Conservation of cofitness between HER17_RS02810 and HER17_RS08735 in Pectobacterium carotovorum WPP14

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02810 peroxide stress protein YaaA 1.0 HER17_RS08735 NAD(P)/FAD-dependent oxidoreductase 0.87 4
Dickeya dadantii 3937 0.84 DDA3937_RS18400 peroxide stress protein YaaA 0.89 DDA3937_RS13040 NAD(P)/FAD-dependent oxidoreductase low > 74
Escherichia fergusonii Becca 0.82 EFB2_04037 Peroxide stress resistance protein YaaA 0.79 EFB2_02866 NADH dehydrogenase low > 86
Enterobacter sp. TBS_079 0.82 MPMX20_00714 Peroxide stress resistance protein YaaA 0.79 MPMX20_01790 NADH dehydrogenase low > 85
Escherichia coli Nissle 1917 0.82 ECOLIN_RS00035 peroxide stress protein YaaA 0.79 ECOLIN_RS06400 NADH-quinone dehydrogenase low > 55
Dickeya dianthicola ME23 0.82 DZA65_RS19470 peroxide stress protein YaaA 0.88 DZA65_RS13575 NAD(P)/FAD-dependent oxidoreductase low > 75
Escherichia coli ECOR38 0.82 HEPCGN_09095 yaaA peroxide stress protein YaaA 0.79 HEPCGN_23990 ndh NADH-quinone dehydrogenase low > 87
Escherichia coli ECRC99 0.82 KEDOAH_17065 yaaA peroxide stress protein YaaA 0.79 KEDOAH_24260 ndh NADH-quinone dehydrogenase — —
Dickeya dianthicola 67-19 0.82 HGI48_RS18330 peroxide stress protein YaaA 0.88 HGI48_RS13105 NAD(P)/FAD-dependent oxidoreductase low > 71
Escherichia coli ECRC100 0.82 OKFHMN_11090 yaaA peroxide stress protein YaaA 0.79 OKFHMN_03495 ndh NADH-quinone dehydrogenase low > 80
Escherichia coli ECRC101 0.82 MCAODC_01605 yaaA peroxide stress protein YaaA 0.79 MCAODC_22855 ndh NADH-quinone dehydrogenase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.82 OHPLBJKB_03654 hypothetical protein 0.79 OHPLBJKB_02557 NADH dehydrogenase low > 73
Escherichia coli BL21 0.82 ECD_00006 peroxide resistance protein, lowers intracellular iron 0.79 ECD_01105 respiratory NADH dehydrogenase 2/cupric reductase low > 61
Escherichia coli ECRC98 0.82 JDDGAC_14685 yaaA peroxide stress protein YaaA 0.79 JDDGAC_07155 ndh NADH-quinone dehydrogenase low > 86
Escherichia coli ECRC102 0.82 NIAGMN_08940 yaaA peroxide stress protein YaaA 0.79 NIAGMN_24335 ndh NADH-quinone dehydrogenase — —
Enterobacter asburiae PDN3 0.81 EX28DRAFT_3618 Uncharacterized protein conserved in bacteria 0.79 EX28DRAFT_1821 NADH dehydrogenase, FAD-containing subunit low > 76
Escherichia coli ECRC62 0.81 BNILDI_08185 yaaA peroxide stress protein YaaA 0.79 BNILDI_19185 ndh NADH-quinone dehydrogenase low > 75
Escherichia coli BW25113 0.81 b0006 yaaA hypothetical protein (NCBI) 0.79 b1109 ndh respiratory NADH dehydrogenase 2/cupric reductase (NCBI) low > 76
Escherichia coli ECOR27 0.81 NOLOHH_03420 yaaA peroxide stress protein YaaA 0.79 NOLOHH_21020 ndh NADH-quinone dehydrogenase low > 75
Serratia liquefaciens MT49 0.80 IAI46_03045 peroxide stress protein YaaA 0.87 IAI46_09910 NAD(P)/FAD-dependent oxidoreductase low > 86
Klebsiella michiganensis M5al 0.80 BWI76_RS04260 peroxide stress protein YaaA 0.78 BWI76_RS11175 NADH dehydrogenase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.79 GFF1081 UPF0246 protein YaaA 0.79 GFF3392 NADH dehydrogenase (EC 1.6.99.3) low > 78
Pantoea sp. MT58 0.79 IAI47_16200 peroxide stress protein YaaA 0.80 IAI47_11985 NAD(P)/FAD-dependent oxidoreductase low > 76
Erwinia tracheiphila SCR3 0.77 LU632_RS02625 yaaA peroxide stress protein YaaA 0.80 LU632_RS14740 NAD(P)/FAD-dependent oxidoreductase low > 74
Rahnella sp. WP5 0.76 EX31_RS03930 peroxide stress protein YaaA 0.84 EX31_RS24510 NAD(P)/FAD-dependent oxidoreductase low > 89
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_11930 peroxide stress protein YaaA 0.68 CSW01_09465 NAD(P)/FAD-dependent oxidoreductase 0.47 21
Marinobacter adhaerens HP15 0.69 HP15_1223 protein YaaA 0.51 HP15_3830 FAD-dependent pyridine nucleotide-disulfide oxidoreductase low > 73
Acinetobacter radioresistens SK82 0.68 MPMX26_02017 Peroxide stress resistance protein YaaA 0.37 MPMX26_01006 NADH dehydrogenase — —
Pseudomonas putida KT2440 0.67 PP_1289 conserved protein of unknown function, DUF328 family 0.56 PP_0626 NADH dehydrogenase low > 96
Pseudomonas sp. RS175 0.67 PFR28_03554 Peroxide stress resistance protein YaaA 0.53 PFR28_03740 NADH dehydrogenase low > 88
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_17320 hypothetical protein 0.53 AO356_15965 NADH dehydrogenase low > 104
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_04675 hypothetical protein 0.52 AO353_14255 NADH dehydrogenase low > 101
Pseudomonas fluorescens GW456-L13 0.66 PfGW456L13_1686 UPF0246 protein YaaA 0.52 PfGW456L13_1496 NADH dehydrogenase (EC 1.6.99.3) low > 87
Pseudomonas fluorescens FW300-N1B4 0.66 Pf1N1B4_981 UPF0246 protein YaaA 0.53 Pf1N1B4_2826 NADH dehydrogenase (EC 1.6.99.3) low > 87
Pseudomonas fluorescens FW300-N2E2 0.66 Pf6N2E2_5389 UPF0246 protein YaaA 0.53 Pf6N2E2_5132 NADH dehydrogenase (EC 1.6.99.3) low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.65 Psyr_1064 Protein of unknown function DUF328 0.53 Psyr_0790 FAD-dependent pyridine nucleotide-disulfide oxidoreductase low > 86
Pseudomonas syringae pv. syringae B728a 0.65 Psyr_1064 Protein of unknown function DUF328 0.53 Psyr_0790 FAD-dependent pyridine nucleotide-disulfide oxidoreductase low > 86
Pseudomonas simiae WCS417 0.65 PS417_04850 hypothetical protein 0.53 PS417_03855 NADH dehydrogenase low > 88
Pseudomonas stutzeri RCH2 0.64 Psest_3173 Uncharacterized protein conserved in bacteria 0.52 Psest_0715 NADH dehydrogenase, FAD-containing subunit low > 67
Shewanella loihica PV-4 0.64 Shew_1093 hypothetical protein (RefSeq) 0.54 Shew_2195 NADH dehydrogenase (RefSeq) low > 60
Pseudomonas sp. S08-1 0.64 OH686_07085 UPF0246 protein YaaA 0.52 OH686_16450 NADH dehydrogenase low > 80
Pseudomonas fluorescens SBW25 0.63 PFLU_RS04920 peroxide stress protein YaaA 0.53 PFLU_RS03905 NAD(P)/FAD-dependent oxidoreductase low > 109
Pseudomonas fluorescens SBW25-INTG 0.63 PFLU_RS04920 peroxide stress protein YaaA 0.53 PFLU_RS03905 NAD(P)/FAD-dependent oxidoreductase low > 109
Shewanella amazonensis SB2B 0.63 Sama_0917 hypothetical protein (RefSeq) 0.41 Sama_0936 NADH dehydrogenase (RefSeq) low > 62
Ralstonia sp. UNC404CL21Col 0.61 ABZR87_RS14635 peroxide stress protein YaaA 0.41 ABZR87_RS15675 NAD(P)/FAD-dependent oxidoreductase low > 80
Alteromonas macleodii MIT1002 0.60 MIT1002_03077 hypothetical protein 0.51 MIT1002_03885 NADH dehydrogenase low > 70
Ralstonia solanacearum PSI07 0.59 RPSI07_RS14595 peroxide stress protein YaaA 0.41 RPSI07_RS13485 NAD(P)/FAD-dependent oxidoreductase low > 81
Ralstonia solanacearum IBSBF1503 0.59 RALBFv3_RS02720 peroxide stress protein YaaA 0.40 RALBFv3_RS03745 NAD(P)/FAD-dependent oxidoreductase low > 76
Ralstonia solanacearum UW163 0.59 UW163_RS11005 peroxide stress protein YaaA 0.40 UW163_RS09925 NAD(P)/FAD-dependent oxidoreductase — —
Ralstonia solanacearum GMI1000 0.59 RS_RS10095 peroxide stress protein YaaA 0.40 RS_RS11190 NAD(P)/FAD-dependent oxidoreductase low > 80
Paraburkholderia graminis OAS925 0.58 ABIE53_001622 cytoplasmic iron level regulating protein YaaA (DUF328/UPF0246 family) 0.41 ABIE53_004853 NADH dehydrogenase 0.20 81
Shewanella sp. ANA-3 0.58 Shewana3_3143 hypothetical protein (RefSeq) 0.40 Shewana3_3123 FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq) low > 73
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_04599 hypothetical protein 0.41 H281DRAFT_06021 NADH dehydrogenase low > 103
Shewanella oneidensis MR-1 0.57 SO3540 conserved hypothetical protein (NCBI ptt file) 0.40 SO3517 ndh NADH dehydrogenase (NCBI ptt file) low > 76
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS06780 hypothetical protein 0.41 BPHYT_RS33605 FAD-dependent pyridine nucleotide-disulfide oxidoreductase low > 109
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS24000 peroxide stress protein YaaA 0.41 QEN71_RS17890 NAD(P)/FAD-dependent oxidoreductase low > 153
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS05780 hypothetical protein 0.48 RR42_RS26100 pyridine nucleotide-disulfide oxidoreductase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.54 GFF720 UPF0246 protein YaaA 0.36 GFF4021 NADH dehydrogenase (EC 1.6.99.3) low > 90
Acidovorax sp. GW101-3H11 0.53 Ac3H11_1593 UPF0246 protein YaaA 0.17 Ac3H11_2167 NADH dehydrogenase (EC 1.6.99.3) low > 79
Variovorax sp. SCN45 0.48 GFF6020 UPF0246 protein YaaA 0.16 GFF6814 NADH dehydrogenase (EC 1.6.99.3) low > 127
Variovorax sp. OAS795 0.47 ABID97_RS07905 peroxide stress protein YaaA 0.48 ABID97_RS26565 NAD(P)/FAD-dependent oxidoreductase — —
Castellaniella sp019104865 MT123 0.47 ABCV34_RS01170 peroxide stress protein YaaA 0.09 ABCV34_RS15045 FAD-dependent oxidoreductase low > 48
Bacteroides ovatus ATCC 8483 0.30 BACOVA_00355 hypothetical protein 0.14 BACOVA_04275 pyridine nucleotide-disulfide oxidoreductase low > 94
Phocaeicola dorei CL03T12C01 0.28 ABI39_RS02240 peroxide stress protein YaaA 0.16 ABI39_RS15145 NAD(P)/FAD-dependent oxidoreductase low > 72

Not shown: 11 genomes with orthologs for HER17_RS02810 only; 18 genomes with orthologs for HER17_RS08735 only