Conservation of cofitness between Ga0059261_2764 and Ga0059261_1625 in Sphingomonas koreensis DSMZ 15582

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingomonas koreensis DSMZ 15582 1.0 Ga0059261_2764 Site-specific recombinase XerD 1.0 Ga0059261_1625 2-keto-3-deoxy-6-phosphogluconate aldolase 0.43 2
Brevundimonas sp. GW460-12-10-14-LB2 0.48 A4249_RS12210 tyrosine recombinase XerC 0.49 A4249_RS01965 2-dehydro-3-deoxy-6-phosphogalactonate aldolase low > 48
Caulobacter crescentus NA1000 Δfur 0.47 CCNA_00349 integrase/recombinase, XerC-CodV family 0.45 CCNA_00825 2-dehydro-3-deoxy-6-phosphogalactonate aldolase low > 67
Caulobacter crescentus NA1000 0.47 CCNA_00349 integrase/recombinase, XerC-CodV family 0.45 CCNA_00825 2-dehydro-3-deoxy-6-phosphogalactonate aldolase low > 66
Dinoroseobacter shibae DFL-12 0.44 Dshi_5002 xerC hypothetical protein (NCBI) 0.44 Dshi_1241 KDPG and KHG aldolase (RefSeq) — —
Phaeobacter inhibens DSM 17395 0.44 PGA1_c05760 putative tyrosine recombinase XerC 0.38 PGA1_c07350 2-dehydro-3-deoxy-6-phosphogalactonate aldolase DgoA low > 62
Agrobacterium fabrum C58 0.43 Atu2628 site-specific recombinase 0.42 Atu0703 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase — —
Rhizobium sp. OAE497 0.42 ABIE40_RS17950 tyrosine recombinase XerC 0.38 ABIE40_RS05265 2-dehydro-3-deoxy-6-phosphogalactonate aldolase low > 107
Sinorhizobium meliloti 1021 0.42 SMc02489 site-specific tyrosine recombinase XerC 0.39 SMc00882 2-dehydro-3-deoxy-6-phosphogalactonate aldolase — —
Azospirillum brasilense Sp245 0.41 AZOBR_RS03965 tyrosine recombinase XerC 0.57 AZOBR_RS22730 2-dehydro-3-deoxy-6-phosphogalactonate aldolase — —
Azospirillum sp. SherDot2 0.40 MPMX19_02110 Tyrosine recombinase XerC 0.46 MPMX19_03916 2-dehydro-3-deoxy-6-phosphogalactonate aldolase — —
Lysobacter sp. OAE881 0.27 ABIE51_RS03035 tyrosine recombinase XerC 0.46 ABIE51_RS10930 2-dehydro-3-deoxy-6-phosphogalactonate aldolase low > 62
Paraburkholderia bryophila 376MFSha3.1 0.27 H281DRAFT_02202 integrase/recombinase XerC 0.48 H281DRAFT_06295 2-keto-3-deoxy-phosphogalactonate aldolase — —
Dyella japonica UNC79MFTsu3.2 0.27 ABZR86_RS15025 tyrosine recombinase XerC 0.37 ABZR86_RS01220 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.43 69
Burkholderia phytofirmans PsJN 0.27 BPHYT_RS01655 tyrosine recombinase XerC 0.47 BPHYT_RS16945 2-dehydro-3-deoxy-6-phosphogalactonate aldolase — —
Paraburkholderia graminis OAS925 0.27 ABIE53_000426 integrase/recombinase XerC 0.48 ABIE53_003556 2-dehydro-3-deoxyphosphogalactonate aldolase — —
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_12725 recombinase XerC 0.47 AO356_20285 2-dehydro-3-deoxy-6-phosphogalactonate aldolase low > 104
Pseudomonas fluorescens FW300-N1B4 0.26 Pf1N1B4_2171 Tyrosine recombinase XerC 0.47 Pf1N1B4_399 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) low > 87
Pseudomonas fluorescens GW456-L13 0.26 PfGW456L13_842 Tyrosine recombinase XerC 0.46 PfGW456L13_2127 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) low > 87
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_4416 Tyrosine recombinase XerC 0.47 Pf6N2E2_5976 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) low > 103
Pseudomonas sp. RS175 0.26 PFR28_04378 Tyrosine recombinase XerC 0.49 PFR28_02986 2-dehydro-3-deoxy-6-phosphogalactonate aldolase low > 88
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_0185 tyrosine recombinase XerC subunit 0.50 Psyr_1988 2-keto-3-deoxy-phosphogalactonate aldolase low > 86
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_09050 recombinase XerC 0.47 AO353_01265 2-dehydro-3-deoxy-6-phosphogalactonate aldolase low > 101
Echinicola vietnamensis KMM 6221, DSM 17526 0.26 Echvi_0827 Site-specific recombinase XerD 0.27 Echvi_3770 2-keto-3-deoxy-6-phosphogluconate aldolase low > 79
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_0185 tyrosine recombinase XerC subunit 0.50 Psyr_1988 2-keto-3-deoxy-phosphogalactonate aldolase — —
Paraburkholderia sabiae LMG 24235 0.26 QEN71_RS00355 tyrosine recombinase XerC 0.45 QEN71_RS27105 2-dehydro-3-deoxy-6-phosphogalactonate aldolase — —
Xanthomonas campestris pv. campestris strain 8004 0.25 Xcc-8004.847.1 Site-specific tyrosine recombinase 0.36 Xcc-8004.3079.1 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) — —
Pedobacter sp. GW460-11-11-14-LB5 0.25 CA265_RS02835 integrase 0.16 CA265_RS19860 2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14) (from data) low > 88
Rhodanobacter sp. FW510-T8 0.25 OKGIIK_15325 xerC tyrosine recombinase XerC 0.46 OKGIIK_12505 2-dehydro-3-deoxy-6-phosphogalactonate aldolase — —
Pantoea sp. MT58 0.25 IAI47_18400 tyrosine recombinase XerC 0.43 IAI47_00040 2-dehydro-3-deoxy-6-phosphogalactonate aldolase low > 76
Variovorax sp. SCN45 0.25 GFF4490 Site-specific tyrosine recombinase XerC 0.46 GFF6770 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) low > 127
Herbaspirillum seropedicae SmR1 0.25 HSERO_RS21475 recombinase XerC 0.48 HSERO_RS05155 2-dehydro-3-deoxy-6-phosphogalactonate aldolase low > 78
Acidovorax sp. GW101-3H11 0.24 Ac3H11_1995 Tyrosine recombinase XerC 0.40 Ac3H11_601 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) low > 79
Pseudomonas fluorescens SBW25-INTG 0.24 PFLU_RS29280 tyrosine recombinase XerC 0.49 PFLU_RS00155 2-dehydro-3-deoxy-6-phosphogalactonate aldolase low > 109
Pseudomonas fluorescens SBW25 0.24 PFLU_RS29280 tyrosine recombinase XerC 0.49 PFLU_RS00155 2-dehydro-3-deoxy-6-phosphogalactonate aldolase low > 109
Pseudomonas simiae WCS417 0.24 PS417_27595 recombinase XerC 0.49 PS417_00160 2-dehydro-3-deoxy-6-phosphogalactonate aldolase low > 88
Ralstonia solanacearum PSI07 0.24 RPSI07_RS23690 tyrosine recombinase XerC 0.43 RPSI07_RS11420 2-dehydro-3-deoxy-6-phosphogalactonate aldolase low > 81
Ralstonia solanacearum GMI1000 0.24 RS_RS00260 Tyrosine recombinase XerC 1 0.44 RS_RS13770 2-dehydro-3-deoxy-6-phosphogalactonate aldolase low > 80
Rahnella sp. WP5 0.24 EX31_RS15165 tyrosine recombinase XerC 0.44 EX31_RS10325 2-dehydro-3-deoxy-6-phosphogalactonate aldolase low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.23 GFF239 Tyrosine recombinase XerC 0.43 GFF1764 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) — —
Dickeya dianthicola 67-19 0.23 HGI48_RS20045 tyrosine recombinase XerC 0.45 HGI48_RS06935 2-dehydro-3-deoxy-6-phosphogalactonate aldolase low > 71
Variovorax sp. OAS795 0.23 ABID97_RS06150 tyrosine recombinase XerC 0.51 ABID97_RS21215 2-dehydro-3-deoxy-6-phosphogalactonate aldolase low > 91
Dickeya dianthicola ME23 0.23 DZA65_RS21090 tyrosine recombinase XerC 0.46 DZA65_RS07280 2-dehydro-3-deoxy-6-phosphogalactonate aldolase low > 75
Escherichia coli BL21 0.23 ECD_03687 site-specific tyrosine recombinase 0.47 ECD_03722 hypothetical protein low > 61
Klebsiella michiganensis M5al 0.23 BWI76_RS01210 tyrosine recombinase XerC 0.44 BWI76_RS27940 2-dehydro-3-deoxy-6-phosphogalactonate aldolase low > 92
Enterobacter asburiae PDN3 0.23 EX28DRAFT_4480 tyrosine recombinase XerC 0.45 EX28DRAFT_3980 2-keto-3-deoxy-6-phosphogluconate aldolase — —
Escherichia coli ECOR27 0.23 NOLOHH_06550 xerC tyrosine recombinase XerC 0.45 NOLOHH_07205 dgoA 2-dehydro-3-deoxy-6-phosphogalactonate aldolase low > 75
Escherichia coli Nissle 1917 0.23 ECOLIN_RS21875 tyrosine recombinase XerC 0.48 ECOLIN_RS22095 2-dehydro-3-deoxy-6-phosphogalactonate aldolase low > 55
Escherichia coli ECOR38 0.23 HEPCGN_13125 xerC tyrosine recombinase XerC 0.43 HEPCGN_13770 dgoA 2-dehydro-3-deoxy-6-phosphogalactonate aldolase low > 87
Escherichia coli ECRC62 0.23 BNILDI_04985 xerC tyrosine recombinase XerC 0.45 BNILDI_04325 dgoA 2-dehydro-3-deoxy-6-phosphogalactonate aldolase low > 75
Escherichia fergusonii Becca 0.23 EFB2_04826 Tyrosine recombinase XerC 0.49 EFB2_04786 2-dehydro-3-deoxy-6-phosphogalactonate aldolase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_04239 Tyrosine recombinase XerC 0.44 OHPLBJKB_00010 2-dehydro-3-deoxy-6-phosphogalactonate aldolase low > 73
Escherichia coli BW25113 0.23 b3811 xerC site-specific tyrosine recombinase XerC (NCBI) 0.44 b4477 dgoA 2-dehydro-3-deoxy-6-phosphogalactonate aldolase (NCBI) low > 76
Ralstonia sp. UNC404CL21Col 0.22 ABZR87_RS05065 tyrosine recombinase XerC 0.44 ABZR87_RS01450 2-dehydro-3-deoxy-6-phosphogalactonate aldolase low > 80
Pontibacter actiniarum KMM 6156, DSM 19842 0.22 CA264_19035 integrase 0.20 CA264_14015 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase — —

Not shown: 38 genomes with orthologs for Ga0059261_2764 only; 2 genomes with orthologs for Ga0059261_1625 only