Conservation of cofitness between PS417_20030 and PS417_03310 in Pseudomonas simiae WCS417

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_20030 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1.0 PS417_03310 carbonate dehydratase 0.22 14
Pseudomonas fluorescens SBW25-INTG 0.87 PFLU_RS21995 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1.00 PFLU_RS03405 carbonate dehydratase low > 109
Pseudomonas fluorescens SBW25 0.87 PFLU_RS21995 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1.00 PFLU_RS03405 carbonate dehydratase low > 109
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_02605 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.95 AO353_14595 carbonate dehydratase low > 101
Pseudomonas fluorescens FW300-N1B4 0.83 Pf1N1B4_3713 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) 0.95 Pf1N1B4_2893 Carbonic anhydrase (EC 4.2.1.1) low > 87
Pseudomonas fluorescens GW456-L13 0.83 PfGW456L13_4236 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) 0.93 PfGW456L13_1553 Carbonic anhydrase (EC 4.2.1.1) low > 87
Pseudomonas fluorescens FW300-N2E2 0.79 Pf6N2E2_5744 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) 0.94 Pf6N2E2_5190 Carbonic anhydrase (EC 4.2.1.1) — —
Pseudomonas syringae pv. syringae B728a 0.77 Psyr_3674 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase 0.96 Psyr_0859 Carbonate dehydratase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.77 Psyr_3674 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase 0.96 Psyr_0859 Carbonate dehydratase — —
Pseudomonas fluorescens FW300-N2C3 0.76 AO356_19170 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.95 AO356_16270 carbonate dehydratase low > 104
Pseudomonas sp. RS175 0.76 PFR28_03202 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.95 PFR28_03679 Carbonic anhydrase 2 low > 88
Pseudomonas stutzeri RCH2 0.55 Psest_3006 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.83 Psest_1062 Carbonic anhydrase low > 67
Pseudomonas sp. S08-1 0.54 OH686_04955 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.87 OH686_08030 Carbonic anhydrase, beta class low > 80
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_05510 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.55 OKGIIK_09635 can carbonate dehydratase — —
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.1398.1 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) 0.58 Xcc-8004.3324.1 Carbonic anhydrase (EC 4.2.1.1) low > 74
Dyella japonica UNC79MFTsu3.2 0.49 ABZR86_RS10890 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.58 ABZR86_RS08905 carbonate dehydratase low > 74
Lysobacter sp. OAE881 0.49 ABIE51_RS04975 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.56 ABIE51_RS12660 carbonate dehydratase — —
Ralstonia solanacearum UW163 0.38 UW163_RS09190 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.57 UW163_RS03060 carbonate dehydratase — —
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS04480 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.57 RALBFv3_RS10520 carbonate dehydratase low > 76
Ralstonia solanacearum PSI07 0.38 RPSI07_RS12890 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.58 RPSI07_RS22795 carbonate dehydratase — —
Shewanella sp. ANA-3 0.37 Shewana3_3278 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (RefSeq) 0.60 Shewana3_1909 carbonic anhydrase (RefSeq) low > 73
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS16120 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.54 RR42_RS00880 carbonate dehydratase — —
Shewanella amazonensis SB2B 0.35 Sama_0762 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (RefSeq) 0.58 Sama_1642 carbonate dehydratase (RefSeq) low > 62
Dechlorosoma suillum PS 0.35 Dsui_0472 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.55 Dsui_0798 carbonic anhydrase low > 51
Shewanella oneidensis MR-1 0.35 SO1035 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (NCBI ptt file) 0.59 SO2474 carbonic anhydrase family protein (NCBI ptt file) low > 76
Acidovorax sp. GW101-3H11 0.34 Ac3H11_1000 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) 0.50 Ac3H11_2992 Carbonic anhydrase (EC 4.2.1.1) low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.34 GFF3999 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) 0.57 GFF1724 Carbonic anhydrase (EC 4.2.1.1) — —
Ralstonia solanacearum GMI1000 0.34 RS_RS12035 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.57 RS_RS01360 carbonate dehydratase — —
Shewanella loihica PV-4 0.33 Shew_0714 cobT nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferase (RefSeq) 0.58 Shew_1859 carbonate dehydratase (RefSeq) low > 60
Variovorax sp. SCN45 0.32 GFF425 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) 0.52 GFF1991 Carbonic anhydrase, beta class (EC 4.2.1.1) — —
Ralstonia sp. UNC404CL21Col 0.32 ABZR87_RS00075 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.57 ABZR87_RS06310 carbonate dehydratase low > 80
Vibrio cholerae E7946 ATCC 55056 0.29 CSW01_06260 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.56 CSW01_03110 carbonate dehydratase low > 62
Rahnella sp. WP5 0.29 EX31_RS09920 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.57 EX31_RS03305 carbonate dehydratase low > 89
Escherichia coli ECRC101 0.28 MCAODC_20255 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.57 MCAODC_00955 can carbonate dehydratase — —
Escherichia coli ECRC101 0.28 OKFHMN_25135 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.57 OKFHMN_10440 can carbonate dehydratase — —
Escherichia coli ECRC99 0.28 KEDOAH_02975 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.57 KEDOAH_17715 can carbonate dehydratase — —
Escherichia coli ECRC102 0.28 NIAGMN_22640 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.57 NIAGMN_08290 can carbonate dehydratase — —
Escherichia coli ECRC62 0.28 BNILDI_14875 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.57 BNILDI_08885 can carbonate dehydratase — —
Magnetospirillum magneticum AMB-1 0.28 AMB_RS02805 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.55 AMB_RS21440 carbonate dehydratase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.28 OHPLBJKB_01717 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.57 OHPLBJKB_03535 Carbonic anhydrase 2 — —
Escherichia coli ECOR27 0.28 NOLOHH_16045 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.57 NOLOHH_02785 can carbonate dehydratase — —
Escherichia coli BL21 0.28 ECD_01900 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.57 ECD_00125 carbonic anhydrase — —
Escherichia coli BW25113 0.28 b1991 cobT nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferase (NCBI) 0.57 b0126 can carbonic anhydrase (NCBI) — —
Escherichia coli ECRC98 0.28 JDDGAC_29265 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.57 JDDGAC_14035 can carbonate dehydratase — —
Escherichia coli ECOR38 0.28 HEPCGN_03470 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.58 HEPCGN_08420 can carbonate dehydratase — —
Escherichia fergusonii Becca 0.28 EFB2_01898 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.57 EFB2_03919 Carbonic anhydrase 2 — —
Escherichia coli Nissle 1917 0.28 ECOLIN_RS11620 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.57 ECOLIN_RS00700 carbonate dehydratase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.28 GFF3969 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) 0.55 GFF102 Carbonic anhydrase (EC 4.2.1.1) — —
Klebsiella michiganensis M5al 0.27 BWI76_RS23000 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.58 BWI76_RS04960 carbonate dehydratase low > 92
Mycobacterium tuberculosis H37Rv 0.26 Rv2207 Probable nicotinate-nucleotide-dimethylbenzimidazol phosphoribosyltransferase CobT 0.16 Rv3588c Beta-carbonic anhydrase CanB — —
Rhodospirillum rubrum S1H 0.25 Rru_A0667 Nicotinate-nucleotide-dimethylbenzimidazolephosphoribosyltransferase (NCBI) 0.54 Rru_A2056 Carbonate dehydratase (NCBI) — —
Caulobacter crescentus NA1000 Δfur 0.09 CCNA_01367 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.53 CCNA_03684 carbonic anhydrase low > 67
Caulobacter crescentus NA1000 0.09 CCNA_01367 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.53 CCNA_03684 carbonic anhydrase low > 66

Not shown: 26 genomes with orthologs for PS417_20030 only; 16 genomes with orthologs for PS417_03310 only