABC transporter substrate-binding protein 0.84 DZA65_RS13420 aminopeptidase N low > 75
Serratia liquefaciens MT49 0.87 IAI46_00960 branched-chain amino acid ABC transporter substrate-binding protein 0.80 IAI46_08775 aminopeptidase N low > 86
Erwinia tracheiphila SCR3 0.82 LU632_RS19255 branched-chain amino acid ABC transporter substrate-binding protein 0.75 LU632_RS09930 pepN aminopeptidase N low > 74
Escherichia coli ECRC99 0.79 KEDOAH_11400 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.78 KEDOAH_22370 pepN aminopeptidase N
Escherichia coli ECOR27 0.79 NOLOHH_08535 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.78 NOLOHH_21920 pepN aminopeptidase N low > 75
Escherichia coli ECRC98 0.79 JDDGAC_20370 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.78 JDDGAC_08975 pepN aminopeptidase N low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_00245 Leucine-specific-binding protein 0.78 OHPLBJKB_02734 Aminopeptidase N low > 73
Escherichia coli ECRC102 0.79 NIAGMN_14510 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.78 NIAGMN_03085 pepN aminopeptidase N
Escherichia coli ECRC100 0.79 OKFHMN_16740 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.78 OKFHMN_05365 pepN aminopeptidase N low > 80
Escherichia coli ECRC62 0.79 BNILDI_02970 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.78 BNILDI_20175 pepN aminopeptidase N low > 75
Escherichia coli ECRC101 0.79 MCAODC_07270 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.78 MCAODC_24755 pepN aminopeptidase N low > 87
Escherichia coli BW25113 0.79 b3458 livK leucine transporter subunit (NCBI) 0.78 b0932 pepN aminopeptidase N (NCBI) low > 76
Escherichia fergusonii Becca 0.79 EFB2_00364 Leucine-specific-binding protein 0.78 EFB2_03132 Aminopeptidase N low > 86
Escherichia coli ECOR38 0.79 HEPCGN_15560 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.78 HEPCGN_23160 pepN aminopeptidase N low > 87
Escherichia coli Nissle 1917 0.79 ECOLIN_RS19775 high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.78 ECOLIN_RS04935 aminopeptidase N low > 55
Enterobacter asburiae PDN3 0.79 EX28DRAFT_4290 ABC-type branched-chain amino acid transport systems, periplasmic component 0.78 EX28DRAFT_2004 aminopeptidase N, Escherichia coli type low > 76
Enterobacter sp. TBS_079 0.78 MPMX20_04334 Leucine-specific-binding protein 0.77 MPMX20_01590 Aminopeptidase N 0.19 30
Escherichia coli BL21 0.78 ECD_03307 leucine transporter subunit 0.78 ECD_00936 aminopeptidase N low > 61
Pantoea sp. MT58 0.78 IAI47_01565 branched-chain amino acid ABC transporter substrate-binding protein 0.77 IAI47_12745 aminopeptidase N low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF545 High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) 0.77 GFF3235 Membrane alanine aminopeptidase N (EC 3.4.11.2) low > 78
Klebsiella michiganensis M5al 0.77 BWI76_RS26350 branched chain amino acid ABC transporter substrate-binding protein 0.76 BWI76_RS09890 aminopeptidase N low > 92
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_3845 L-leucine-binding protein / L-valine-binding protein / L-isoleucine-binding protein 0.48 Psyr_1690 Peptidase M1, membrane alanine aminopeptidase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_3845 L-leucine-binding protein / L-valine-binding protein / L-isoleucine-binding protein 0.48 Psyr_1690 Peptidase M1, membrane alanine aminopeptidase low > 86
Pseudomonas stutzeri RCH2 0.61 Psest_1312 ABC-type branched-chain amino acid transport systems, periplasmic component 0.48 Psest_1922 aminopeptidase N, Escherichia coli type low > 67
Pseudomonas fluorescens FW300-N2C3 0.61 AO356_05320 leucine ABC transporter substrate-binding protein 0.49 AO356_24560 aminopeptidase low > 104
Pseudomonas fluorescens FW300-N2E3 0.61 AO353_17125 leucine ABC transporter substrate-binding protein 0.48 AO353_23630 aminopeptidase low > 101
Pseudomonas fluorescens FW300-N2E2 0.60 Pf6N2E2_2921 ABC transporter for L-leucine/L-phenylalanine/D-alanine, substrate-binding component LivK (from data) 0.48 Pf6N2E2_604 Membrane alanine aminopeptidase N (EC 3.4.11.2) low > 103
Pseudomonas fluorescens FW300-N1B4 0.60 Pf1N1B4_3218 High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) 0.47 Pf1N1B4_4614 Membrane alanine aminopeptidase N (EC 3.4.11.2) low > 87
Pseudomonas fluorescens GW456-L13 0.60 PfGW456L13_4606 High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) 0.48 PfGW456L13_3325 Membrane alanine aminopeptidase N (EC 3.4.11.2) low > 87
Pseudomonas sp. S08-1 0.60 OH686_04605 Branched-chain amino acid ABC transporter, substrate-binding protein LivJ 0.48 OH686_04270 aminopeptidase N low > 80
Pseudomonas sp. RS175 0.59 PFR28_00540 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein 0.48 PFR28_01574 Aminopeptidase N low > 88
Pseudomonas putida KT2440 0.59 PP_1141 branched-chain amino acids ABC transporter - periplasmic leucine binding subunit 0.49 PP_2017 aminopeptidase N low > 96
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS06645 branched-chain amino acid ABC transporter substrate-binding protein 0.49 PFLU_RS13095 aminopeptidase N low > 109
Pseudomonas fluorescens SBW25 0.59 PFLU_RS06645 branched-chain amino acid ABC transporter substrate-binding protein 0.49 PFLU_RS13095 aminopeptidase N 0.56 71
Pseudomonas simiae WCS417 0.59 PS417_06615 ABC transporter for branched-chain amino acids, substrate-binding component (from data) 0.48 PS417_12395 aminopeptidase N low > 88
Marinobacter adhaerens HP15 0.58 HP15_3055 high-affinity leucine-specific leucine-specific-binding periplasmic protein of high-affinity branched-chain amino acid ABC transporter transport system periplasmic binding protein 0.46 HP15_1065 aminopeptidase N low > 73
Herbaspirillum seropedicae SmR1 0.51 HSERO_RS08270 amino acid ABC transporter substrate-binding protein 0.48 HSERO_RS17720 aminopeptidase N low > 78
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS14425 leucine ABC transporter substrate-binding protein 0.46 RR42_RS05200 aminopeptidase N low > 128
Castellaniella sp019104865 MT123 0.47 ABCV34_RS03585 branched-chain amino acid ABC transporter substrate-binding protein 0.39 ABCV34_RS02570 aminopeptidase N low > 48
Azospirillum sp. SherDot2 0.38 MPMX19_04840 Leu/Ile/Val-binding protein 0.49 MPMX19_04335 Aminopeptidase N low > 112
Sinorhizobium meliloti 1021 0.37 SMc00078 Leu/Ile/Val-binding protein 0.43 SMc02370 aminopeptidase N low > 103
Rhizobium sp. OAE497 0.35 ABIE40_RS14690 branched-chain amino acid ABC transporter substrate-binding protein 0.41 ABIE40_RS05720 aminopeptidase N low > 107
Azospirillum brasilense Sp245 0.33 AZOBR_RS08260 L-proline and D-alanine ABC transporter, substrate-binding component (from data) 0.49 AZOBR_RS14865 aminopeptidase N low > 97
Agrobacterium fabrum C58 0.33 Atu2422 ABC transporter, substrate binding protein (amino acid) 0.40 Atu0984 aminopeptidase N low > 89
Variovorax sp. OAS795 0.30 ABID97_RS27585 branched-chain amino acid ABC transporter substrate-binding protein 0.42 ABID97_RS21770 aminopeptidase N low > 91
Variovorax sp. SCN45 0.27 GFF237 ABC-type branched-chain amino acid transport systems, periplasmic component 0.42 GFF3118 Membrane alanine aminopeptidase N (EC 3.4.11.2) 0.69 37
Paraburkholderia bryophila 376MFSha3.1 0.25 H281DRAFT_02161 amino acid/amide ABC transporter substrate-binding protein, HAAT family 0.45 H281DRAFT_03988 alanyl aminopeptidase. Metallo peptidase. MEROPS family M01 low > 103
Paraburkholderia sabiae LMG 24235 0.25 QEN71_RS00600 branched-chain amino acid ABC transporter substrate-binding protein 0.44 QEN71_RS03785 aminopeptidase N low > 153
Paraburkholderia graminis OAS925 0.25 ABIE53_000461 branched-chain amino acid transport system substrate-binding protein 0.44 ABIE53_003216 aminopeptidase N low > 113
Burkholderia phytofirmans PsJN 0.24 BPHYT_RS01885 branched-chain amino acid ABC transporter substrate-binding protein 0.45 BPHYT_RS15210 aminopeptidase N low > 109
Ralstonia solanacearum UW163 0.24 UW163_RS08975 branched-chain amino acid ABC transporter substrate-binding protein 0.46 UW163_RS10455 aminopeptidase N
Ralstonia solanacearum IBSBF1503 0.24 RALBFv3_RS04695 branched-chain amino acid ABC transporter substrate-binding protein 0.46 RALBFv3_RS03270 aminopeptidase N 0.73 41
Ralstonia solanacearum PSI07 0.24 RPSI07_RS12690 branched-chain amino acid ABC transporter substrate-binding protein 0.46 RPSI07_RS14040 aminopeptidase N low > 81
Ralstonia solanacearum GMI1000 0.24 RS_RS12255 branched-chain amino acid ABC transporter substrate-binding protein 0.46 RS_RS10660 aminopeptidase N low > 80
Ralstonia sp. UNC404CL21Col 0.23 ABZR87_RS00315 branched-chain amino acid ABC transporter substrate-binding protein 0.45 ABZR87_RS15120 aminopeptidase N low > 80
Acidovorax sp. GW101-3H11 0.20 Ac3H11_4169 Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) 0.42 Ac3H11_2633 Membrane alanine aminopeptidase N (EC 3.4.11.2) low > 79
Dinoroseobacter shibae DFL-12 0.12 Dshi_1522 Extracellular ligand-binding receptor (RefSeq) 0.39 Dshi_1223 aminopeptidase N (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.10 PGA1_c15890 extracellular ligand-binding receptor 0.38 PGA1_c09880 aminopeptidase N low > 62

Not shown: 8 genomes with orthologs for HER17_RS00495 only; 17 genomes with orthologs for HER17_RS12010 only