Conservation of cofitness between Psest_0175 and Psest_3575 in Pseudomonas stutzeri RCH2

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0175 Xaa-Pro aminopeptidase 1.0 Psest_3575 Arabinose efflux permease 0.35 18
Pseudomonas sp. S08-1 0.93 OH686_11205 Xaa-Pro aminopeptidase 0.73 OH686_15500 Inner membrane transport protein YajR 0.74 30
Pseudomonas fluorescens FW300-N1B4 0.85 Pf1N1B4_2229 Xaa-Pro aminopeptidase (EC 3.4.11.9) 0.75 Pf1N1B4_2612 Putative transport protein low > 87
Pseudomonas putida KT2440 0.85 PP_5200 proline aminopeptidase P II 0.72 PP_0484 transporter of an unknown substrate low > 96
Pseudomonas fluorescens FW300-N2E2 0.83 Pf6N2E2_4480 Xaa-Pro aminopeptidase (EC 3.4.11.9) 0.71 Pf6N2E2_4889 Putative transport protein low > 103
Pseudomonas fluorescens FW300-N2E3 0.83 AO353_08760 Xaa-Pro aminopeptidase 0.73 AO353_06850 MFS transporter 0.37 52
Pseudomonas simiae WCS417 0.83 PS417_27285 Xaa-Pro aminopeptidase 0.73 PS417_25390 MFS transporter low > 88
Pseudomonas syringae pv. syringae B728a 0.83 Psyr_0321 aminopeptidase P, Metallo peptidase, MEROPS family M24B 0.75 Psyr_4519 General substrate transporter:Major facilitator superfamily low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.83 Psyr_0321 aminopeptidase P, Metallo peptidase, MEROPS family M24B 0.75 Psyr_4519 General substrate transporter:Major facilitator superfamily low > 86
Pseudomonas fluorescens SBW25 0.83 PFLU_RS28945 Xaa-Pro aminopeptidase 0.73 PFLU_RS27020 MFS transporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.83 PFLU_RS28945 Xaa-Pro aminopeptidase 0.73 PFLU_RS27020 MFS transporter low > 109
Pseudomonas sp. RS175 0.83 PFR28_04321 Xaa-Pro aminopeptidase 0.73 PFR28_03973 Inner membrane transport protein YajR low > 88
Pseudomonas fluorescens FW300-N2C3 0.83 AO356_13010 Xaa-Pro aminopeptidase 0.71 AO356_14790 MFS transporter low > 104
Pseudomonas fluorescens GW456-L13 0.83 PfGW456L13_896 Xaa-Pro aminopeptidase (EC 3.4.11.9) 0.76 PfGW456L13_1284 Putative transport protein low > 87
Marinobacter adhaerens HP15 0.68 HP15_3203 proline aminopeptidase P II 0.45 HP15_407 transporter, major facilitator family low > 73
Kangiella aquimarina DSM 16071 0.56 B158DRAFT_0533 Xaa-Pro aminopeptidase 0.30 B158DRAFT_0886 Arabinose efflux permease low > 40
Rhodanobacter denitrificans MT42 0.54 LRK55_RS11420 aminopeptidase P N-terminal domain-containing protein 0.26 LRK55_RS05000 MFS transporter 0.68 62
Rhodanobacter denitrificans FW104-10B01 0.54 LRK54_RS11695 aminopeptidase P N-terminal domain-containing protein 0.26 LRK54_RS05220 MFS transporter low > 59
Rhodanobacter sp. FW510-T8 0.53 OKGIIK_12200 pepP Xaa-Pro aminopeptidase 0.26 OKGIIK_01605 putative arabinose efflux permease, MFS family low > 52
Acinetobacter radioresistens SK82 0.52 MPMX26_02286 Xaa-Pro aminopeptidase 0.41 MPMX26_02889 Inner membrane transport protein YajR low > 36
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS03510 proline aminopeptidase P II 0.34 HSERO_RS19800 membrane protein low > 78
Klebsiella michiganensis M5al 0.48 BWI76_RS23895 Xaa-Pro aminopeptidase 0.51 BWI76_RS06415 MFS transporter — —
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS02745 Xaa-Pro aminopeptidase 0.32 RR42_RS02150 membrane protein low > 128
Dickeya dadantii 3937 0.48 DDA3937_RS02395 Xaa-Pro aminopeptidase 0.54 DDA3937_RS05575 MFS transporter low > 74
Escherichia fergusonii Becca 0.48 EFB2_00994 Xaa-Pro aminopeptidase 0.52 EFB2_03630 Inner membrane transport protein YajR low > 86
Escherichia coli Nissle 1917 0.48 ECOLIN_RS16190 Xaa-Pro aminopeptidase 0.52 ECOLIN_RS02570 MFS transporter low > 52
Dickeya dianthicola ME23 0.47 DZA65_RS02455 Xaa-Pro aminopeptidase 0.53 DZA65_RS05960 MFS transporter low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.47 OHPLBJKB_00807 Xaa-Pro aminopeptidase 0.52 OHPLBJKB_03249 Inner membrane transport protein YajR low > 73
Escherichia coli BL21 0.47 ECD_02740 proline aminopeptidase P II 0.52 ECD_00375 putative transporter 0.59 26
Escherichia coli ECOR38 0.47 HEPCGN_18795 pepP Xaa-Pro aminopeptidase 0.52 HEPCGN_07015 yajR Inner membrane transport protein YajR low > 85
Dickeya dianthicola 67-19 0.47 HGI48_RS02350 Xaa-Pro aminopeptidase 0.53 HGI48_RS05635 MFS transporter low > 71
Escherichia coli ECOR27 0.47 NOLOHH_11415 pepP Xaa-Pro aminopeptidase 0.52 NOLOHH_01335 yajR Inner membrane transport protein YajR low > 57
Serratia liquefaciens MT49 0.47 IAI46_20875 Xaa-Pro aminopeptidase 0.56 IAI46_04960 MFS transporter low > 86
Escherichia coli ECRC62 0.47 BNILDI_09950 pepP Xaa-Pro aminopeptidase 0.52 BNILDI_22750 yajR Inner membrane transport protein YajR — —
Escherichia coli ECRC102 0.47 NIAGMN_17270 pepP Xaa-Pro aminopeptidase 0.52 NIAGMN_06440 yajR Inner membrane transport protein YajR — —
Escherichia coli ECRC101 0.47 MCAODC_10025 pepP Xaa-Pro aminopeptidase 0.52 MCAODC_27610 yajR Inner membrane transport protein YajR — —
Escherichia coli ECRC99 0.47 KEDOAH_08635 pepP Xaa-Pro aminopeptidase 0.52 KEDOAH_19580 yajR Inner membrane transport protein YajR — —
Escherichia coli ECRC98 0.47 JDDGAC_23145 pepP Xaa-Pro aminopeptidase 0.52 JDDGAC_12040 yajR Inner membrane transport protein YajR — —
Escherichia coli ECRC101 0.47 OKFHMN_19505 pepP Xaa-Pro aminopeptidase 0.52 OKFHMN_08385 yajR Inner membrane transport protein YajR — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.47 GFF3009 Xaa-Pro aminopeptidase (EC 3.4.11.9) 0.52 GFF4338 Putative transport protein low > 78
Escherichia coli BW25113 0.47 b2908 pepP proline aminopeptidase P II (NCBI) 0.52 b0427 yajR putative transport protein (VIMSS) 0.60 2
Pectobacterium carotovorum WPP14 0.47 HER17_RS19115 Xaa-Pro aminopeptidase 0.54 HER17_RS15900 MFS transporter low > 75
Enterobacter asburiae PDN3 0.47 EX28DRAFT_2960 Xaa-Pro aminopeptidase 0.50 EX28DRAFT_2544 Arabinose efflux permease low > 76
Ralstonia solanacearum PSI07 0.47 RPSI07_RS21505 Xaa-Pro aminopeptidase 0.34 RPSI07_RS22060 MFS transporter — —
Pantoea sp. MT58 0.47 IAI47_03750 Xaa-Pro aminopeptidase 0.53 IAI47_14705 MFS transporter 0.55 43
Enterobacter sp. TBS_079 0.46 MPMX20_03767 Xaa-Pro aminopeptidase 0.51 MPMX20_01018 Inner membrane transport protein YajR 0.40 16
Ralstonia solanacearum GMI1000 0.46 RS_RS02535 Xaa-Pro aminopeptidase 0.34 RS_RS02085 MFS transporter — —
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS07665 aminopeptidase P N-terminal domain-containing protein 0.33 ABZR87_RS07125 MFS transporter low > 80
Ralstonia solanacearum UW163 0.46 UW163_RS01875 Xaa-Pro aminopeptidase 0.34 UW163_RS02340 MFS transporter — —
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_04247 aminopeptidase P Metallo peptidase. MEROPS family M24B 0.33 H281DRAFT_01912 Predicted arabinose efflux permease, MFS family — —
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS11710 Xaa-Pro aminopeptidase 0.34 RALBFv3_RS11240 MFS transporter — —
Alteromonas macleodii MIT1002 0.46 MIT1002_02984 Xaa-Pro aminopeptidase 0.28 MIT1002_00180 Inner membrane transport protein YajR low > 70
Erwinia tracheiphila SCR3 0.46 LU632_RS05880 pepP Xaa-Pro aminopeptidase 0.50 LU632_RS18400 MFS transporter low > 74
Rahnella sp. WP5 0.45 EX31_RS21495 Xaa-Pro aminopeptidase 0.55 EX31_RS22195 MFS transporter low > 89
Paraburkholderia graminis OAS925 0.45 ABIE53_003487 Xaa-Pro aminopeptidase 0.34 ABIE53_000733 MFS family permease low > 113
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS16575 Xaa-Pro aminopeptidase 0.30 BPHYT_RS02975 membrane protein low > 109
Dechlorosoma suillum PS 0.45 Dsui_1591 Xaa-Pro aminopeptidase 0.37 Dsui_3480 arabinose efflux permease family protein — —
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS26760 aminopeptidase P N-terminal domain-containing protein 0.34 QEN71_RS01830 MFS transporter low > 153
Acidovorax sp. GW101-3H11 0.44 Ac3H11_652 Xaa-Pro aminopeptidase (EC 3.4.11.9) 0.28 Ac3H11_4384 putative transport protein low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF2485 Xaa-Pro aminopeptidase (EC 3.4.11.9) 0.29 GFF2754 putative transport protein low > 90
Shewanella amazonensis SB2B 0.39 Sama_1534 xaa-pro aminopeptidase (RefSeq) 0.42 Sama_0515 transporter, putative (RefSeq) low > 62
Shewanella loihica PV-4 0.39 Shew_2358 peptidase M24 (RefSeq) 0.40 Shew_0534 major facilitator transporter (RefSeq) low > 60

Not shown: 19 genomes with orthologs for Psest_0175 only; 3 genomes with orthologs for Psest_3575 only