| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Variovorax sp. SCN45 | 1.0 | GFF4682 | | Transcriptional regulator, MerR family | 1.0 | GFF6876 | | Aminotransferase, DegT/DnrJ/EryC1/StrS family | 0.46 | 20 |
| Variovorax sp. OAS795 | 0.89 | ABID97_RS20720 | | Cd(II)/Pb(II)-responsive transcriptional regulator | 0.34 | ABID97_RS02180 | | DegT/DnrJ/EryC1/StrS family aminotransferase | low | > 91 |
| Pseudomonas fluorescens GW456-L13 | 0.55 | PfGW456L13_958 | | Cd(II)/Pb(II)-responsive transcriptional regulator | 0.21 | PfGW456L13_4375 | | perosamine synthetase | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.55 | AO356_10375 | | Cd(II)/Pb(II)-responsive transcriptional regulator | 0.38 | AO356_03400 | | aminotransferase DegT | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.55 | Pf6N2E2_3947 | | Cd(II)/Pb(II)-responsive transcriptional regulator | 0.21 | Pf6N2E2_2610 | | Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase | low | > 103 |
| Pseudomonas sp. RS175 | 0.54 | PFR28_04825 | | Mercuric resistance operon regulatory protein | 0.22 | PFR28_00930 | | GDP-perosamine synthase | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.54 | Pf1N1B4_2290 | | Cd(II)/Pb(II)-responsive transcriptional regulator | 0.21 | Pf1N1B4_3586 | | DegT/DnrJ/EryC1/StrS aminotransferase | low | > 87 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.54 | Psyr_4838 | | transcriptional regulator, MerR family | 0.23 | Psyr_2689 | | DegT/DnrJ/EryC1/StrS aminotransferase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.54 | Psyr_4838 | | transcriptional regulator, MerR family | 0.23 | Psyr_2689 | | DegT/DnrJ/EryC1/StrS aminotransferase | low | > 86 |
| Pseudomonas fluorescens SBW25 | 0.53 | PFLU_RS28620 | | Cd(II)/Pb(II)-responsive transcriptional regulator | 0.23 | PFLU_RS08185 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.53 | PFLU_RS28620 | | Cd(II)/Pb(II)-responsive transcriptional regulator | 0.23 | PFLU_RS08185 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.53 | AO353_08425 | | Cd(II)/Pb(II)-responsive transcriptional regulator | 0.23 | AO353_25530 | | UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase | low | > 101 |
| Herbaspirillum seropedicae SmR1 | 0.49 | HSERO_RS08005 | | Pb-specific transcription regulator protein | 0.36 | HSERO_RS20990 | | aminotransferase DegT | low | > 78 |
| Paraburkholderia graminis OAS925 | 0.49 | ABIE53_000366 | | Cd(II)/Pb(II)-responsive transcriptional regulator | 0.21 | ABIE53_002021 | | dTDP-4-amino-4,6-dideoxygalactose transaminase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.49 | H281DRAFT_02296 | | transcriptional regulator, MerR family | 0.44 | H281DRAFT_04834 | | dTDP-4-amino-4,6-dideoxygalactose transaminase | — | — |
| Rhodanobacter denitrificans MT42 | 0.47 | LRK55_RS16990 | | Cd(II)/Pb(II)-responsive transcriptional regulator | 0.44 | LRK55_RS04940 | | DegT/DnrJ/EryC1/StrS family aminotransferase | low | > 63 |
| Dickeya dianthicola 67-19 | 0.46 | HGI48_RS02580 | | Cd(II)/Pb(II)-responsive transcriptional regulator | 0.23 | HGI48_RS21625 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 71 |
| Dickeya dadantii 3937 | 0.46 | DDA3937_RS02550 | | Cd(II)/Pb(II)-responsive transcriptional regulator | 0.24 | DDA3937_RS21390 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 74 |
| Shewanella sp. ANA-3 | 0.46 | Shewana3_4323 | | MerR family transcriptional regulator (RefSeq) | 0.20 | Shewana3_1303 | | polysaccharide biosynthesis protein (RefSeq) | low | > 73 |
| Dickeya dianthicola ME23 | 0.46 | DZA65_RS02685 | | Cd(II)/Pb(II)-responsive transcriptional regulator | 0.23 | DZA65_RS22610 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 75 |
| Castellaniella sp019104865 MT123 | 0.45 | ABCV34_RS08940 | | Cd(II)/Pb(II)-responsive transcriptional regulator | 0.40 | ABCV34_RS12945 | | DegT/DnrJ/EryC1/StrS family aminotransferase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.43 | ABZR87_RS22375 | | Cd(II)/Pb(II)-responsive transcriptional regulator | 0.23 | ABZR87_RS08725 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | low | > 80 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.41 | GFF5105 | | Transcriptional regulator, MerR family | 0.39 | GFF1844 | | Aminotransferase | low | > 90 |
| Acinetobacter radioresistens SK82 | 0.40 | MPMX26_03101 | | Mercuric resistance operon regulatory protein | 0.20 | MPMX26_00061 | | GDP-perosamine synthase | low | > 36 |
| Marinobacter adhaerens HP15 | 0.40 | HP15_2969 | | transcriptional regulator, MerR family | 0.21 | HP15_2398 | | aminotransferase, DegT/DnrJ/EryC1/StrS family | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.39 | RR42_RS19900 | | MerR family transcriptional regulator | 0.23 | RR42_RS15735 | | pyridoxal phosphate-dependent aminotransferase | 0.31 | 109 |
| Sphingomonas koreensis DSMZ 15582 | 0.36 | Ga0059261_3027 | | Predicted transcriptional regulators | 0.35 | Ga0059261_3110 | | Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis | — | — |
| Rhodopseudomonas palustris CGA009 | 0.33 | TX73_016860 | | helix-turn-helix domain-containing protein | 0.30 | TX73_020615 | | DegT/DnrJ/EryC1/StrS family aminotransferase | — | — |
| Azospirillum brasilense Sp245 | 0.33 | AZOBR_RS27570 | | MerR family transcriptional regulator | 0.36 | AZOBR_RS33605 | | erythromycin biosynthesis sensory transduction protein eryC1 | low | > 97 |
| Enterobacter asburiae PDN3 | 0.32 | EX28DRAFT_0035 | | Zn(II)-responsive transcriptional regulator | 0.22 | EX28DRAFT_4082 | | Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis | low | > 76 |
| Shewanella amazonensis SB2B | 0.32 | Sama_0396 | zntR | zinc-responsive transcriptional regulator (RefSeq) | 0.28 | Sama_2257 | | DegT/DnrJ/EryC1/StrS family protein (RefSeq) | low | > 62 |
| Escherichia coli ECRC62 | 0.31 | BNILDI_02220 | zntR | Zn(2+)-responsive transcriptional regulator | 0.22 | BNILDI_13535 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 0.71 | 35 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.31 | OHPLBJKB_00411 | | HTH-type transcriptional regulator ZntR | 0.22 | OHPLBJKB_01458 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | low | > 73 |
| Escherichia coli BL21 | 0.31 | ECD_03143 | | zntA gene transcriptional activator | 0.22 | ECD_02179 | | uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent | low | > 61 |
| Escherichia fergusonii Becca | 0.31 | EFB2_00531 | | HTH-type transcriptional regulator ZntR | 0.22 | EFB2_01603 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | low | > 86 |
| Escherichia coli ECRC98 | 0.31 | JDDGAC_21130 | zntR | Zn(2+)-responsive transcriptional regulator | 0.24 | JDDGAC_28540 | rfbE | GDP-perosamine synthase RfbE/PerA | low | > 86 |
| Escherichia coli ECRC102 | 0.31 | NIAGMN_15270 | zntR | Zn(2+)-responsive transcriptional regulator | 0.24 | NIAGMN_22375 | rfbE | GDP-perosamine synthase RfbE/PerA | — | — |
| Escherichia coli ECOR27 | 0.31 | NOLOHH_09300 | zntR | Zn(2+)-responsive transcriptional regulator | 0.23 | NOLOHH_14620 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 75 |
| Escherichia coli BW25113 | 0.31 | b3292 | zntR | zinc-responsive transcriptional regulator (NCBI) | 0.22 | b2253 | arnB | uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent (RefSeq) | low | > 76 |
| Escherichia coli ECRC101 | 0.31 | MCAODC_08030 | zntR | Zn(2+)-responsive transcriptional regulator | 0.24 | MCAODC_20510 | rfbE | GDP-perosamine synthase RfbE/PerA | — | — |
| Escherichia coli Nissle 1917 | 0.31 | ECOLIN_RS18895 | | Zn(2+)-responsive transcriptional regulator | 0.22 | ECOLIN_RS13125 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | — | — |
| Escherichia coli ECOR38 | 0.31 | HEPCGN_16330 | zntR | Zn(2+)-responsive transcriptional regulator | 0.22 | HEPCGN_22210 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 87 |
| Escherichia coli ECRC99 | 0.31 | KEDOAH_10640 | zntR | Zn(2+)-responsive transcriptional regulator | 0.24 | KEDOAH_03720 | rfbE | GDP-perosamine synthase RfbE/PerA | — | — |
| Enterobacter sp. TBS_079 | 0.31 | MPMX20_04200 | | HTH-type transcriptional regulator ZntR | 0.23 | MPMX20_04380 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | low | > 85 |
| Escherichia coli ECRC100 | 0.31 | OKFHMN_17500 | zntR | Zn(2+)-responsive transcriptional regulator | 0.24 | OKFHMN_24430 | rfbE | GDP-perosamine synthase RfbE/PerA | low | > 80 |
| Klebsiella michiganensis M5al | 0.31 | BWI76_RS25700 | | heavy metal-responsive transcriptional regulator | 0.24 | BWI76_RS26485 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | low | > 92 |
| Pantoea sp. MT58 | 0.30 | IAI47_02260 | | Zn(2+)-responsive transcriptional regulator | 0.22 | IAI47_21625 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 76 |
| Shewanella oneidensis MR-1 | 0.30 | SO0443 | | transcriptional regulator, MerR family (NCBI ptt file) | 0.19 | SO3270 | | polysaccharide biosynthesis protein (NCBI ptt file) | low | > 76 |
| Shewanella loihica PV-4 | 0.30 | Shew_3411 | zntR | zinc-responsive transcriptional regulator (RefSeq) | 0.19 | Shew_1319 | | DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq) | low | > 60 |
| Rahnella sp. WP5 | 0.29 | EX31_RS16005 | | Zn(2+)-responsive transcriptional regulator | 0.23 | EX31_RS14020 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 89 |
| Serratia liquefaciens MT49 | 0.28 | IAI46_23295 | | Zn(2+)-responsive transcriptional regulator | 0.24 | IAI46_11015 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 86 |
| Erwinia tracheiphila SCR3 | 0.27 | LU632_RS22515 | zntR | Zn(2+)-responsive transcriptional regulator | 0.23 | LU632_RS16495 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 74 |
| Vibrio cholerae E7946 ATCC 55056 | 0.27 | CSW01_01430 | | Zn(2+)-responsive transcriptional regulator | 0.23 | CSW01_01285 | | perosamine synthetase | low | > 62 |
Not shown: 10 genomes with orthologs for GFF4682 only; 28 genomes with orthologs for GFF6876 only