| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas stutzeri RCH2 | 1.0 | Psest_2950 | | putative NAD(P)H quinone oxidoreductase, PIG3 family | 1.0 | Psest_2530 | | cytochrome c oxidase, cbb3-type, subunit III | 0.42 | 10 |
| Pseudomonas sp. RS175 | 0.76 | PFR28_03168 | | Phthiocerol synthesis polyketide synthase type I PpsC | 0.74 | PFR28_01088 | | Cbb3-type cytochrome c oxidase subunit CcoP2 | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.75 | Pf6N2E2_5781 | | Oxidoreductase, zinc-binding | 0.74 | Pf6N2E2_2313 | | Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.74 | AO356_19340 | | NAD(P)H-quinone oxidoreductase | 0.75 | AO356_02440 | | cytochrome C oxidase Cbb3 | low | > 104 |
| Pseudomonas fluorescens FW300-N1B4 | 0.74 | Pf1N1B4_3742 | | Oxidoreductase, zinc-binding | 0.74 | Pf1N1B4_3876 | | Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) | low | > 87 |
| Pseudomonas sp. S08-1 | 0.74 | OH686_19715 | | Quinone oxidoreductase | 0.72 | OH686_02185 | | cytochrome c oxidase, cbb3-type, subunit III | low | > 80 |
| Pseudomonas syringae pv. syringae B728a | 0.73 | Psyr_1600 | | Zinc-containing alcohol dehydrogenase superfamily | 0.64 | Psyr_3416 | | Cytochrome c oxidase cbb3-type, subunit III | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.73 | Psyr_1600 | | Zinc-containing alcohol dehydrogenase superfamily | 0.64 | Psyr_3416 | | Cytochrome c oxidase cbb3-type, subunit III | — | — |
| Pseudomonas fluorescens SBW25 | 0.73 | PFLU_RS09985 | | zinc-binding dehydrogenase | 0.73 | PFLU_RS22355 | | cytochrome-c oxidase, cbb3-type subunit III | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.73 | PFLU_RS09985 | | zinc-binding dehydrogenase | 0.73 | PFLU_RS22355 | | cytochrome-c oxidase, cbb3-type subunit III | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.73 | AO353_02435 | | NAD(P)H-quinone oxidoreductase | 0.76 | AO353_00620 | | cytochrome C oxidase Cbb3 | low | > 101 |
| Pseudomonas simiae WCS417 | 0.72 | PS417_09330 | | NAD(P)H-quinone oxidoreductase | 0.74 | PS417_20735 | | cytochrome Cbb3 | — | — |
| Pseudomonas putida KT2440 | 0.69 | PP_1720 | | Alcohol dehydrogenase, zinc-containing | 0.76 | PP_4253 | | cytochrome c oxidase subunit, cbb3-type | low | > 96 |
| Marinobacter adhaerens HP15 | 0.45 | HP15_1149 | | quinone oxidoreductase putative, PIG3 | 0.52 | HP15_2110 | | cytochrome c oxidase, cbb3-type, subunit III | — | — |
| Rhodospirillum rubrum S1H | 0.40 | Rru_A1056 | | Zinc-containing alcohol dehydrogenase superfamily (NCBI) | 0.27 | Rru_A3330 | | Cytochrome c oxidase cbb3-type, subunit III (NCBI) | — | — |
| Castellaniella sp019104865 MT123 | 0.38 | ABCV34_RS01245 | | NAD(P)H-quinone oxidoreductase | 0.44 | ABCV34_RS06855 | | cytochrome-c oxidase, cbb3-type subunit III | 0.55 | 8 |
| Azospirillum sp. SherDot2 | 0.37 | MPMX19_01406 | | Quinone oxidoreductase 1 | 0.26 | MPMX19_00209 | | Cbb3-type cytochrome c oxidase subunit FixP | low | > 112 |
| Azospirillum brasilense Sp245 | 0.37 | AZOBR_RS06200 | | NAD(P)H quinone oxidoreductase | 0.26 | AZOBR_RS01165 | | cytochrome CBB3 | — | — |
| Phaeobacter inhibens DSM 17395 | 0.36 | PGA1_c30350 | | putative quinone oxidoreductase | 0.29 | PGA1_c30090 | | cytochrome c oxidase subunit 3 | low | > 62 |
| Cupriavidus basilensis FW507-4G11 | 0.36 | RR42_RS05490 | | NAD(P)H-quinone oxidoreductase | 0.41 | RR42_RS12895 | | cytochrome oxidase subunit III | low | > 128 |
| Dinoroseobacter shibae DFL-12 | 0.36 | Dshi_0248 | | Quinone oxidoreductase putative PIG3 (RefSeq) | 0.29 | Dshi_0664 | | cytochrome c oxidase, cbb3-type, subunit III (RefSeq) | low | > 64 |
| Agrobacterium fabrum C58 | 0.35 | Atu0825 | | quinone oxidoreductase | 0.31 | Atu1534 | | cytochrome-c oxidase, FixP chain | low | > 89 |
| Herbaspirillum seropedicae SmR1 | 0.35 | HSERO_RS08800 | | NAD(P)H quinone oxidoreductase | 0.40 | HSERO_RS16040 | | cytochrome CBB3 | low | > 78 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.35 | GFF3678 | | Quinone oxidoreductase (EC 1.6.5.5) | 0.40 | GFF4138 | | Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) | low | > 90 |
| Caulobacter crescentus NA1000 Δfur | 0.35 | CCNA_03402 | | NAD(P)H quinone oxidoreductase, PIG3 family | 0.27 | CCNA_01470 | | cytochrome cbb3 oxidase, diheme subunit, membrane-bound ccoP | low | > 67 |
| Ralstonia solanacearum UW163 | 0.35 | UW163_RS10730 | | NAD(P)H-quinone oxidoreductase | 0.42 | UW163_RS13090 | | cytochrome-c oxidase, cbb3-type subunit III | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.35 | RALBFv3_RS02995 | | NAD(P)H-quinone oxidoreductase | 0.42 | RALBFv3_RS15630 | | cytochrome-c oxidase, cbb3-type subunit III | low | > 76 |
| Caulobacter crescentus NA1000 | 0.35 | CCNA_03402 | | NAD(P)H quinone oxidoreductase, PIG3 family | 0.27 | CCNA_01470 | | cytochrome cbb3 oxidase, diheme subunit, membrane-bound ccoP | low | > 66 |
| Variovorax sp. OAS795 | 0.35 | ABID97_RS20515 | | NAD(P)H-quinone oxidoreductase | 0.40 | ABID97_RS16210 | | cytochrome-c oxidase, cbb3-type subunit III | low | > 91 |
| Acidovorax sp. GW101-3H11 | 0.35 | Ac3H11_1455 | | Quinone oxidoreductase (EC 1.6.5.5) | 0.40 | Ac3H11_971 | | Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) | low | > 79 |
| Rhodopseudomonas palustris CGA009 | 0.34 | TX73_004720 | | NAD(P)H-quinone oxidoreductase | 0.32 | TX73_000085 | | cytochrome-c oxidase, cbb3-type subunit III | low | > 86 |
| Ralstonia solanacearum GMI1000 | 0.34 | RS_RS10365 | | NAD(P)H quinone oxidoreductase | 0.42 | RS_RS06410 | | cytochrome-c oxidase, cbb3-type subunit III | low | > 80 |
| Variovorax sp. SCN45 | 0.34 | GFF4747 | | Quinone oxidoreductase (EC 1.6.5.5) | 0.41 | GFF6961 | | Cytochrome c oxidase (cbb3-type) subunit CcoP (EC 1.9.3.1) | low | > 127 |
| Rhodanobacter sp. FW510-T8 | 0.33 | OKGIIK_07190 | | NAD(P)H-quinone oxidoreductase | 0.35 | OKGIIK_07670 | ccoP | cytochrome-c oxidase, cbb3-type subunit III | low | > 52 |
| Ralstonia sp. UNC404CL21Col | 0.33 | ABZR87_RS14900 | | NAD(P)H-quinone oxidoreductase | 0.44 | ABZR87_RS11160 | | cytochrome-c oxidase, cbb3-type subunit III | low | > 80 |
| Magnetospirillum magneticum AMB-1 | 0.33 | AMB_RS13480 | | NAD(P)H quinone oxidoreductase | 0.24 | AMB_RS22080 | | cytochrome-c oxidase, cbb3-type subunit III | — | — |
| Alteromonas macleodii MIT1002 | 0.33 | MIT1002_01689 | | Beta-ketoacyl-acyl-carrier-protein synthase I | 0.47 | MIT1002_02132 | | Cytochrome c oxidase subunit III | low | > 70 |
| Ralstonia solanacearum PSI07 | 0.33 | RPSI07_RS14315 | | NAD(P)H-quinone oxidoreductase | 0.42 | RPSI07_RS17725 | | cytochrome-c oxidase, cbb3-type subunit III | low | > 81 |
| Rhizobium sp. OAE497 | 0.32 | ABIE40_RS04545 | | NAD(P)H-quinone oxidoreductase | 0.32 | ABIE40_RS26155 | | cytochrome-c oxidase, cbb3-type subunit III | low | > 107 |
| Shewanella sp. ANA-3 | 0.32 | Shewana3_3581 | | response regulator receiver protein (RefSeq) | 0.47 | Shewana3_2110 | | cytochrome c oxidase, cbb3-type, subunit III (RefSeq) | low | > 73 |
| Shewanella amazonensis SB2B | 0.32 | Sama_0533 | | alcohol dehydrogenase, zinc-containing (RefSeq) | 0.46 | Sama_1794 | | cytochrome c oxidase, cbb3-type, subunit III (RefSeq) | low | > 62 |
| Dyella japonica UNC79MFTsu3.2 | 0.32 | ABZR86_RS09640 | | NAD(P)H-quinone oxidoreductase | 0.35 | ABZR86_RS04435 | | cytochrome-c oxidase, cbb3-type subunit III | low | > 74 |
| Sinorhizobium meliloti 1021 | 0.31 | SMc00034 | | oxidoreductase | 0.31 | SMa0769 | | FixP2 Diheme c-type cytochrome | low | > 103 |
| Shewanella oneidensis MR-1 | 0.31 | SO0640 | | alcohol dehydrogenase, zinc-containing (NCBI ptt file) | 0.47 | SO2361 | ccoP | cytochrome c oxidase, cbb3-type, subunit III (NCBI ptt file) | low | > 76 |
| Shewanella loihica PV-4 | 0.31 | Shew_3274 | | alcohol dehydrogenase (RefSeq) | 0.46 | Shew_1988 | | cytochrome c oxidase, cbb3-type, subunit III (RefSeq) | — | — |
Not shown: 15 genomes with orthologs for Psest_2950 only; 7 genomes with orthologs for Psest_2530 only