Conservation of cofitness between GFF1973 and GFF5493 in Hydrogenophaga sp. GW460-11-11-14-LB1

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF1973 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 1.0 GFF5493 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) 0.77 8
Acidovorax sp. GW101-3H11 0.72 Ac3H11_4848 D-alanine dehydrogenase (EC 1.4.99.-) (from data) 0.47 Ac3H11_2076 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) low > 79
Marinobacter adhaerens HP15 0.46 HP15_2610 D-amino acid dehydrogenase small subunit 0.45 HP15_2179 glucose-6-phosphate 1-dehydrogenase low > 73
Variovorax sp. SCN45 0.45 GFF6883 D-amino acid dehydrogenase (EC 1.4.99.6) 0.47 GFF5261 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) low > 127
Variovorax sp. OAS795 0.45 ABID97_RS05655 D-amino acid dehydrogenase 0.47 ABID97_RS07065 glucose-6-phosphate dehydrogenase low > 91
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS07275 D-amino acid dehydrogenase 0.55 HSERO_RS05510 glucose-6-phosphate 1-dehydrogenase — —
Azospirillum sp. SherDot2 0.38 MPMX19_06097 D-amino acid dehydrogenase 1 0.50 MPMX19_05119 Glucose-6-phosphate 1-dehydrogenase low > 112
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS09560 D-amino acid dehydrogenase 0.52 ABZR87_RS22915 glucose-6-phosphate dehydrogenase low > 80
Ralstonia solanacearum UW163 0.36 UW163_RS15940 D-amino acid dehydrogenase small subunit 0.52 UW163_RS17130 glucose-6-phosphate dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.36 RALBFv3_RS13870 D-amino acid dehydrogenase small subunit 0.52 RALBFv3_RS16390 glucose-6-phosphate dehydrogenase low > 76
Rhodanobacter sp. FW510-T8 0.36 OKGIIK_06665 dadA D-amino acid dehydrogenase small subunit 0.52 OKGIIK_14360 zwf glucose-6-phosphate dehydrogenase — —
Agrobacterium fabrum C58 0.36 Atu3293 D-amino acid dehydrogenase small subunit 0.50 Atu0600 glucose-6-phosphate 1-dehydrogenase — —
Dickeya dadantii 3937 0.36 DDA3937_RS11170 D-amino acid dehydrogenase 0.44 DDA3937_RS10135 glucose-6-phosphate dehydrogenase low > 74
Rhodanobacter denitrificans MT42 0.36 LRK55_RS00360 D-amino acid dehydrogenase 0.51 LRK55_RS07600 glucose-6-phosphate dehydrogenase — —
Ralstonia solanacearum PSI07 0.36 RPSI07_RS19600 D-amino acid dehydrogenase small subunit 0.52 RPSI07_RS07315 glucose-6-phosphate dehydrogenase low > 81
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS00590 D-amino acid dehydrogenase 0.51 LRK54_RS07870 glucose-6-phosphate dehydrogenase — —
Pectobacterium carotovorum WPP14 0.36 HER17_RS11170 D-amino acid dehydrogenase 0.45 HER17_RS11780 glucose-6-phosphate dehydrogenase low > 75
Ralstonia solanacearum GMI1000 0.36 RS_RS04605 D-amino acid dehydrogenase small subunit 0.52 RS_RS24615 glucose-6-phosphate dehydrogenase low > 80
Dickeya dianthicola 67-19 0.36 HGI48_RS11195 D-amino acid dehydrogenase 0.44 HGI48_RS10165 glucose-6-phosphate dehydrogenase low > 71
Dickeya dianthicola ME23 0.36 DZA65_RS11540 D-amino acid dehydrogenase 0.44 DZA65_RS10580 glucose-6-phosphate dehydrogenase low > 75
Escherichia coli ECOR27 0.35 NOLOHH_20725 dadA D-amino acid dehydrogenase 0.44 NOLOHH_16845 zwf glucose-6-phosphate dehydrogenase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_02500 D-amino acid dehydrogenase 0.44 OHPLBJKB_01877 Glucose-6-phosphate 1-dehydrogenase low > 73
Escherichia coli ECRC101 0.35 OKFHMN_28290 dadA D-amino acid dehydrogenase 0.44 OKFHMN_26335 zwf glucose-6-phosphate dehydrogenase — —
Escherichia coli ECRC62 0.35 BNILDI_18890 dadA D-amino acid dehydrogenase 0.44 BNILDI_15640 zwf glucose-6-phosphate dehydrogenase — —
Escherichia coli Nissle 1917 0.35 ECOLIN_RS07185 D-amino acid dehydrogenase 0.44 ECOLIN_RS10315 glucose-6-phosphate dehydrogenase — —
Escherichia coli ECRC102 0.35 NIAGMN_27930 dadA D-amino acid dehydrogenase 0.44 NIAGMN_01725 zwf glucose-6-phosphate dehydrogenase — —
Escherichia coli BW25113 0.35 b1189 dadA D-amino acid dehydrogenase (quinone) DadA (EC 1.4.5.1) (from data) 0.44 b1852 zwf glucose-6-phosphate 1-dehydrogenase (NCBI) — —
Escherichia coli ECRC99 0.35 KEDOAH_25305 dadA D-amino acid dehydrogenase 0.44 KEDOAH_01770 zwf glucose-6-phosphate dehydrogenase — —
Escherichia coli ECOR38 0.35 HEPCGN_24750 dadA D-amino acid dehydrogenase 0.44 HEPCGN_04740 zwf glucose-6-phosphate dehydrogenase low > 85
Escherichia coli BL21 0.35 ECD_01164 D-amino acid dehydrogenase 0.44 ECD_01823 glucose-6-phosphate 1-dehydrogenase — —
Escherichia coli ECRC101 0.35 MCAODC_21880 dadA D-amino acid dehydrogenase 0.44 MCAODC_19070 zwf glucose-6-phosphate dehydrogenase — —
Escherichia fergusonii Becca 0.35 EFB2_02743 D-amino acid dehydrogenase 0.44 EFB2_02091 Glucose-6-phosphate 1-dehydrogenase low > 86
Escherichia coli ECRC98 0.35 JDDGAC_06220 dadA D-amino acid dehydrogenase 0.44 JDDGAC_00910 zwf glucose-6-phosphate dehydrogenase — —
Enterobacter asburiae PDN3 0.35 EX28DRAFT_0766 Glycine/D-amino acid oxidases (deaminating) 0.44 EX28DRAFT_0704 glucose-6-phosphate 1-dehydrogenase — —
Pantoea sp. MT58 0.35 IAI47_08890 D-amino acid dehydrogenase 0.44 IAI47_08495 glucose-6-phosphate dehydrogenase — —
Pseudomonas fluorescens GW456-L13 0.35 PfGW456L13_812 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.47 PfGW456L13_1901 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) low > 87
Pseudomonas simiae WCS417 0.35 PS417_27705 amino acid dehydrogenase 0.46 PS417_22110 glucose-6-phosphate dehydrogenase — —
Vibrio cholerae E7946 ATCC 55056 0.35 CSW01_04065 D-amino acid dehydrogenase small subunit 0.39 CSW01_18625 glucose-6-phosphate dehydrogenase low > 62
Enterobacter sp. TBS_079 0.35 MPMX20_02699 D-amino acid dehydrogenase 0.44 MPMX20_02757 Glucose-6-phosphate 1-dehydrogenase low > 85
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_2144 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.47 Pf1N1B4_589 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) — —
Pseudomonas putida KT2440 0.35 PP_4434 D-amino acid dehydrogenase 1 small subunit 0.51 PP_5351 glucose-6-phosphate 1-dehydrogenase low > 96
Pseudomonas sp. RS175 0.34 PFR28_04399 D-amino acid dehydrogenase 1 0.47 PFR28_00573 Glucose-6-phosphate 1-dehydrogenase low > 88
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_12620 amino acid dehydrogenase 0.47 AO356_05160 glucose-6-phosphate dehydrogenase low > 104
Serratia liquefaciens MT49 0.34 IAI46_14460 D-amino acid dehydrogenase 0.46 IAI46_14575 glucose-6-phosphate dehydrogenase — —
Pseudomonas fluorescens SBW25-INTG 0.34 PFLU_RS29380 D-amino acid dehydrogenase 0.46 PFLU_RS23725 glucose-6-phosphate dehydrogenase low > 109
Pseudomonas fluorescens SBW25 0.34 PFLU_RS29380 D-amino acid dehydrogenase 0.46 PFLU_RS23725 glucose-6-phosphate dehydrogenase low > 109
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_4391 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.47 Pf6N2E2_2885 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) low > 103
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_09155 amino acid dehydrogenase 0.47 AO353_03360 glucose-6-phosphate dehydrogenase low > 101
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_0235 D-amino acid dehydrogenase small subunit 0.47 Psyr_1120 glucose-6-phosphate 1-dehydrogenase low > 86
Xanthomonas campestris pv. campestris strain 8004 0.34 Xcc-8004.4621.1 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.36 Xcc-8004.2450.1 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) low > 74
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_0235 D-amino acid dehydrogenase small subunit 0.47 Psyr_1120 glucose-6-phosphate 1-dehydrogenase 0.49 79
Klebsiella michiganensis M5al 0.34 BWI76_RS17735 D-amino acid dehydrogenase small subunit 0.44 BWI76_RS18105 glucose-6-phosphate dehydrogenase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.34 GFF2804 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.44 GFF1631 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) low > 78
Pseudomonas sp. S08-1 0.34 OH686_13685 D-amino acid dehydrogenase 0.50 OH686_13085 glucose-6-phosphate dehydrogenase low > 80
Cupriavidus basilensis FW507-4G11 0.34 RR42_RS04585 amino acid dehydrogenase 0.52 RR42_RS37405 glucose-6-phosphate dehydrogenase low > 128
Paraburkholderia bryophila 376MFSha3.1 0.33 H281DRAFT_04287 D-amino-acid dehydrogenase 0.71 H281DRAFT_05358 glucose-6-phosphate 1-dehydrogenase low > 103
Paraburkholderia graminis OAS925 0.33 ABIE53_003133 D-amino-acid dehydrogenase 0.70 ABIE53_006464 glucose-6-phosphate 1-dehydrogenase low > 113
Pseudomonas stutzeri RCH2 0.33 Psest_3793 D-alanine dehydrogenase (EC 1.4.99.-) (from data) 0.52 Psest_4089 glucose-6-phosphate 1-dehydrogenase low > 67
Paraburkholderia sabiae LMG 24235 0.33 QEN71_RS04190 D-amino acid dehydrogenase 0.70 QEN71_RS08005 glucose-6-phosphate dehydrogenase low > 153
Burkholderia phytofirmans PsJN 0.33 BPHYT_RS17845 amino acid dehydrogenase 0.70 BPHYT_RS24370 glucose-6-phosphate 1-dehydrogenase low > 109
Rahnella sp. WP5 0.33 EX31_RS10485 D-amino acid dehydrogenase 0.45 EX31_RS10630 glucose-6-phosphate dehydrogenase — —
Dinoroseobacter shibae DFL-12 0.33 Dshi_0558 D-amino-acid dehydrogenase (RefSeq) 0.46 Dshi_1684 glucose-6-phosphate 1-dehydrogenase (RefSeq) — —
Erwinia tracheiphila SCR3 0.32 LU632_RS13070 D-amino acid dehydrogenase 0.44 LU632_RS13360 zwf glucose-6-phosphate dehydrogenase low > 74
Brevundimonas sp. GW460-12-10-14-LB2 0.32 A4249_RS08770 D-amino acid dehydrogenase 0.46 A4249_RS10725 glucose-6-phosphate dehydrogenase — —

Not shown: 6 genomes with orthologs for GFF1973 only; 27 genomes with orthologs for GFF5493 only