Conservation of cofitness between GFF4301 and GFF5098 in Hydrogenophaga sp. GW460-11-11-14-LB1

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF4301 macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif. 1.0 GFF5098 Sulfate transport system permease protein CysW 0.47 15
Acidovorax sp. GW101-3H11 0.77 Ac3H11_896 macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif. 0.74 Ac3H11_910 Sulfate transport system permease protein CysW low > 79
Variovorax sp. OAS795 0.75 ABID97_RS16615 ATP-dependent RNA helicase HrpA 0.83 ABID97_RS15580 sulfate ABC transporter permease subunit CysW low > 91
Variovorax sp. SCN45 0.74 GFF247 ATP-dependent helicase HrpA 0.84 GFF1289 Sulfate transport system permease protein CysW low > 127
Paraburkholderia sabiae LMG 24235 0.57 QEN71_RS05625 ATP-dependent RNA helicase HrpA 0.63 QEN71_RS22580 sulfate ABC transporter permease subunit CysW low > 153
Paraburkholderia graminis OAS925 0.56 ABIE53_002813 ATP-dependent helicase HrpA 0.63 ABIE53_001992 sulfate transport system permease protein low > 113
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS12980 ATP-dependent helicase 0.64 BPHYT_RS08800 sulfate ABC transporter permease low > 109
Herbaspirillum seropedicae SmR1 0.56 HSERO_RS17315 ATP-dependent helicase 0.70 HSERO_RS08235 sulfate ABC transporter permease low > 78
Ralstonia solanacearum PSI07 0.56 RPSI07_RS17865 ATP-dependent RNA helicase HrpA 0.69 RPSI07_RS17395 sulfate ABC transporter permease subunit CysW low > 81
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS11020 ATP-dependent RNA helicase HrpA 0.68 ABZR87_RS11545 sulfate ABC transporter permease subunit CysW low > 80
Ralstonia solanacearum GMI1000 0.56 RS_RS06270 ATP-dependent RNA helicase HrpA 0.66 RS_RS06750 sulfate ABC transporter permease subunit CysW low > 80
Ralstonia solanacearum UW163 0.56 UW163_RS12950 ATP-dependent RNA helicase HrpA 0.68 UW163_RS13420 sulfate ABC transporter permease subunit CysW
Ralstonia solanacearum IBSBF1503 0.56 RALBFv3_RS15490 ATP-dependent RNA helicase HrpA 0.68 RALBFv3_RS00090 sulfate ABC transporter permease subunit CysW low > 76
Cupriavidus basilensis FW507-4G11 0.55 RR42_RS13030 ATP-dependent helicase 0.69 RR42_RS12255 sulfate/thiosulfate transporter permease subunit low > 128
Castellaniella sp019104865 MT123 0.50 ABCV34_RS02420 ATP-dependent RNA helicase HrpA 0.60 ABCV34_RS03945 sulfate ABC transporter permease subunit CysW low > 48
Dechlorosoma suillum PS 0.50 Dsui_1373 ATP-dependent helicase HrpA 0.64 Dsui_0259 sulfate ABC transporter, permease protein CysW low > 51
Serratia liquefaciens MT49 0.40 IAI46_13330 ATP-dependent RNA helicase HrpA 0.49 IAI46_18500 sulfate/thiosulfate ABC transporter permease CysW low > 86
Pantoea sp. MT58 0.40 IAI47_09520 ATP-dependent RNA helicase HrpA 0.48 IAI47_05395 sulfate/thiosulfate ABC transporter permease CysW low > 76
Dickeya dianthicola ME23 0.40 DZA65_RS12800 ATP-dependent RNA helicase HrpA 0.53 DZA65_RS17065 sulfate ABC transporter permease subunit CysW low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF2632 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) 0.49 GFF2057 Sulfate transport system permease protein CysW low > 78
Dickeya dadantii 3937 0.40 DDA3937_RS12270 ATP-dependent RNA helicase HrpA 0.53 DDA3937_RS15840 sulfate ABC transporter permease subunit CysW 0.63 5
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_18225 ATP-dependent RNA helicase HrpA 0.56 AO353_11550 sulfate ABC transporter permease low > 101
Dickeya dianthicola 67-19 0.40 HGI48_RS12360 ATP-dependent RNA helicase HrpA 0.53 HGI48_RS15980 sulfate ABC transporter permease subunit CysW low > 71
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_4467 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) 0.56 PfGW456L13_484 Sulfate transport system permease protein CysW low > 87
Pseudomonas sp. RS175 0.40 PFR28_00739 hypothetical protein 0.57 PFR28_04764 Sulfate transport system permease protein CysW low > 88
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_3388 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) 0.56 Pf1N1B4_1725 Sulfate transport system permease protein CysW low > 87
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_2694 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) 0.58 Pf6N2E2_4003 Sulfate transport system permease protein CysW low > 103
Rahnella sp. WP5 0.39 EX31_RS06495 ATP-dependent RNA helicase HrpA 0.49 EX31_RS20215 sulfate/thiosulfate ABC transporter permease CysW low > 89
Pseudomonas simiae WCS417 0.39 PS417_20575 ATP-dependent helicase HrpA 0.57 PS417_00940 sulfate ABC transporter permease low > 88
Pectobacterium carotovorum WPP14 0.39 HER17_RS09660 ATP-dependent RNA helicase HrpA 0.59 HER17_RS05680 sulfate ABC transporter permease subunit CysW 0.67 52
Klebsiella michiganensis M5al 0.39 BWI76_RS13165 ATP-dependent RNA helicase HrpA 0.49 BWI76_RS20695 sulfate/thiosulfate transporter permease subunit low > 92
Enterobacter sp. TBS_079 0.39 MPMX20_02189 hypothetical protein 0.49 MPMX20_03315 Sulfate transport system permease protein CysW low > 85
Pseudomonas fluorescens SBW25 0.39 PFLU_RS22265 ATP-dependent RNA helicase HrpA 0.57 PFLU_RS00955 sulfate ABC transporter permease subunit CysW low > 109
Pseudomonas fluorescens SBW25-INTG 0.39 PFLU_RS22265 ATP-dependent RNA helicase HrpA 0.57 PFLU_RS00955 sulfate ABC transporter permease subunit CysW low > 109
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_04280 ATP-dependent RNA helicase HrpA 0.58 AO356_10675 sulfate ABC transporter permease low > 104
Escherichia coli BW25113 0.39 b1413 hrpA ATP-dependent helicase (RefSeq) 0.49 b2423 cysW sulfate/thiosulfate transporter subunit (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_02301 hypothetical protein 0.49 OHPLBJKB_01300 Sulfate transport system permease protein CysW low > 73
Escherichia coli ECRC62 0.39 BNILDI_17845 hrpA ATP-dependent RNA helicase HrpA 0.49 BNILDI_12705 cysW sulfate/thiosulfate ABC transporter permease CysW low > 75
Escherichia coli ECRC100 0.39 OKFHMN_01730 hrpA ATP-dependent RNA helicase HrpA 0.49 OKFHMN_22160 cysW sulfate/thiosulfate ABC transporter permease CysW low > 80
Escherichia coli ECRC99 0.39 KEDOAH_26710 hrpA ATP-dependent RNA helicase HrpA 0.49 KEDOAH_06060 cysW sulfate/thiosulfate ABC transporter permease CysW
Escherichia coli ECRC102 0.39 NIAGMN_25865 hrpA ATP-dependent RNA helicase HrpA 0.49 NIAGMN_19930 cysW sulfate/thiosulfate ABC transporter permease CysW
Escherichia coli ECRC98 0.39 JDDGAC_04220 hrpA ATP-dependent RNA helicase HrpA 0.49 JDDGAC_26110 cysW sulfate/thiosulfate ABC transporter permease CysW low > 86
Escherichia coli ECRC101 0.39 MCAODC_16205 hrpA ATP-dependent RNA helicase HrpA 0.49 MCAODC_12690 cysW sulfate/thiosulfate ABC transporter permease CysW low > 87
Escherichia coli Nissle 1917 0.39 ECOLIN_RS08180 ATP-dependent RNA helicase HrpA 0.49 ECOLIN_RS13910 sulfate/thiosulfate ABC transporter permease CysW
Escherichia coli BL21 0.39 ECD_01368 putative ATP-dependent helicase 0.49 ECD_02323 sulfate/thiosulfate ABC transporter permease low > 61
Enterobacter asburiae PDN3 0.39 EX28DRAFT_1357 RNA helicase HrpA 0.49 EX28DRAFT_0207 sulfate ABC transporter, permease protein CysW 0.42 26
Escherichia coli ECOR27 0.39 NOLOHH_19390 hrpA ATP-dependent RNA helicase HrpA 0.49 NOLOHH_13840 cysW sulfate/thiosulfate ABC transporter permease CysW low > 75
Escherichia fergusonii Becca 0.39 EFB2_02565 hypothetical protein 0.49 EFB2_01454 Sulfate transport system permease protein CysW low > 86
Erwinia tracheiphila SCR3 0.39 LU632_RS12630 hrpA ATP-dependent RNA helicase HrpA 0.48 LU632_RS06685 cysW sulfate/thiosulfate ABC transporter permease CysW low > 74
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_06950 ATP-dependent RNA helicase HrpA 0.45 CSW01_02860 sulfate ABC transporter permease subunit CysW low > 62
Escherichia coli ECOR38 0.39 HEPCGN_26110 hrpA ATP-dependent RNA helicase HrpA 0.49 HEPCGN_21335 cysW sulfate/thiosulfate ABC transporter permease CysW low > 87
Shewanella sp. ANA-3 0.39 Shewana3_1897 ATP-dependent helicase HrpA (RefSeq) 0.48 Shewana3_3191 sulfate ABC transporter, inner membrane subunit CysW (RefSeq) low > 73
Shewanella oneidensis MR-1 0.39 SO2229 hrpA ATP-dependent helicase HrpA (NCBI ptt file) 0.62 SO4654 cysW-2 sulfate ABC transporter, permease protein (NCBI ptt file) low > 76
Pseudomonas syringae pv. syringae B728a 0.39 Psyr_3831 ATP-dependent helicase HrpA 0.59 Psyr_0082 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.39 Psyr_3831 ATP-dependent helicase HrpA 0.59 Psyr_0082 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas sp. S08-1 0.38 OH686_05730 RNA helicase HrpA 0.56 OH686_11680 sulfate ABC transporter, permease protein CysW low > 80
Marinobacter adhaerens HP15 0.38 HP15_1863 RNA helicase, ATP-dependent DEAH box, HrpA type 0.52 HP15_1346 sulfate ABC transporter, inner membrane subunit CysW low > 73
Pseudomonas putida KT2440 0.38 PP_4546 ATP-dependent helicase HrpA 0.61 PP_5169 sulfate ABC transporter, inner membrane subunit CysW low > 96
Pseudomonas stutzeri RCH2 0.36 Psest_1339 ATP-dependent helicase HrpA 0.58 Psest_4062 sulfate ABC transporter, permease protein CysW low > 67
Acinetobacter radioresistens SK82 0.32 MPMX26_02008 hypothetical protein 0.67 MPMX26_02169 Sulfate transport system permease protein CysW low > 36
Lysobacter sp. OAE881 0.32 ABIE51_RS05155 ATP-dependent RNA helicase HrpA 0.50 ABIE51_RS01845 sulfate ABC transporter permease subunit CysW low > 62

Not shown: 8 genomes with orthologs for GFF4301 only; 15 genomes with orthologs for GFF5098 only