Conservation of cofitness between Psest_0309 and Psest_0514 in Pseudomonas stutzeri RCH2

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0309 RND family efflux transporter, MFP subunit 1.0 Psest_0514 lytic murein transglycosylase B 0.35 5
Pseudomonas sp. S08-1 0.72 OH686_16045 Multidrug efflux system, membrane fusion component 0.68 OH686_09310 lytic murein transglycosylase B low > 80
Pseudomonas fluorescens FW300-N2E2 0.66 Pf6N2E2_2823 Multidrug efflux RND membrane fusion protein MexC 0.70 Pf6N2E2_4999 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 103
Pseudomonas fluorescens FW300-N2C3 0.66 AO356_04875 antibiotic transporter 0.69 AO356_15320 lytic transglycosylase 0.36 79
Pseudomonas sp. RS175 0.66 PFR28_00632 putative efflux pump periplasmic linker TtgA 0.69 PFR28_03866 Membrane-bound lytic murein transglycosylase B low > 88
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS06810 efflux RND transporter periplasmic adaptor subunit 0.71 PFLU_RS26645 lytic murein transglycosylase B low > 109
Pseudomonas fluorescens SBW25 0.64 PFLU_RS06810 efflux RND transporter periplasmic adaptor subunit 0.71 PFLU_RS26645 lytic murein transglycosylase B low > 109
Pseudomonas syringae pv. syringae B728a 0.64 Psyr_4007 Secretion protein HlyD 0.68 Psyr_4363 membrane-bound lytic murein transglycosylase B low > 86
Pseudomonas simiae WCS417 0.64 PS417_06775 antibiotic transporter 0.71 PS417_24715 lytic transglycosylase low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.64 Psyr_4007 Secretion protein HlyD 0.68 Psyr_4363 membrane-bound lytic murein transglycosylase B low > 86
Pseudomonas fluorescens FW300-N1B4 0.64 Pf1N1B4_3247 Multidrug efflux RND membrane fusion protein MexC 0.69 Pf1N1B4_2694 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) — —
Pseudomonas putida KT2440 0.63 PP_1386 Probable efflux pump periplasmic linker TtgA 0.68 PP_4805 membrane-bound lytic murein transglycosylase B low > 96
Pseudomonas fluorescens GW456-L13 0.63 PfGW456L13_4580 Multidrug efflux RND membrane fusion protein MexC 0.70 PfGW456L13_1362 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 87
Pseudomonas fluorescens FW300-N2E3 0.61 AO353_17300 antibiotic transporter 0.70 AO353_06465 lytic transglycosylase low > 101
Rahnella sp. WP5 0.50 EX31_RS22475 efflux RND transporter periplasmic adaptor subunit 0.38 EX31_RS07810 lytic murein transglycosylase B low > 89
Klebsiella michiganensis M5al 0.50 BWI76_RS06780 MexE family multidrug efflux RND transporter periplasmic adaptor subunit 0.38 BWI76_RS22210 murein transglycosylase B low > 92
Escherichia coli BL21 0.50 ECD_00414 multidrug efflux system 0.39 ECD_02551 membrane-bound lytic murein transglycosylase B low > 60
Escherichia coli BW25113 0.50 b0463 acrA multidrug efflux system (NCBI) 0.39 b2701 mltB membrane-bound lytic murein transglycosylase B (NCBI) low > 76
Escherichia coli Nissle 1917 0.49 ECOLIN_RS02755 multidrug efflux RND transporter periplasmic adaptor subunit AcrA 0.39 ECOLIN_RS15070 lytic murein transglycosylase B — —
Escherichia fergusonii Becca 0.49 EFB2_03595 Multidrug efflux pump subunit AcrA 0.39 EFB2_01223 Membrane-bound lytic murein transglycosylase B low > 86
Dickeya dadantii 3937 0.49 DDA3937_RS05740 efflux RND transporter periplasmic adaptor subunit 0.37 DDA3937_RS03745 lytic murein transglycosylase B low > 74
Enterobacter asburiae PDN3 0.49 EX28DRAFT_2495 RND family efflux transporter, MFP subunit 0.39 EX28DRAFT_2790 lytic murein transglycosylase B low > 76
Serratia liquefaciens MT49 0.49 IAI46_05190 multidrug efflux RND transporter periplasmic adaptor subunit SdeX 0.39 IAI46_18155 lytic murein transglycosylase B low > 86
Dickeya dianthicola 67-19 0.48 HGI48_RS05795 efflux RND transporter periplasmic adaptor subunit 0.37 HGI48_RS03780 lytic murein transglycosylase B low > 71
Dickeya dianthicola ME23 0.48 DZA65_RS06120 efflux RND transporter periplasmic adaptor subunit 0.37 DZA65_RS03910 lytic murein transglycosylase B low > 75
Erwinia tracheiphila SCR3 0.48 LU632_RS18180 efflux RND transporter periplasmic adaptor subunit 0.36 LU632_RS15745 mltB lytic murein transglycosylase B — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.47 GFF4380 Membrane fusion protein of RND family multidrug efflux pump 0.39 GFF4695 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 78
Pantoea sp. MT58 0.47 IAI47_14510 efflux RND transporter periplasmic adaptor subunit 0.37 IAI47_04275 lytic murein transglycosylase B low > 76
Pectobacterium carotovorum WPP14 0.47 HER17_RS15735 efflux RND transporter periplasmic adaptor subunit 0.38 HER17_RS16185 lytic murein transglycosylase B low > 75
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS18280 efflux RND transporter periplasmic adaptor subunit 0.39 ABZR86_RS17480 lytic murein transglycosylase B low > 74
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS19790 efflux RND transporter periplasmic adaptor subunit 0.31 RALBFv3_RS13830 lytic murein transglycosylase B low > 76
Ralstonia solanacearum UW163 0.45 UW163_RS19385 efflux RND transporter periplasmic adaptor subunit 0.31 UW163_RS15980 lytic murein transglycosylase B — —
Shewanella amazonensis SB2B 0.45 Sama_3553 multidrug resistance protein AcrA/AcrE family (RefSeq) 0.38 Sama_2590 lytic murein transglycosylase B (RefSeq) low > 62
Ralstonia solanacearum GMI1000 0.45 RS_RS21035 efflux RND transporter periplasmic adaptor subunit 0.31 RS_RS04565 lytic murein transglycosylase B low > 80
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS23060 hemolysin D 0.38 HSERO_RS04945 murein transglycosylase low > 78
Ralstonia solanacearum PSI07 0.44 RPSI07_RS03395 efflux RND transporter periplasmic adaptor subunit 0.31 RPSI07_RS19640 lytic murein transglycosylase B low > 81
Shewanella oneidensis MR-1 0.44 SO4693 multidrug resistance protein, AcrA/AcrE family (NCBI ptt file) 0.37 SO1166 membrane-bound lytic transglycosylase, putative (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.44 Shewana3_4046 RND family efflux transporter MFP subunit (RefSeq) 0.38 Shewana3_0993 lytic murein transglycosylase B (RefSeq) low > 73
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS16175 hemolysin D 0.33 BPHYT_RS14840 lytic transglycosylase low > 109
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS32415 hemolysin D 0.35 RR42_RS04540 lytic transglycosylase 0.20 127
Shewanella loihica PV-4 0.41 Shew_0031 RND family efflux transporter MFP subunit (RefSeq) 0.39 Shew_2937 lytic murein transglycosylase B (RefSeq) — —
Ralstonia sp. UNC404CL21Col 0.39 ABZR87_RS05310 efflux RND transporter periplasmic adaptor subunit 0.31 ABZR87_RS09520 lytic murein transglycosylase B low > 80
Acinetobacter radioresistens SK82 0.38 MPMX26_00690 Multidrug efflux pump subunit AcrA 0.29 MPMX26_02108 Membrane-bound lytic murein transglycosylase B low > 36
Acidovorax sp. GW101-3H11 0.34 Ac3H11_4449 RND efflux system, membrane fusion protein CmeA 0.33 Ac3H11_3197 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 79
Castellaniella sp019104865 MT123 0.33 ABCV34_RS04230 efflux RND transporter periplasmic adaptor subunit 0.25 ABCV34_RS07050 lytic murein transglycosylase B low > 48
Dechlorosoma suillum PS 0.31 Dsui_3181 RND family efflux transporter, MFP subunit 0.36 Dsui_1972 lytic murein transglycosylase B low > 51
Rhodanobacter sp. FW510-T8 0.30 OKGIIK_09165 acrA efflux transporter periplasmic adaptor subunit 0.38 OKGIIK_00080 mltB lytic murein transglycosylase B low > 52
Kangiella aquimarina DSM 16071 0.30 B158DRAFT_0734 RND family efflux transporter, MFP subunit 0.41 B158DRAFT_0081 lytic murein transglycosylase B low > 40
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS02095 efflux RND transporter periplasmic adaptor subunit 0.40 LRK54_RS06500 lytic murein transglycosylase B low > 59
Rhodanobacter denitrificans MT42 0.29 LRK55_RS01870 efflux RND transporter periplasmic adaptor subunit 0.40 LRK55_RS06245 lytic murein transglycosylase B low > 63

Not shown: 34 genomes with orthologs for Psest_0309 only; 0 genomes with orthologs for Psest_0514 only