Conservation of cofitness between PS417_04175 and PS417_02140 in Pseudomonas simiae WCS417

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_04175 peptidase 1.0 PS417_02140 hypothetical protein 0.19 14
Pseudomonas fluorescens SBW25-INTG 0.89 PFLU_RS04215 ClpXP protease specificity-enhancing factor 0.95 PFLU_RS02195 YdiU family protein low > 109
Pseudomonas fluorescens SBW25 0.89 PFLU_RS04215 ClpXP protease specificity-enhancing factor 0.95 PFLU_RS02195 YdiU family protein low > 109
Pseudomonas sp. S08-1 0.78 OH686_08370 Stringent starvation protein B 0.75 OH686_09805 UPF0061 protein YdiU low > 80
Pseudomonas fluorescens FW300-N2E2 0.76 Pf6N2E2_5341 Stringent starvation protein B 0.84 Pf6N2E2_3692 Selenoprotein O and cysteine-containing homologs 0.18 65
Pseudomonas fluorescens FW300-N2C3 0.76 AO356_17085 peptidase 0.85 AO356_09050 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N1B4 0.75 Pf1N1B4_958 Stringent starvation protein B 0.86 Pf1N1B4_1498 Selenoprotein O and cysteine-containing homologs low > 87
Pseudomonas syringae pv. syringae B728a 0.75 Psyr_4117 Stringent starvation protein B 0.81 Psyr_0494 Protein of unknown function UPF0061 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.75 Psyr_4117 Stringent starvation protein B 0.81 Psyr_0494 Protein of unknown function UPF0061 low > 86
Pseudomonas sp. RS175 0.75 PFR28_03602 Stringent starvation protein B 0.88 PFR28_05043 Protein adenylyltransferase SelO low > 88
Pseudomonas fluorescens GW456-L13 0.75 PfGW456L13_1638 Stringent starvation protein B 0.84 PfGW456L13_231 Selenoprotein O and cysteine-containing homologs low > 87
Pseudomonas fluorescens FW300-N2E3 0.75 AO353_15265 peptidase 0.86 AO353_12770 hypothetical protein low > 101
Pseudomonas stutzeri RCH2 0.74 Psest_3275 Stringent starvation protein B 0.69 Psest_0396 Uncharacterized conserved protein low > 67
Pseudomonas putida KT2440 0.73 PP_1321 ClpXP protease specificity-enhancing factor 0.80 PP_5068 conserved protein of unknown function, UPF0061 family low > 96
Marinobacter adhaerens HP15 0.52 HP15_549 stringent starvation protein B 0.43 HP15_1144 protein belonging to uncharacterized protein family UPF0061 low > 73
Pectobacterium carotovorum WPP14 0.48 HER17_RS19930 ClpXP protease specificity-enhancing factor 0.47 HER17_RS08850 YdiU family protein low > 75
Vibrio cholerae E7946 ATCC 55056 0.47 CSW01_03065 ClpXP protease specificity-enhancing factor 0.46 CSW01_09655 SELO family protein low > 62
Shewanella amazonensis SB2B 0.47 Sama_3017 ClpXP protease specificity-enhancing factor (RefSeq) 0.33 Sama_2755 hypothetical protein (RefSeq) low > 62
Pantoea sp. MT58 0.47 IAI47_17230 ClpXP protease specificity-enhancing factor 0.46 IAI47_10920 YdiU family protein low > 76
Erwinia tracheiphila SCR3 0.46 LU632_RS21325 sspB ClpXP protease specificity-enhancing factor 0.44 LU632_RS10980 YdiU family protein low > 74
Klebsiella michiganensis M5al 0.46 BWI76_RS25330 stringent starvation protein B 0.48 BWI76_RS17085 hypothetical protein — —
Enterobacter sp. TBS_079 0.46 MPMX20_04132 Stringent starvation protein B 0.48 MPMX20_01907 Protein adenylyltransferase SelO low > 85
Shewanella sp. ANA-3 0.45 Shewana3_0605 ClpXP protease specificity-enhancing factor (RefSeq) 0.45 Shewana3_3841 hypothetical protein (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.45 MIT1002_00818 Stringent starvation protein B 0.19 MIT1002_03272 hypothetical protein low > 70
Serratia liquefaciens MT49 0.45 IAI46_22360 ClpXP protease specificity-enhancing factor 0.47 IAI46_11065 YdiU family protein low > 86
Shewanella oneidensis MR-1 0.45 SO0612 sspB stringent starvation protein b (NCBI ptt file) 0.45 SO0330 conserved hypothetical protein (NCBI ptt file) — —
Dickeya dianthicola ME23 0.44 DZA65_RS01620 ClpXP protease specificity-enhancing factor 0.46 DZA65_RS13470 YdiU family protein low > 75
Dickeya dadantii 3937 0.44 DDA3937_RS01650 ClpXP protease specificity-enhancing factor 0.46 DDA3937_RS12935 YdiU family protein low > 74
Dickeya dianthicola 67-19 0.44 HGI48_RS01550 ClpXP protease specificity-enhancing factor 0.45 HGI48_RS13010 YdiU family protein low > 71
Shewanella loihica PV-4 0.43 Shew_0574 ClpXP protease specificity-enhancing factor (RefSeq) 0.44 Shew_0262 hypothetical protein (RefSeq) — —
Xanthomonas campestris pv. campestris strain 8004 0.41 Xcc-8004.2232.1 Stringent starvation protein B 0.34 Xcc-8004.2272.1 Selenoprotein O and cysteine-containing homologs low > 74
Dechlorosoma suillum PS 0.41 Dsui_1816 stringent starvation protein B 0.31 Dsui_1465 hypothetical protein low > 51
Rhodanobacter denitrificans MT42 0.40 LRK55_RS13500 ClpXP protease specificity-enhancing factor 0.37 LRK55_RS15710 YdiU family protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.40 LRK54_RS13785 ClpXP protease specificity-enhancing factor 0.37 LRK54_RS15955 YdiU family protein low > 59
Ralstonia solanacearum GMI1000 0.39 RS_RS14655 ClpXP protease specificity-enhancing factor 0.45 RS_RS08830 YdiU family protein low > 80
Paraburkholderia bryophila 376MFSha3.1 0.39 H281DRAFT_05673 stringent starvation protein B 0.46 H281DRAFT_00914 Uncharacterized conserved protein YdiU, UPF0061 family low > 103
Ralstonia solanacearum UW163 0.39 UW163_RS06905 ClpXP protease specificity-enhancing factor 0.45 UW163_RS14490 YdiU family protein — —
Ralstonia solanacearum IBSBF1503 0.39 RALBFv3_RS06710 ClpXP protease specificity-enhancing factor 0.45 RALBFv3_RS01180 YdiU family protein low > 76
Ralstonia solanacearum PSI07 0.37 RPSI07_RS10525 ClpXP protease specificity-enhancing factor 0.45 RPSI07_RS16295 YdiU family protein low > 81
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS20225 starvation protein B 0.47 HSERO_RS11220 hypothetical protein — —
Cupriavidus basilensis FW507-4G11 0.37 RR42_RS18805 peptidase 0.45 RR42_RS11160 hypothetical protein low > 128
Castellaniella sp019104865 MT123 0.37 ABCV34_RS12615 ClpXP protease specificity-enhancing factor 0.36 ABCV34_RS04315 YdiU family protein low > 48
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS02365 ClpXP protease specificity-enhancing factor 0.45 ABZR87_RS12630 protein adenylyltransferase SelO low > 80

Not shown: 1 genomes with orthologs for PS417_04175 only; 33 genomes with orthologs for PS417_02140 only