Conservation of cofitness between GFF2804 and GFF743 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

73 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF2804 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 1.0 GFF743 Uncharacterized glutathione S-transferase-like protein 0.48 7
Escherichia coli Nissle 1917 0.91 ECOLIN_RS07185 D-amino acid dehydrogenase 0.81 ECOLIN_RS04455 glutathione S-transferase GstB — —
Escherichia coli ECOR38 0.91 HEPCGN_24750 dadA D-amino acid dehydrogenase 0.81 HEPCGN_01985 gstB glutathione S-transferase GstB low > 88
Escherichia fergusonii Becca 0.91 EFB2_02743 D-amino acid dehydrogenase 0.81 EFB2_03268 Glutathione S-transferase GstB low > 86
Escherichia coli BW25113 0.91 b1189 dadA D-amino acid dehydrogenase (quinone) DadA (EC 1.4.5.1) (from data) 0.81 b0838 yliJ putative transferase (VIMSS) low > 76
Escherichia coli ECOR27 0.91 NOLOHH_20725 dadA D-amino acid dehydrogenase 0.81 NOLOHH_22415 gstB glutathione S-transferase GstB low > 76
Escherichia coli ECRC98 0.91 JDDGAC_06220 dadA D-amino acid dehydrogenase 0.81 JDDGAC_09680 gstB glutathione S-transferase GstB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.91 OHPLBJKB_02500 D-amino acid dehydrogenase 0.80 OHPLBJKB_02872 Glutathione S-transferase GstB low > 74
Escherichia coli ECRC100 0.91 OKFHMN_28290 dadA D-amino acid dehydrogenase 0.81 OKFHMN_06045 gstB glutathione S-transferase GstB — —
Escherichia coli BL21 0.91 ECD_01164 D-amino acid dehydrogenase 0.81 ECD_00805 glutathione S-transferase — —
Escherichia coli ECRC101 0.91 MCAODC_21880 dadA D-amino acid dehydrogenase 0.81 MCAODC_25260 gstB glutathione S-transferase GstB low > 87
Escherichia coli ECRC99 0.91 KEDOAH_25305 dadA D-amino acid dehydrogenase 0.81 KEDOAH_21865 gstB glutathione S-transferase GstB — —
Escherichia coli ECRC62 0.91 BNILDI_18890 dadA D-amino acid dehydrogenase 0.81 BNILDI_20675 gstB glutathione S-transferase GstB low > 75
Escherichia coli ECRC102 0.91 NIAGMN_27930 dadA D-amino acid dehydrogenase 0.81 NIAGMN_04090 gstB glutathione S-transferase GstB low > 80
Enterobacter sp. TBS_079 0.91 MPMX20_02699 D-amino acid dehydrogenase 0.80 MPMX20_01476 Glutathione S-transferase GstB low > 85
Enterobacter asburiae PDN3 0.91 EX28DRAFT_0766 Glycine/D-amino acid oxidases (deaminating) 0.80 EX28DRAFT_2128 Glutathione S-transferase low > 76
Klebsiella michiganensis M5al 0.90 BWI76_RS17735 D-amino acid dehydrogenase small subunit 0.78 BWI76_RS09140 glutathione S-transferase low > 92
Klebsiella pneumoniae MKP103 0.90 KDGMDA_25050 D-amino acid dehydrogenase 0.76 KDGMDA_17395 glutathione S-transferase low > 95
Rahnella sp. WP5 0.81 EX31_RS10485 D-amino acid dehydrogenase 0.36 EX31_RS17750 glutathione S-transferase family protein low > 89
Serratia liquefaciens MT49 0.80 IAI46_14460 D-amino acid dehydrogenase 0.52 IAI46_08260 glutathione S-transferase low > 87
Pantoea sp. MT58 0.78 IAI47_08890 D-amino acid dehydrogenase 0.29 IAI47_01080 glutathione S-transferase low > 76
Pantoea agglomerans CFBP13505 P0401 0.78 PagCFBP13505_RS02725 D-amino acid dehydrogenase 0.30 PagCFBP13505_RS20875 glutathione S-transferase low > 74
Pectobacterium carotovorum WPP14 0.73 HER17_RS11170 D-amino acid dehydrogenase 0.59 HER17_RS12565 glutathione S-transferase low > 75
Dickeya dianthicola ME23 0.72 DZA65_RS11540 D-amino acid dehydrogenase 0.53 DZA65_RS09720 glutathione S-transferase low > 75
Dickeya dadantii 3937 0.71 DDA3937_RS11170 D-amino acid dehydrogenase 0.55 DDA3937_RS09395 glutathione S-transferase low > 74
Dickeya dianthicola 67-19 0.71 HGI48_RS11195 D-amino acid dehydrogenase 0.53 HGI48_RS09410 glutathione S-transferase low > 71
Paraburkholderia bryophila 376MFSha3.1 0.70 H281DRAFT_04287 D-amino-acid dehydrogenase 0.43 H281DRAFT_05346 Glutathione S-transferase low > 103
Paraburkholderia sabiae LMG 24235 0.70 QEN71_RS04190 D-amino acid dehydrogenase 0.40 QEN71_RS07955 glutathione S-transferase low > 153
Burkholderia phytofirmans PsJN 0.70 BPHYT_RS14790 D-amino acid dehydrogenase 0.43 BPHYT_RS24305 glutathione S-transferase low > 109
Paraburkholderia graminis OAS925 0.70 ABIE53_003133 D-amino-acid dehydrogenase 0.43 ABIE53_006479 glutathione S-transferase low > 113
Ralstonia sp. UNC404CL21Col 0.68 ABZR87_RS09560 D-amino acid dehydrogenase 0.39 ABZR87_RS09810 glutathione S-transferase low > 80
Ralstonia solanacearum UW163 0.68 UW163_RS15940 D-amino acid dehydrogenase small subunit 0.39 UW163_RS15720 glutathione S-transferase — —
Ralstonia solanacearum IBSBF1503 0.68 RALBFv3_RS13870 D-amino acid dehydrogenase small subunit 0.39 RALBFv3_RS14090 glutathione S-transferase low > 76
Herbaspirillum seropedicae SmR1 0.68 HSERO_RS08375 D-amino acid dehydrogenase small subunit 0.28 HSERO_RS22830 glutathione S-transferase low > 78
Ralstonia solanacearum GMI1000 0.68 RS_RS04605 D-amino acid dehydrogenase small subunit 0.38 RS_RS04870 glutathione S-transferase low > 80
Ralstonia solanacearum PSI07 0.67 RPSI07_RS19600 D-amino acid dehydrogenase small subunit 0.38 RPSI07_RS19370 glutathione S-transferase low > 81
Cupriavidus basilensis FW507-4G11 0.66 RR42_RS04585 amino acid dehydrogenase 0.39 RR42_RS12330 glutathione S-transferase low > 128
Acinetobacter baumannii LAC-4 0.63 RR41_RS18375 D-amino acid dehydrogenase 0.25 RR41_RS10105 glutathione S-transferase low > 55
Pseudomonas aeruginosa MRSN321 0.63 DY961_RS12410 dadA;inference=COORDINATES D-amino acid dehydrogenase 0.49 DY961_RS02985 glutathione S-transferase low > 100
Pseudomonas aeruginosa PUPa3 0.63 DQ20_RS49720 dadA;inference=COORDINATES D-amino acid dehydrogenase 0.49 DQ20_RS32610 glutathione S-transferase low > 101
Pseudomonas aeruginosa PA14 0.63 IKLFDK_26930 D-amino acid dehydrogenase 0.49 IKLFDK_14235 glutathione S-transferase low > 98
Rhodanobacter denitrificans MT42 0.62 LRK55_RS00360 D-amino acid dehydrogenase 0.20 LRK55_RS01830 glutathione S-transferase family protein low > 63
Rhodanobacter sp. FW510-T8 0.62 OKGIIK_06665 dadA D-amino acid dehydrogenase small subunit 0.20 OKGIIK_09120 gstA glutathione S-transferase low > 53
Rhodanobacter denitrificans FW104-10B01 0.62 LRK54_RS00590 D-amino acid dehydrogenase 0.20 LRK54_RS02055 glutathione S-transferase family protein low > 59
Rhodanobacter sp000427505 FW510-R12 0.61 LRK53_RS09560 D-amino acid dehydrogenase 0.22 LRK53_RS07990 glutathione S-transferase family protein low > 59
Variovorax sp. OAS795 0.61 ABID97_RS22385 D-amino acid dehydrogenase 0.39 ABID97_RS05605 glutathione S-transferase low > 91
Pseudomonas orientalis W4I3 0.61 QF045_RS02055 D-amino acid dehydrogenase 0.45 QF045_RS11865 glutathione S-transferase low > 93
Pseudomonas putida KT2440 0.61 PP_4434 D-amino acid dehydrogenase 1 small subunit 0.45 PP_1894 glutathione S-transferase reducing arsenate to arsenite low > 96
Pseudomonas fluorescens FW300-N1B4 0.61 Pf1N1B4_2144 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.42 Pf1N1B4_477 Uncharacterized glutathione S-transferase-like protein low > 87
Pseudomonas sp. DMC3 0.61 GFF390 D-amino acid dehydrogenase 1 0.45 GFF4782 Glutathione S-transferase GstB low > 89
Pseudomonas fluorescens FW300-N2E3 0.61 AO353_09155 amino acid dehydrogenase 0.46 AO353_01490 glutathione S-transferase low > 101
Pseudomonas simiae WCS417 0.61 PS417_27705 amino acid dehydrogenase 0.44 PS417_09195 glutathione S-transferase low > 88
Pseudomonas fluorescens FW300-N2E2 0.61 Pf6N2E2_4391 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.47 Pf6N2E2_5926 Uncharacterized glutathione S-transferase-like protein low > 103
Pseudomonas lactucae CFBP13502 0.61 GEMAOFIL_00008 D-amino acid dehydrogenase 1 0.45 GEMAOFIL_01962 Glutathione S-transferase GstB low > 96
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_0235 D-amino acid dehydrogenase small subunit 0.46 Psyr_1629 Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal low > 86
Pseudomonas fluorescens SBW25 0.60 PFLU_RS29380 D-amino acid dehydrogenase 0.44 PFLU_RS09205 glutathione S-transferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.60 PFLU_RS29380 D-amino acid dehydrogenase 0.44 PFLU_RS09205 glutathione S-transferase low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_0235 D-amino acid dehydrogenase small subunit 0.46 Psyr_1629 Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal low > 86
Pseudomonas fluorescens GW456-L13 0.60 PfGW456L13_812 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.47 PfGW456L13_2079 Uncharacterized glutathione S-transferase-like protein low > 87
Pseudomonas sp. BP01 0.60 JOY50_RS09125 dadA D-amino acid dehydrogenase 0.46 JOY50_RS16895 glutathione S-transferase low > 84
Pseudomonas fluorescens FW300-N2C3 0.60 AO356_12620 amino acid dehydrogenase 0.46 AO356_20040 glutathione S-transferase low > 104
Pseudomonas sp. SVBP6 0.60 COO64_RS01395 dadA D-amino acid dehydrogenase 0.48 COO64_RS05910 glutathione S-transferase low > 93
Variovorax sp. SCN45 0.60 GFF1773 D-amino acid dehydrogenase (EC 1.4.99.6) 0.39 GFF6892 Uncharacterized glutathione S-transferase-like protein low > 127
Pseudomonas sp. RS175 0.60 PFR28_04399 D-amino acid dehydrogenase 1 0.47 PFR28_03035 Glutathione S-transferase GstB low > 88
Agrobacterium fabrum C58 0.56 Atu3293 D-amino acid dehydrogenase small subunit 0.14 Atu1871 glutathione S-transferase low > 89
Xanthobacter sp. DMC5 0.55 GFF1413 D-amino acid dehydrogenase 1 0.36 GFF198 Glutathione S-transferase GstB — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.35 GFF1973 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.34 GFF1753 Uncharacterized glutathione S-transferase-like protein low > 90
Acidovorax sp. GW101-3H11 0.34 Ac3H11_832 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.40 Ac3H11_1357 Uncharacterized glutathione S-transferase-like protein low > 79
Sinorhizobium meliloti 1021 0.15 SM_b20267 D-amino acid dehydrogenase 0.17 SMc00097 glutathione S-transferase 0.36 7
Rhizobium sp. OAE497 0.14 ABIE40_RS03380 FAD-binding oxidoreductase 0.18 ABIE40_RS10295 glutathione S-transferase family protein low > 107
Shewanella amazonensis SB2B 0.13 Sama_1533 D-amino-acid dehydrogenase (RefSeq) 0.19 Sama_2509 glutathione S-transferase-like protein (RefSeq) low > 62
Bosea sp. OAE506 0.12 ABIE41_RS05730 FAD-dependent oxidoreductase 0.39 ABIE41_RS14735 glutathione S-transferase low > 77
Shewanella loihica PV-4 0.11 Shew_2360 D-hydroxyproline dehydrogenase (from data) 0.16 Shew_2968 glutathione S-transferase domain-containing protein (RefSeq) — —
Sphingobium sp. HT1-2 0.07 GFF1197 hypothetical protein 0.36 GFF4949 Uncharacterized glutathione S-transferase-like protein low > 95

Not shown: 25 genomes with orthologs for GFF2804 only; 2 genomes with orthologs for GFF743 only