Conservation of cofitness between Psest_3988 and Psest_3384 in Pseudomonas stutzeri RCH2

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3988 phosphoenolpyruvate carboxykinase (ATP) 1.0 Psest_3384 glutamate 5-kinase 0.47 5
Pseudomonas sp. S08-1 0.83 OH686_11060 phosphoenolpyruvate carboxykinase (ATP) 0.82 OH686_16305 Glutamate 5-kinase / RNA-binding C-terminal domain PUA 0.49 72
Pseudomonas fluorescens FW300-N2C3 0.82 AO356_10140 phosphoenolpyruvate carboxykinase [ATP] 0.79 AO356_15815 gamma-glutamyl kinase low > 104
Pseudomonas fluorescens FW300-N2E2 0.82 Pf6N2E2_3899 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) 0.79 Pf6N2E2_5103 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.81 Psyr_0168 Phosphoenolpyruvate carboxykinase (ATP) 0.78 Psyr_0704 glutamate 5-kinase low > 86
Pseudomonas syringae pv. syringae B728a 0.81 Psyr_0168 Phosphoenolpyruvate carboxykinase (ATP) 0.78 Psyr_0704 glutamate 5-kinase 0.57 32
Pseudomonas sp. RS175 0.81 PFR28_04874 Phosphoenolpyruvate carboxykinase (ATP) 0.79 PFR28_03769 Glutamate 5-kinase — —
Pseudomonas fluorescens FW300-N1B4 0.81 Pf1N1B4_1779 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) 0.82 Pf1N1B4_2800 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA — —
Pseudomonas fluorescens GW456-L13 0.81 PfGW456L13_420 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) 0.78 PfGW456L13_1472 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA low > 87
Pseudomonas fluorescens FW300-N2E3 0.80 AO353_11775 phosphoenolpyruvate carboxykinase [ATP] 0.79 AO353_14115 gamma-glutamyl kinase low > 101
Pseudomonas simiae WCS417 0.79 PS417_01210 hypothetical protein 0.83 PS417_23545 gamma-glutamyl kinase low > 88
Pseudomonas fluorescens SBW25 0.79 PFLU_RS01320 phosphoenolpyruvate carboxykinase 0.83 PFLU_RS25360 glutamate 5-kinase low > 109
Pseudomonas fluorescens SBW25-INTG 0.79 PFLU_RS01320 phosphoenolpyruvate carboxykinase 0.83 PFLU_RS25360 glutamate 5-kinase low > 109
Marinobacter adhaerens HP15 0.74 HP15_3498 phosphoenolpyruvate carboxykinase (ATP) 0.62 HP15_508 gamma-glutamyl kinase — —
Shewanella oneidensis MR-1 0.71 SO0162 pckA phosphoenolpyruvate carboxykinase (ATP) (NCBI ptt file) 0.37 SO1121 proB glutamate 5-kinase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.71 Shew_3623 phosphoenolpyruvate carboxykinase (RefSeq) 0.41 Shew_2848 gamma-glutamyl kinase (RefSeq) 0.36 48
Shewanella sp. ANA-3 0.71 Shewana3_0147 phosphoenolpyruvate carboxykinase (RefSeq) 0.37 Shewana3_0954 gamma-glutamyl kinase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.71 Sama_0165 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (from data) 0.40 Sama_2516 gamma-glutamyl kinase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.70 MIT1002_03972 Phosphoenolpyruvate carboxykinase [ATP] 0.32 MIT1002_04056 Glutamate 5-kinase low > 70
Agrobacterium fabrum C58 0.45 Atu0035 phosphoenolpyruvate carboxykinase 0.41 Atu2780 gamma-glutamyl kinase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.44 CA264_05270 phosphoenolpyruvate carboxykinase (ATP) 0.27 CA264_07725 glutamate 5-kinase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.44 Echvi_2957 phosphoenolpyruvate carboxykinase (ATP) 0.28 Echvi_4033 glutamate 5-kinase (EC 2.7.2.11) (from data) — —
Sinorhizobium meliloti 1021 0.43 SMc02562 phosphoenolpyruvate carboxykinase 0.41 SMc03776 gamma-glutamyl kinase low > 103
Rhodopseudomonas palustris CGA009 0.43 TX73_001865 phosphoenolpyruvate carboxykinase 0.39 TX73_000850 glutamate 5-kinase — —
Rhizobium sp. OAE497 0.43 ABIE40_RS19415 phosphoenolpyruvate carboxykinase 0.43 ABIE40_RS18920 glutamate 5-kinase low > 107
Sphingomonas koreensis DSMZ 15582 0.43 Ga0059261_0913 phosphoenolpyruvate carboxykinase (ATP) 0.30 Ga0059261_3512 glutamate 5-kinase (EC 2.7.2.11) (from data) low > 68
Pedobacter sp. GW460-11-11-14-LB5 0.42 CA265_RS23490 phosphoenolpyruvate carboxykinase (ATP) 0.27 CA265_RS20855 glutamate 5-kinase (EC 2.7.2.11) (from data) low > 88
Dinoroseobacter shibae DFL-12 0.42 Dshi_0213 Phosphoenolpyruvate carboxykinase (ATP) (RefSeq) 0.36 Dshi_1467 glutamate 5-kinase (RefSeq) — —
Bosea sp. OAE506 0.41 ABIE41_RS02665 phosphoenolpyruvate carboxykinase 0.37 ABIE41_RS07585 glutamate 5-kinase — —
Phaeobacter inhibens DSM 17395 0.41 PGA1_c01140 phosphoenolpyruvate carboxykinase 0.36 PGA1_c15510 glutamate 5-kinase ProB 0.58 51
Pantoea sp. MT58 0.37 IAI47_01830 phosphoenolpyruvate carboxykinase (ATP) 0.38 IAI47_15120 glutamate 5-kinase low > 76
Escherichia coli ECOR38 0.36 HEPCGN_15865 pckA phosphoenolpyruvate carboxykinase (ATP) 0.38 HEPCGN_07780 proB Glutamate 5-kinase low > 85
Escherichia coli ECRC62 0.36 BNILDI_02685 pckA phosphoenolpyruvate carboxykinase (ATP) 0.38 BNILDI_00245 proB Glutamate 5-kinase — —
Escherichia coli Nissle 1917 0.36 ECOLIN_RS19435 phosphoenolpyruvate carboxykinase (ATP) 0.38 ECOLIN_RS01825 glutamate 5-kinase low > 52
Escherichia coli BW25113 0.36 b3403 pck phosphoenolpyruvate carboxykinase (NCBI) 0.38 b0242 proB gamma-glutamyl kinase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_00300 Phosphoenolpyruvate carboxykinase (ATP) 0.38 OHPLBJKB_03398 Glutamate 5-kinase low > 73
Escherichia coli ECOR27 0.36 NOLOHH_08835 pckA phosphoenolpyruvate carboxykinase (ATP) 0.38 NOLOHH_02050 proB Glutamate 5-kinase low > 57
Escherichia fergusonii Becca 0.36 EFB2_00425 Phosphoenolpyruvate carboxykinase (ATP) 0.38 EFB2_03778 Glutamate 5-kinase low > 86
Escherichia coli BL21 0.36 ECD_03255 phosphoenolpyruvate carboxykinase [ATP] 0.38 ECD_00239 gamma-glutamate kinase low > 60
Vibrio cholerae E7946 ATCC 55056 0.36 CSW01_13810 phosphoenolpyruvate carboxykinase (ATP) 0.36 CSW01_11575 glutamate 5-kinase low > 62
Escherichia coli ECRC98 0.36 JDDGAC_20675 pckA phosphoenolpyruvate carboxykinase (ATP) 0.38 JDDGAC_13300 proB Glutamate 5-kinase — —
Escherichia coli ECRC101 0.36 MCAODC_07575 pckA phosphoenolpyruvate carboxykinase (ATP) 0.38 MCAODC_00195 proB Glutamate 5-kinase — —
Escherichia coli ECRC102 0.36 NIAGMN_14815 pckA phosphoenolpyruvate carboxykinase (ATP) 0.38 NIAGMN_07535 proB Glutamate 5-kinase — —
Escherichia coli ECRC99 0.36 KEDOAH_11095 pckA phosphoenolpyruvate carboxykinase (ATP) 0.38 KEDOAH_18480 proB Glutamate 5-kinase — —
Escherichia coli ECRC101 0.36 OKFHMN_17045 pckA phosphoenolpyruvate carboxykinase (ATP) 0.38 OKFHMN_09675 proB Glutamate 5-kinase — —
Serratia liquefaciens MT49 0.36 IAI46_10700 phosphoenolpyruvate carboxykinase (ATP) 0.36 IAI46_04430 glutamate 5-kinase 0.41 70
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF615 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) 0.38 GFF4114 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA low > 78
Enterobacter sp. TBS_079 0.36 MPMX20_04290 Phosphoenolpyruvate carboxykinase (ATP) 0.38 MPMX20_00927 Glutamate 5-kinase 0.23 57
Dickeya dianthicola ME23 0.36 DZA65_RS20830 phosphoenolpyruvate carboxykinase (ATP) 0.34 DZA65_RS17695 glutamate 5-kinase low > 75
Enterobacter asburiae PDN3 0.36 EX28DRAFT_4140 phosphoenolpyruvate carboxykinase (ATP) 0.37 EX28DRAFT_2651 glutamate 5-kinase low > 76
Dickeya dianthicola 67-19 0.36 HGI48_RS19740 phosphoenolpyruvate carboxykinase (ATP) 0.34 HGI48_RS16605 glutamate 5-kinase low > 71
Erwinia tracheiphila SCR3 0.36 LU632_RS22930 pckA phosphoenolpyruvate carboxykinase (ATP) 0.37 LU632_RS01185 proB glutamate 5-kinase low > 74
Rahnella sp. WP5 0.35 EX31_RS04780 phosphoenolpyruvate carboxykinase (ATP) 0.37 EX31_RS20980 glutamate 5-kinase low > 89
Klebsiella michiganensis M5al 0.35 BWI76_RS26155 phosphoenolpyruvate carboxykinase (ATP) 0.37 BWI76_RS05840 glutamate 5-kinase low > 92
Dickeya dadantii 3937 0.35 DDA3937_RS19610 phosphoenolpyruvate carboxykinase (ATP) 0.34 DDA3937_RS16535 glutamate 5-kinase low > 74
Pectobacterium carotovorum WPP14 0.35 HER17_RS01710 phosphoenolpyruvate carboxykinase (ATP) 0.35 HER17_RS04700 glutamate 5-kinase low > 75
Bacteroides thetaiotaomicron VPI-5482 0.34 BT2790 phosphoenolpyruvate carboxykinase [ATP] (NCBI ptt file) 0.25 BT3719 glutamate 5-kinase (EC 2.7.2.11) (from data) — —
Phocaeicola dorei CL03T12C01 0.34 ABI39_RS06685 phosphoenolpyruvate carboxykinase (ATP) 0.25 ABI39_RS02880 glutamate 5-kinase — —
Phocaeicola vulgatus CL09T03C04 0.34 HMPREF1058_RS10065 phosphoenolpyruvate carboxykinase (ATP) 0.26 HMPREF1058_RS08650 glutamate 5-kinase — —
Parabacteroides merdae CL09T00C40 0.33 HMPREF1078_RS07235 phosphoenolpyruvate carboxykinase (ATP) 0.25 HMPREF1078_RS10650 glutamate 5-kinase — —
Bacteroides stercoris CC31F 0.33 HMPREF1181_RS01170 phosphoenolpyruvate carboxykinase (ATP) 0.24 HMPREF1181_RS03325 glutamate 5-kinase — —
Bacteroides ovatus ATCC 8483 0.32 BACOVA_02011 phosphoenolpyruvate carboxykinase (ATP) 0.25 BACOVA_03537 glutamate 5-kinase — —

Not shown: 2 genomes with orthologs for Psest_3988 only; 38 genomes with orthologs for Psest_3384 only