Conservation of cofitness between GFF651 and GFF4893 in Hydrogenophaga sp. GW460-11-11-14-LB1

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF651 Aspartate carbamoyltransferase (EC 2.1.3.2) 1.0 GFF4893 Nitrogen regulation protein NR(I) 0.73 8
Variovorax sp. OAS795 0.90 ABID97_RS24660 aspartate carbamoyltransferase catalytic subunit 0.88 ABID97_RS14090 response regulator transcription factor low > 91
Variovorax sp. SCN45 0.89 GFF2160 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.87 GFF965 Two-component transcriptional response regulator, LuxR family — —
Acidovorax sp. GW101-3H11 0.89 Ac3H11_3978 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.90 Ac3H11_4095 Nitrogen regulation protein NR(I) — —
Ralstonia solanacearum GMI1000 0.82 RS_RS03410 aspartate carbamoyltransferase 0.61 RS_RS08045 DNA-binding response regulator — —
Cupriavidus basilensis FW507-4G11 0.82 RR42_RS15860 aspartate carbamoyltransferase catalytic subunit 0.65 RR42_RS07355 LuxR family transcriptional regulator — —
Ralstonia solanacearum PSI07 0.82 RPSI07_RS20635 aspartate carbamoyltransferase catalytic subunit 0.61 RPSI07_RS15805 DNA-binding response regulator — —
Ralstonia solanacearum UW163 0.81 UW163_RS00940 aspartate carbamoyltransferase catalytic subunit 0.61 UW163_RS14990 DNA-binding response regulator — —
Paraburkholderia bryophila 376MFSha3.1 0.81 H281DRAFT_04817 aspartate carbamoyltransferase 0.64 H281DRAFT_00464 two component transcriptional regulator, LuxR family — —
Paraburkholderia graminis OAS925 0.81 ABIE53_001131 aspartate carbamoyltransferase catalytic subunit 0.63 ABIE53_002795 FixJ family two-component response regulator — —
Ralstonia solanacearum IBSBF1503 0.81 RALBFv3_RS12625 aspartate carbamoyltransferase catalytic subunit 0.61 RALBFv3_RS01680 DNA-binding response regulator — —
Ralstonia sp. UNC404CL21Col 0.81 ABZR87_RS08625 aspartate carbamoyltransferase catalytic subunit 0.61 ABZR87_RS13480 response regulator transcription factor — —
Burkholderia phytofirmans PsJN 0.81 BPHYT_RS04235 aspartate carbamoyltransferase 0.63 BPHYT_RS12850 LuxR family transcriptional regulator — —
Paraburkholderia sabiae LMG 24235 0.81 QEN71_RS25780 aspartate carbamoyltransferase catalytic subunit 0.63 QEN71_RS05715 oxygen response regulator transcription factor FixJ — —
Herbaspirillum seropedicae SmR1 0.80 HSERO_RS02330 aspartate carbamoyltransferase 0.43 HSERO_RS06700 LuxR family transcriptional regulator low > 78
Dechlorosoma suillum PS 0.76 Dsui_0596 aspartate carbamoyltransferase 0.49 Dsui_1581 response regulator — —
Pseudomonas sp. S08-1 0.66 OH686_10940 aspartate carbamoyltransferase 0.36 OH686_18645 Two-component transcriptional response regulator, LuxR family — —
Pseudomonas simiae WCS417 0.65 PS417_26700 aspartate carbamoyltransferase catalytic subunit 0.35 PS417_10320 hypothetical protein — —
Pseudomonas fluorescens GW456-L13 0.65 PfGW456L13_1016 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.43 PfGW456L13_3749 Nitrogen regulation protein NR(I) — —
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_4606 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.35 Pf6N2E2_1724 DNA-binding response regulator, LuxR family — —
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_13450 aspartate carbamoyltransferase catalytic subunit 0.34 AO356_25435 nodulation protein NolW — —
Pseudomonas fluorescens FW300-N1B4 0.65 Pf1N1B4_2347 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.35 Pf1N1B4_4408 two-component response regulator — —
Pseudomonas sp. RS175 0.65 PFR28_04237 Aspartate carbamoyltransferase 0.34 PFR28_02521 Response regulator protein TmoT — —
Marinobacter adhaerens HP15 0.62 HP15_3507 aspartate carbamoyltransferase 0.45 HP15_1053 two component transcriptional regulator, LuxR family low > 73
Sinorhizobium meliloti 1021 0.49 SMc01360 aspartate carbamoyltransferase catalytic subunit 0.38 SMa1227 response regulator FixJ low > 103
Rhizobium sp. OAE497 0.47 ABIE40_RS07385 aspartate carbamoyltransferase catalytic subunit 0.37 ABIE40_RS23715 response regulator — —
Magnetospirillum magneticum AMB-1 0.47 AMB_RS18300 aspartate carbamoyltransferase 0.47 AMB_RS04570 DNA-binding response regulator — —
Agrobacterium fabrum C58 0.47 Atu1308 aspartate carbamoyl transferase catalytic subunit 0.36 Atu4774 two component response regulator low > 89
Brevundimonas sp. GW460-12-10-14-LB2 0.46 A4249_RS04260 aspartate carbamoyltransferase catalytic subunit 0.33 A4249_RS15535 response regulator — —
Lysobacter sp. OAE881 0.45 ABIE51_RS16015 aspartate carbamoyltransferase catalytic subunit 0.35 ABIE51_RS09725 response regulator — —
Rhodopseudomonas palustris CGA009 0.45 TX73_016120 aspartate carbamoyltransferase catalytic subunit 0.40 TX73_022010 response regulator FixJ — —
Dinoroseobacter shibae DFL-12 0.44 Dshi_3091 aspartate carbamoyltransferase (RefSeq) 0.32 Dshi_2568 two component transcriptional regulator, LuxR family (RefSeq) low > 64
Dyella japonica UNC79MFTsu3.2 0.44 ABZR86_RS10390 aspartate carbamoyltransferase catalytic subunit 0.43 ABZR86_RS13745 response regulator — —
Caulobacter crescentus NA1000 0.43 CCNA_02525 aspartate carbamoyltransferase 0.39 CCNA_00795 two-component response regulator FixJ low > 66
Caulobacter crescentus NA1000 Δfur 0.43 CCNA_02525 aspartate carbamoyltransferase 0.39 CCNA_00795 two-component response regulator FixJ low > 67
Sphingomonas koreensis DSMZ 15582 0.42 Ga0059261_0076 aspartate carbamoyltransferase (EC 2.1.3.2) 0.35 Ga0059261_4074 two component transcriptional regulator, LuxR family — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.22 GFF930 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.32 GFF3576 Tetrathionate reductase two-component response regulator low > 78
Pantoea sp. MT58 0.20 IAI47_16860 aspartate carbamoyltransferase 0.32 IAI47_20275 response regulator transcription factor low > 76
Dickeya dadantii 3937 0.20 DDA3937_RS01925 aspartate carbamoyltransferase 0.35 DDA3937_RS07235 response regulator transcription factor low > 74
Klebsiella michiganensis M5al 0.20 BWI76_RS02995 aspartate carbamoyltransferase 0.33 BWI76_RS14640 DNA-binding response regulator — —
Serratia liquefaciens MT49 0.20 IAI46_02275 aspartate carbamoyltransferase 0.34 IAI46_04860 response regulator transcription factor low > 86
Shewanella oneidensis MR-1 0.19 SO1301 pyrB aspartate carbamoyltransferase (NCBI ptt file) 0.38 SO4157 DNA-binding response regulator (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.19 Shewana3_3070 aspartate carbamoyltransferase (RefSeq) 0.39 Shewana3_0637 two component LuxR family transcriptional regulator (RefSeq) low > 73
Shewanella loihica PV-4 0.18 Shew_1013 aspartate carbamoyltransferase (RefSeq) 0.42 Shew_3240 two component LuxR family transcriptional regulator (RefSeq) low > 60
Shewanella amazonensis SB2B 0.18 Sama_0840 aspartate carbamoyltransferase (RefSeq) 0.37 Sama_2399 response regulator receiver protein (RefSeq) low > 62

Not shown: 58 genomes with orthologs for GFF651 only; 1 genomes with orthologs for GFF4893 only