Conservation of cofitness between PS417_27705 and PS417_19740 in Pseudomonas simiae WCS417

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_27705 amino acid dehydrogenase 1.0 PS417_19740 flagellar biosynthesis protein flip 0.26 12
Pseudomonas fluorescens SBW25 0.98 PFLU_RS29380 D-amino acid dehydrogenase 0.99 PFLU_RS21710 flagellar type III secretion system pore protein FliP low > 109
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS29380 D-amino acid dehydrogenase 0.99 PFLU_RS21710 flagellar type III secretion system pore protein FliP low > 109
Pseudomonas fluorescens FW300-N2E2 0.95 Pf6N2E2_4391 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.88 Pf6N2E2_2580 Flagellar biosynthesis protein FliP low > 103
Pseudomonas fluorescens FW300-N2E3 0.95 AO353_09155 amino acid dehydrogenase 0.95 AO353_18745 flagellar biosynthesis protein flip low > 101
Pseudomonas fluorescens GW456-L13 0.95 PfGW456L13_812 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.93 PfGW456L13_4339 Flagellar biosynthesis protein FliP low > 87
Pseudomonas fluorescens FW300-N1B4 0.95 Pf1N1B4_2144 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.89 Pf1N1B4_3618 Flagellar biosynthesis protein FliP — —
Pseudomonas fluorescens FW300-N2C3 0.95 AO356_12620 amino acid dehydrogenase 0.88 AO356_03770 flagellar biosynthesis protein flip low > 104
Pseudomonas sp. RS175 0.94 PFR28_04399 D-amino acid dehydrogenase 1 0.89 PFR28_00845 Flagellar biosynthetic protein FliP low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.92 Psyr_0235 D-amino acid dehydrogenase small subunit 0.86 Psyr_3444 Flagellar transport protein FliP low > 86
Pseudomonas syringae pv. syringae B728a 0.92 Psyr_0235 D-amino acid dehydrogenase small subunit 0.86 Psyr_3444 Flagellar transport protein FliP — —
Pseudomonas putida KT2440 0.90 PP_5270 D-amino-acid:quinone oxidoreductase (deaminating) 0.83 PP_4355 flagellar export apparatus subunit low > 96
Pseudomonas sp. S08-1 0.89 OH686_13685 D-amino acid dehydrogenase 0.87 OH686_02770 flagellar biosynthetic protein FliP low > 80
Pseudomonas stutzeri RCH2 0.86 Psest_3793 D-alanine dehydrogenase (EC 1.4.99.-) (from data) 0.83 Psest_1732 flagellar biosynthetic protein FliP low > 67
Rhodanobacter denitrificans FW104-10B01 0.76 LRK54_RS00590 D-amino acid dehydrogenase 0.49 LRK54_RS13545 flagellar type III secretion system pore protein FliP low > 59
Rhodanobacter sp. FW510-T8 0.76 OKGIIK_06665 dadA D-amino acid dehydrogenase small subunit 0.47 OKGIIK_02795 fliP flagellar type III secretion system pore protein FliP low > 52
Rhodanobacter denitrificans MT42 0.76 LRK55_RS00360 D-amino acid dehydrogenase 0.49 LRK55_RS13285 flagellar type III secretion system pore protein FliP low > 63
Herbaspirillum seropedicae SmR1 0.66 HSERO_RS08375 D-amino acid dehydrogenase small subunit 0.52 HSERO_RS10260 flagellar biosynthesis protein FliP low > 78
Paraburkholderia graminis OAS925 0.65 ABIE53_003133 D-amino-acid dehydrogenase 0.55 ABIE53_000084 flagellar biosynthetic protein FliP low > 113
Ralstonia solanacearum UW163 0.65 UW163_RS15940 D-amino acid dehydrogenase small subunit 0.55 UW163_RS17520 flagellar biosynthetic protein FliP — —
Ralstonia solanacearum IBSBF1503 0.65 RALBFv3_RS13870 D-amino acid dehydrogenase small subunit 0.55 RALBFv3_RS21665 flagellar biosynthetic protein FliP low > 76
Ralstonia sp. UNC404CL21Col 0.64 ABZR87_RS09560 D-amino acid dehydrogenase 0.55 ABZR87_RS22210 flagellar type III secretion system pore protein FliP low > 80
Ralstonia solanacearum GMI1000 0.64 RS_RS04605 D-amino acid dehydrogenase small subunit 0.55 RS_RS18960 flagellar biosynthetic protein FliP low > 80
Pantoea sp. MT58 0.64 IAI47_08890 D-amino acid dehydrogenase 0.55 IAI47_07980 flagellar type III secretion system pore protein FliP low > 76
Ralstonia solanacearum PSI07 0.64 RPSI07_RS19600 D-amino acid dehydrogenase small subunit 0.55 RPSI07_RS01460 flagellar biosynthetic protein FliP low > 81
Paraburkholderia sabiae LMG 24235 0.63 QEN71_RS04190 D-amino acid dehydrogenase 0.55 QEN71_RS28845 flagellar type III secretion system pore protein FliP low > 153
Variovorax sp. SCN45 0.63 GFF1773 D-amino acid dehydrogenase (EC 1.4.99.6) 0.54 GFF5740 Flagellar biosynthesis protein FliP — —
Serratia liquefaciens MT49 0.63 IAI46_14460 D-amino acid dehydrogenase 0.55 IAI46_15890 flagellar type III secretion system pore protein FliP low > 86
Dickeya dianthicola ME23 0.62 DZA65_RS11540 D-amino acid dehydrogenase 0.53 DZA65_RS13945 flagellar type III secretion system pore protein FliP low > 75
Cupriavidus basilensis FW507-4G11 0.62 RR42_RS04585 amino acid dehydrogenase 0.53 RR42_RS23360 flagellar biosynthesis protein flip low > 128
Rahnella sp. WP5 0.62 EX31_RS10485 D-amino acid dehydrogenase 0.50 EX31_RS09590 flagellar type III secretion system pore protein FliP low > 89
Dickeya dadantii 3937 0.62 DDA3937_RS11170 D-amino acid dehydrogenase 0.54 DDA3937_RS13415 flagellar type III secretion system pore protein FliP low > 74
Dickeya dianthicola 67-19 0.62 HGI48_RS11195 D-amino acid dehydrogenase 0.53 HGI48_RS13460 flagellar type III secretion system pore protein FliP low > 71
Enterobacter asburiae PDN3 0.62 EX28DRAFT_0766 Glycine/D-amino acid oxidases (deaminating) 0.55 EX28DRAFT_0606 flagellar biosynthetic protein FliP low > 76
Escherichia coli ECRC101 0.61 OKFHMN_28290 dadA D-amino acid dehydrogenase 0.56 OKFHMN_25665 fliP flagellar type III secretion system pore protein FliP — —
Escherichia coli ECRC102 0.61 NIAGMN_27930 dadA D-amino acid dehydrogenase 0.56 NIAGMN_02390 fliP flagellar type III secretion system pore protein FliP — —
Escherichia coli ECRC62 0.61 BNILDI_18890 dadA D-amino acid dehydrogenase 0.56 BNILDI_15085 fliP flagellar type III secretion system pore protein FliP — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_02500 D-amino acid dehydrogenase 0.55 OHPLBJKB_01781 Flagellar biosynthetic protein FliP low > 73
Escherichia fergusonii Becca 0.61 EFB2_02743 D-amino acid dehydrogenase 0.55 EFB2_01998 Flagellar biosynthetic protein FliP low > 86
Escherichia coli ECOR27 0.61 NOLOHH_20725 dadA D-amino acid dehydrogenase 0.56 NOLOHH_16295 fliP flagellar type III secretion system pore protein FliP — —
Escherichia coli ECOR38 0.61 HEPCGN_24750 dadA D-amino acid dehydrogenase 0.55 HEPCGN_04025 fliP flagellar type III secretion system pore protein FliP low > 85
Escherichia coli Nissle 1917 0.61 ECOLIN_RS07185 D-amino acid dehydrogenase 0.55 ECOLIN_RS11110 flagellar type III secretion system pore protein FliP — —
Escherichia coli ECRC99 0.61 KEDOAH_25305 dadA D-amino acid dehydrogenase 0.56 KEDOAH_02430 fliP flagellar type III secretion system pore protein FliP — —
Escherichia coli BW25113 0.61 b1189 dadA D-amino acid dehydrogenase (quinone) DadA (EC 1.4.5.1) (from data) 0.56 b1948 fliP flagellar biosynthesis protein P (NCBI) low > 76
Escherichia coli ECRC98 0.61 JDDGAC_06220 dadA D-amino acid dehydrogenase 0.56 JDDGAC_00250 fliP flagellar type III secretion system pore protein FliP — —
Escherichia coli ECRC101 0.61 MCAODC_21880 dadA D-amino acid dehydrogenase 0.56 MCAODC_19730 fliP flagellar type III secretion system pore protein FliP — —
Enterobacter sp. TBS_079 0.61 MPMX20_02699 D-amino acid dehydrogenase 0.55 MPMX20_02945 Flagellar biosynthetic protein FliP low > 85
Pectobacterium carotovorum WPP14 0.61 HER17_RS11170 D-amino acid dehydrogenase 0.49 HER17_RS08230 flagellar type III secretion system pore protein FliP low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF2804 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.54 GFF4008 Flagellar biosynthesis protein FliP low > 78
Erwinia tracheiphila SCR3 0.60 LU632_RS13070 D-amino acid dehydrogenase 0.51 LU632_RS10525 fliP flagellar type III secretion system pore protein FliP low > 74
Azospirillum sp. SherDot2 0.59 MPMX19_06097 D-amino acid dehydrogenase 1 0.45 MPMX19_00858 Flagellar biosynthetic protein FliP low > 112
Agrobacterium fabrum C58 0.58 Atu3293 D-amino acid dehydrogenase small subunit 0.41 Atu0546 flagellar biosynthetic protein low > 89
Azospirillum brasilense Sp245 0.58 AZOBR_RS08020 D-alanine dehydrogenase (EC 1.4.99.-) (from data) 0.44 AZOBR_RS32035 flagellar biosynthesis protein FliP — —
Castellaniella sp019104865 MT123 0.56 ABCV34_RS10810 D-amino acid dehydrogenase 0.55 ABCV34_RS05695 flagellar type III secretion system pore protein FliP 0.71 47
Dinoroseobacter shibae DFL-12 0.54 Dshi_0558 D-amino-acid dehydrogenase (RefSeq) 0.36 Dshi_3267 flagellar biosynthetic protein FliP (RefSeq) low > 64
Magnetospirillum magneticum AMB-1 0.40 AMB_RS14080 D-amino-acid dehydrogenase 0.44 AMB_RS03145 flagellar biosynthetic protein FliP — —
Dechlorosoma suillum PS 0.40 Dsui_0501 glycine/D-amino acid oxidase, deaminating 0.40 Dsui_1746 flagellar biosynthetic protein FliP — —
Acidovorax sp. GW101-3H11 0.39 Ac3H11_832 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.55 Ac3H11_1414 Flagellar biosynthesis protein FliP low > 79
Marinobacter adhaerens HP15 0.38 HP15_2610 D-amino acid dehydrogenase small subunit 0.65 HP15_2312 flagellar biosynthesis protein FliP low > 73
Rhodospirillum rubrum S1H 0.38 Rru_A1546 FAD dependent oxidoreductase (NCBI) 0.39 Rru_A2830 Flagellar transport protein FliP (NCBI) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF1973 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.55 GFF1461 Flagellar biosynthesis protein FliP low > 90
Dyella japonica UNC79MFTsu3.2 0.17 ABZR86_RS08930 FAD-dependent oxidoreductase 0.55 ABZR86_RS20230 flagellar type III secretion system pore protein FliP — —

Not shown: 12 genomes with orthologs for PS417_27705 only; 12 genomes with orthologs for PS417_19740 only