Conservation of cofitness between PS417_23375 and PS417_23380 in Pseudomonas simiae WCS417

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_23375 cytochrome C oxidase 1.0 PS417_23380 cytochrome o ubiquinol oxidase subunit III 0.78 4
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS25205 cytochrome o ubiquinol oxidase subunit IV 1.00 PFLU_RS25210 cytochrome o ubiquinol oxidase subunit III 0.89 4
Pseudomonas fluorescens SBW25 1.00 PFLU_RS25205 cytochrome o ubiquinol oxidase subunit IV 1.00 PFLU_RS25210 cytochrome o ubiquinol oxidase subunit III 0.90 4
Pseudomonas fluorescens FW300-N1B4 0.88 Pf1N1B4_970 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) 0.88 Pf1N1B4_971 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.98 1
Pseudomonas sp. RS175 0.82 PFR28_00245 Cytochrome bo(3) ubiquinol oxidase subunit 4 0.80 PFR28_00244 Cytochrome bo(3) ubiquinol oxidase subunit 3 0.33 4
Pseudomonas fluorescens FW300-N2E2 0.82 Pf6N2E2_5320 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) 0.80 Pf6N2E2_5319 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.95 3
Pseudomonas fluorescens FW300-N2C3 0.82 AO356_16975 cytochrome C oxidase 0.81 AO356_16970 cytochrome o ubiquinol oxidase subunit III 0.89 3
Pseudomonas fluorescens GW456-L13 0.80 PfGW456L13_4933 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) 0.82 PfGW456L13_4934 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.95 2
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_15465 cytochrome C oxidase 0.80 AO353_15460 cytochrome o ubiquinol oxidase subunit III 0.91 3
Pseudomonas putida KT2440 0.68 PP_0815 cytochrome bo terminal oxidase subunit IV 0.69 PP_0814 cytochrome bo terminal oxidase subunit III — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.65 Psyr_1144 cytochrome bo3 quinol oxidase subunit 4 0.71 Psyr_1143 cytochrome bo3 quinol oxidase subunit 3 — —
Pseudomonas syringae pv. syringae B728a 0.65 Psyr_1144 cytochrome bo3 quinol oxidase subunit 4 0.71 Psyr_1143 cytochrome bo3 quinol oxidase subunit 3 — —
Cupriavidus basilensis FW507-4G11 0.55 RR42_RS32585 cytochrome C oxidase 0.59 RR42_RS32590 cytochrome o ubiquinol oxidase subunit III 0.49 5
Dickeya dadantii 3937 0.53 DDA3937_RS05600 cytochrome o ubiquinol oxidase subunit IV 0.67 DDA3937_RS05605 cytochrome o ubiquinol oxidase subunit III — —
Dickeya dianthicola ME23 0.53 DZA65_RS05970 cytochrome o ubiquinol oxidase subunit IV 0.67 DZA65_RS05975 cytochrome o ubiquinol oxidase subunit III — —
Dickeya dianthicola 67-19 0.53 HGI48_RS05645 cytochrome o ubiquinol oxidase subunit IV 0.66 HGI48_RS05650 cytochrome o ubiquinol oxidase subunit III — —
Pectobacterium carotovorum WPP14 0.52 HER17_RS15890 cytochrome o ubiquinol oxidase subunit IV 0.67 HER17_RS15885 cytochrome o ubiquinol oxidase subunit III 0.72 64
Rahnella sp. WP5 0.49 EX31_RS22205 cytochrome o ubiquinol oxidase subunit IV 0.70 EX31_RS22210 cytochrome o ubiquinol oxidase subunit III 0.97 3
Serratia liquefaciens MT49 0.49 IAI46_04970 cytochrome o ubiquinol oxidase subunit IV 0.67 IAI46_04975 cytochrome o ubiquinol oxidase subunit III 0.51 16
Pantoea sp. MT58 0.49 IAI47_14695 cytochrome o ubiquinol oxidase subunit IV 0.70 IAI47_14690 cytochrome o ubiquinol oxidase subunit III 0.87 4
Shewanella loihica PV-4 0.48 Shew_0369 cytochrome C oxidase subunit IV (RefSeq) 0.60 Shew_0368 cytochrome c oxidase, subunit III (RefSeq) low > 60
Acinetobacter radioresistens SK82 0.48 MPMX26_01159 Cytochrome bo(3) ubiquinol oxidase subunit 4 0.53 MPMX26_01160 Cytochrome bo(3) ubiquinol oxidase subunit 3 0.81 4
Shewanella sp. ANA-3 0.47 Shewana3_4034 cytochrome C oxidase subunit IV (RefSeq) 0.61 Shewana3_4033 cytochrome c oxidase, subunit III (RefSeq) low > 73
Erwinia tracheiphila SCR3 0.47 LU632_RS18390 cytochrome o ubiquinol oxidase subunit IV 0.71 LU632_RS18385 cytochrome o ubiquinol oxidase subunit III — —
Escherichia fergusonii Becca 0.47 EFB2_03628 Cytochrome bo(3) ubiquinol oxidase subunit 4 0.70 EFB2_03627 Cytochrome bo(3) ubiquinol oxidase subunit 3 low > 86
Escherichia coli ECRC98 0.46 JDDGAC_12030 cyoD cytochrome o ubiquinol oxidase subunit III 0.70 JDDGAC_12025 cyoC cytochrome o ubiquinol oxidase subunit III — —
Escherichia coli ECRC62 0.46 BNILDI_22725 cyoD cytochrome o ubiquinol oxidase subunit III 0.70 BNILDI_22720 cyoC cytochrome o ubiquinol oxidase subunit III — —
Escherichia coli ECOR38 0.46 HEPCGN_06990 cyoD cytochrome o ubiquinol oxidase subunit III 0.70 HEPCGN_06985 cyoC cytochrome o ubiquinol oxidase subunit III low > 85
Escherichia coli ECOR27 0.46 NOLOHH_01310 cyoD cytochrome o ubiquinol oxidase subunit III 0.70 NOLOHH_01305 cyoC cytochrome o ubiquinol oxidase subunit III low > 57
Escherichia coli BL21 0.46 ECD_00380 cytochrome o ubiquinol oxidase subunit IV 0.70 ECD_00381 cytochrome o ubiquinol oxidase subunit III 0.66 3
Escherichia coli BW25113 0.46 b0429 cyoD cytochrome o ubiquinol oxidase subunit IV (NCBI) 0.70 b0430 cyoC cytochrome o ubiquinol oxidase subunit III (NCBI) 0.90 4
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF4343 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) 0.70 GFF4344 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.85 2
Escherichia coli ECRC101 0.46 OKFHMN_08375 cyoD cytochrome o ubiquinol oxidase subunit III 0.70 OKFHMN_08370 cyoC cytochrome o ubiquinol oxidase subunit III — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_03244 Cytochrome bo(3) ubiquinol oxidase subunit 4 0.70 OHPLBJKB_03243 Cytochrome bo(3) ubiquinol oxidase subunit 3 0.56 12
Escherichia coli ECRC102 0.46 NIAGMN_06430 cyoD cytochrome o ubiquinol oxidase subunit III 0.70 NIAGMN_06425 cyoC cytochrome o ubiquinol oxidase subunit III — —
Escherichia coli ECRC101 0.46 MCAODC_27600 cyoD cytochrome o ubiquinol oxidase subunit III 0.70 MCAODC_27595 cyoC cytochrome o ubiquinol oxidase subunit III — —
Escherichia coli ECRC99 0.46 KEDOAH_19590 cyoD cytochrome o ubiquinol oxidase subunit III 0.70 KEDOAH_19595 cyoC cytochrome o ubiquinol oxidase subunit III — —
Alteromonas macleodii MIT1002 0.46 MIT1002_03926 Cytochrome o ubiquinol oxidase protein CyoD 0.59 MIT1002_03927 Cytochrome o ubiquinol oxidase subunit 3 low > 70
Escherichia coli Nissle 1917 0.46 ECOLIN_RS02580 cytochrome o ubiquinol oxidase subunit IV 0.70 ECOLIN_RS02585 cytochrome o ubiquinol oxidase subunit III 0.84 20
Xanthomonas campestris pv. campestris strain 8004 0.45 Xcc-8004.3814.1 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) 0.51 Xcc-8004.3815.1 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) — —
Brevundimonas sp. GW460-12-10-14-LB2 0.45 A4249_RS04460 cytochrome o ubiquinol oxidase subunit IV 0.53 A4249_RS04455 cytochrome o ubiquinol oxidase subunit III — —
Ralstonia solanacearum GMI1000 0.45 RS_RS14595 cytochrome o ubiquinol oxidase subunit IV 0.59 RS_RS14600 cytochrome o ubiquinol oxidase subunit III — —
Enterobacter asburiae PDN3 0.45 EX28DRAFT_2542 cytochrome o ubiquinol oxidase subunit IV 0.70 EX28DRAFT_2541 cytochrome o ubiquinol oxidase, subunit III — —
Enterobacter sp. TBS_079 0.45 MPMX20_01020 Cytochrome bo(3) ubiquinol oxidase subunit 4 0.64 MPMX20_01021 Cytochrome bo(3) ubiquinol oxidase subunit 3 0.56 4
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS02320 cytochrome o ubiquinol oxidase subunit IV 0.56 ABZR87_RS02325 cytochrome o ubiquinol oxidase subunit III 0.51 8
Caulobacter crescentus NA1000 Δfur 0.45 CCNA_01848 quinol cytochrome oxidase polypeptide IV 0.50 CCNA_01849 quinol cytochrome oxidase polypeptide III low > 67
Caulobacter crescentus NA1000 0.45 CCNA_01848 quinol cytochrome oxidase polypeptide IV 0.50 CCNA_01849 quinol cytochrome oxidase polypeptide III 0.92 2
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS24930 cytochrome C oxidase subunit III 0.55 BPHYT_RS24925 cytochrome O ubiquinol oxidase 0.19 98
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS36885 cytochrome o ubiquinol oxidase subunit IV 0.57 QEN71_RS15350 cytochrome o ubiquinol oxidase subunit III — —
Klebsiella michiganensis M5al 0.43 BWI76_RS06480 cytochrome o ubiquinol oxidase subunit IV 0.73 BWI76_RS06485 cytochrome o ubiquinol oxidase subunit III — —
Ralstonia solanacearum UW163 0.40 UW163_RS06980 cytochrome o ubiquinol oxidase subunit IV 0.59 UW163_RS06975 cytochrome o ubiquinol oxidase subunit III — —
Sinorhizobium meliloti 1021 0.40 SM_b22024 cytochrome O ubiquinol oxidase CyoD 0.57 SM_b21489 cytochrome O ubiquinol oxidase subunit III — —
Ralstonia solanacearum IBSBF1503 0.40 RALBFv3_RS06645 cytochrome o ubiquinol oxidase subunit IV 0.59 RALBFv3_RS06650 cytochrome o ubiquinol oxidase subunit III — —
Variovorax sp. SCN45 0.39 GFF5675 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) 0.57 GFF5676 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.76 55
Paraburkholderia bryophila 376MFSha3.1 0.39 H281DRAFT_03429 cytochrome bo3 quinol oxidase subunit 4 (EC 1.10.3.-) 0.56 H281DRAFT_03428 cytochrome bo3 quinol oxidase subunit 3 (EC 1.10.3.-) low > 103
Ralstonia solanacearum PSI07 0.38 RPSI07_RS10580 cytochrome o ubiquinol oxidase subunit IV 0.59 RPSI07_RS10575 cytochrome o ubiquinol oxidase subunit III — —
Agrobacterium fabrum C58 0.37 Atu0139 cytochrome o ubiquinol oxidase subunit IV 0.55 Atu0140 cytochrome o ubiquinol oxidase subunit III — —
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS07610 cytochrome o ubiquinol oxidase subunit IV 0.54 ABZR86_RS07615 cytochrome o ubiquinol oxidase subunit III 0.86 3
Variovorax sp. OAS795 0.36 ABID97_RS07625 cytochrome o ubiquinol oxidase subunit IV 0.57 ABID97_RS07630 cytochrome o ubiquinol oxidase subunit III 0.56 21
Sphingomonas koreensis DSMZ 15582 0.36 Ga0059261_1563 cytochrome bo3 quinol oxidase subunit 4 (EC 1.10.3.-) 0.56 Ga0059261_1564 cytochrome bo3 quinol oxidase subunit 3 (EC 1.10.3.-) 0.74 3
Paraburkholderia graminis OAS925 0.35 ABIE53_005343 cytochrome o ubiquinol oxidase operon protein cyoD 0.58 ABIE53_005342 cytochrome o ubiquinol oxidase subunit 3 — —
Lysobacter sp. OAE881 0.35 ABIE51_RS09780 cytochrome o ubiquinol oxidase subunit IV 0.51 ABIE51_RS09775 cytochrome o ubiquinol oxidase subunit III 0.77 3
Acidovorax sp. GW101-3H11 0.35 Ac3H11_3144 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) 0.53 Ac3H11_3143 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) — —
Rhizobium sp. OAE497 0.35 ABIE40_RS20875 cytochrome o ubiquinol oxidase subunit IV 0.56 ABIE40_RS19825 cytochrome o ubiquinol oxidase subunit III low > 107
Bosea sp. OAE506 0.35 ABIE41_RS21035 cytochrome o ubiquinol oxidase subunit IV 0.54 ABIE41_RS21030 cytochrome o ubiquinol oxidase subunit III low > 77

Not shown: 0 genomes with orthologs for PS417_23375 only; 4 genomes with orthologs for PS417_23380 only