Conservation of cofitness between GFF517 and GFF827 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF517 Oligopeptidase A (EC 3.4.24.70) 1.0 GFF827 HflK protein 0.56 4
Escherichia coli HS(pFamp)R (ATCC 700891) 0.94 OHPLBJKB_00205 Oligopeptidase A 0.82 OHPLBJKB_03868 Modulator of FtsH protease HflK low > 73
Escherichia coli BW25113 0.94 b3498 prlC oligopeptidase A (NCBI) 0.82 b4174 hflK modulator for HflB protease specific for phage lambda cII repressor (NCBI) 0.35 5
Escherichia coli ECOR38 0.94 HEPCGN_15325 prlC oligopeptidase A 0.82 HEPCGN_10475 hflK FtsH protease activity modulator HflK low > 85
Escherichia fergusonii Becca 0.94 EFB2_00317 Oligopeptidase A 0.85 EFB2_04361 Modulator of FtsH protease HflK low > 86
Escherichia coli ECRC101 0.94 MCAODC_06930 prlC oligopeptidase A 0.82 MCAODC_02760 hflK FtsH protease activity modulator HflK — —
Escherichia coli ECRC101 0.94 OKFHMN_16415 prlC oligopeptidase A 0.82 OKFHMN_12245 hflK FtsH protease activity modulator HflK — —
Escherichia coli ECRC102 0.94 NIAGMN_14180 prlC oligopeptidase A 0.82 NIAGMN_10095 hflK FtsH protease activity modulator HflK — —
Escherichia coli ECRC99 0.94 KEDOAH_11730 prlC oligopeptidase A 0.82 KEDOAH_15910 hflK FtsH protease activity modulator HflK — —
Escherichia coli ECRC98 0.94 JDDGAC_20045 prlC oligopeptidase A 0.82 JDDGAC_15885 hflK FtsH protease activity modulator HflK — —
Escherichia coli Nissle 1917 0.94 ECOLIN_RS19985 oligopeptidase A 0.82 ECOLIN_RS24240 FtsH protease activity modulator HflK — —
Escherichia coli ECRC62 0.93 BNILDI_03210 prlC oligopeptidase A 0.82 BNILDI_06980 hflK FtsH protease activity modulator HflK — —
Enterobacter asburiae PDN3 0.93 EX28DRAFT_4063 Zn-dependent oligopeptidases 0.81 EX28DRAFT_3371 HflK protein low > 76
Escherichia coli ECOR27 0.93 NOLOHH_08350 prlC oligopeptidase A 0.82 NOLOHH_04510 hflK FtsH protease activity modulator HflK low > 57
Escherichia coli BL21 0.93 ECD_03347 oligopeptidase A 0.82 ECD_04041 modulator for HflB protease specific for phage lambda cII repressor low > 60
Enterobacter sp. TBS_079 0.93 MPMX20_04397 Oligopeptidase A 0.75 MPMX20_00455 Modulator of FtsH protease HflK 0.21 78
Klebsiella michiganensis M5al 0.92 BWI76_RS26610 oligopeptidase A 0.74 BWI76_RS02545 protease modulator HflK 0.30 14
Pantoea sp. MT58 0.87 IAI47_01345 oligopeptidase A 0.66 IAI47_02600 FtsH protease activity modulator HflK low > 76
Erwinia tracheiphila SCR3 0.86 LU632_RS19470 prlC oligopeptidase A 0.67 LU632_RS02065 hflK FtsH protease activity modulator HflK 0.67 69
Pectobacterium carotovorum WPP14 0.85 HER17_RS21300 oligopeptidase A 0.70 HER17_RS02595 FtsH protease activity modulator HflK low > 75
Dickeya dianthicola ME23 0.83 DZA65_RS00035 oligopeptidase A 0.69 DZA65_RS19670 FtsH protease activity modulator HflK low > 75
Dickeya dadantii 3937 0.83 DDA3937_RS21265 oligopeptidase A 0.68 DDA3937_RS18600 FtsH protease activity modulator HflK low > 74
Serratia liquefaciens MT49 0.83 IAI46_24210 oligopeptidase A 0.68 IAI46_01635 FtsH protease activity modulator HflK 0.86 1
Dickeya dianthicola 67-19 0.82 HGI48_RS00045 oligopeptidase A 0.69 HGI48_RS18535 FtsH protease activity modulator HflK low > 71
Rahnella sp. WP5 0.82 EX31_RS05165 oligopeptidase A 0.63 EX31_RS08810 FtsH protease activity modulator HflK low > 89
Vibrio cholerae E7946 ATCC 55056 0.72 CSW01_01010 oligopeptidase A 0.46 CSW01_01845 protease modulator HflK low > 62
Shewanella loihica PV-4 0.67 Shew_3657 oligopeptidase A (RefSeq) 0.45 Shew_0568 HflK protein (RefSeq) low > 60
Shewanella oneidensis MR-1 0.65 SO4699 prlC oligopeptidase A (NCBI ptt file) 0.45 SO0605 hflK hflK protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.65 Shewana3_4051 oligopeptidase A (RefSeq) 0.46 Shewana3_0599 HflK protein (RefSeq) low > 73
Shewanella amazonensis SB2B 0.65 Sama_3546 oligopeptidase A (RefSeq) 0.46 Sama_3023 hflK protein (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.64 MIT1002_03633 Oligopeptidase A 0.45 MIT1002_03786 Modulator of FtsH protease HflK low > 70
Kangiella aquimarina DSM 16071 0.59 B158DRAFT_0457 Zn-dependent oligopeptidases 0.29 B158DRAFT_1954 protease FtsH subunit HflK low > 40
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A 0.34 Psyr_0574 protease FtsH subunit HflK low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A 0.34 Psyr_0574 protease FtsH subunit HflK low > 86
Pseudomonas sp. RS175 0.57 PFR28_04699 Oligopeptidase A 0.35 PFR28_05123 Modulator of FtsH protease HflK low > 88
Marinobacter adhaerens HP15 0.57 HP15_3759 oligopeptidase A-like protein 0.33 HP15_2497 HflK low > 73
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_4091 Oligopeptidase A (EC 3.4.24.70) 0.33 Pf6N2E2_3612 HflK protein 0.26 26
Pseudomonas putida KT2440 0.57 PP_0096 oligopeptidase A 0.33 PP_4892 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex low > 96
Pseudomonas simiae WCS417 0.57 PS417_00245 oligopeptidase A 0.34 PS417_02500 membrane protein — —
Pseudomonas fluorescens FW300-N2C3 0.57 AO356_11120 oligopeptidase A 0.35 AO356_08645 hypothetical protein low > 104
Pseudomonas stutzeri RCH2 0.57 Psest_4320 Zn-dependent oligopeptidases 0.33 Psest_0685 HflK protein — —
Pseudomonas fluorescens SBW25 0.57 PFLU_RS00240 oligopeptidase A 0.35 PFLU_RS02580 FtsH protease activity modulator HflK 0.46 100
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS00240 oligopeptidase A 0.35 PFLU_RS02580 FtsH protease activity modulator HflK 0.21 109
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_1844 Oligopeptidase A (EC 3.4.24.70) 0.36 Pf1N1B4_1410 HflK protein — —
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_624 Oligopeptidase A (EC 3.4.24.70) 0.33 PfGW456L13_152 HflK protein low > 87
Pseudomonas sp. S08-1 0.56 OH686_12360 Oligopeptidase A 0.32 OH686_09460 HflK protein low > 80
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_10775 oligopeptidase A 0.35 AO353_13155 hypothetical protein low > 101
Rhodanobacter sp. FW510-T8 0.50 OKGIIK_15380 dcp oligopeptidase A 0.27 OKGIIK_06640 hflK FtsH protease activity modulator HflK low > 52
Dyella japonica UNC79MFTsu3.2 0.49 ABZR86_RS14940 M3 family metallopeptidase 0.25 ABZR86_RS08355 FtsH protease activity modulator HflK low > 74
Dechlorosoma suillum PS 0.49 Dsui_0046 Zn-dependent oligopeptidase 0.32 Dsui_3135 HflK protein — —
Rhodanobacter denitrificans FW104-10B01 0.48 LRK54_RS08615 M3 family metallopeptidase 0.27 LRK54_RS00620 FtsH protease activity modulator HflK low > 59
Rhodanobacter denitrificans MT42 0.48 LRK55_RS08380 M3 family metallopeptidase 0.27 LRK55_RS00390 FtsH protease activity modulator HflK low > 63
Ralstonia solanacearum GMI1000 0.47 RS_RS08035 oligopeptidase A 0.27 RS_RS06120 FtsH protease activity modulator HflK low > 80
Ralstonia solanacearum UW163 0.47 UW163_RS15000 oligopeptidase A 0.29 UW163_RS12775 FtsH protease activity modulator HflK — —
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS01690 oligopeptidase A 0.29 RALBFv3_RS15310 FtsH protease activity modulator HflK low > 76
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS13490 M3 family metallopeptidase 0.29 ABZR87_RS10950 FtsH protease activity modulator HflK low > 80
Ralstonia solanacearum PSI07 0.46 RPSI07_RS15795 oligopeptidase A 0.29 RPSI07_RS18065 FtsH protease activity modulator HflK low > 81
Variovorax sp. OAS795 0.45 ABID97_RS14080 M3 family metallopeptidase 0.27 ABID97_RS14260 FtsH protease activity modulator HflK low > 91
Variovorax sp. SCN45 0.45 GFF963 Oligopeptidase A (EC 3.4.24.70) 0.27 GFF1002 HflK protein low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.44 GFF4214 Oligopeptidase A (EC 3.4.24.70) 0.28 GFF4856 HflK protein low > 90
Acidovorax sp. GW101-3H11 0.44 Ac3H11_4097 Oligopeptidase A (EC 3.4.24.70) 0.27 Ac3H11_1801 HflK protein low > 79
Castellaniella sp019104865 MT123 0.43 ABCV34_RS04180 M3 family metallopeptidase 0.29 ABCV34_RS02660 FtsH protease activity modulator HflK — —

Not shown: 14 genomes with orthologs for GFF517 only; 5 genomes with orthologs for GFF827 only