Conservation of cofitness between GFF3555 and GFF2477 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF3555 1,4-dihydroxy-2-naphthoyl-CoA hydrolase (EC 3.1.2.28) in menaquinone biosynthesis 1.0 GFF2477 Translation elongation factor LepA 0.51 6
Escherichia coli ECOR38 0.93 HEPCGN_05620 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.94 HEPCGN_20545 lepA translation elongation factor 4 low > 87
Escherichia coli ECOR27 0.93 NOLOHH_17755 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.94 NOLOHH_13075 lepA translation elongation factor 4 0.64 14
Escherichia coli Nissle 1917 0.93 ECOLIN_RS09425 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.94 ECOLIN_RS14540 translation elongation factor 4
Escherichia fergusonii Becca 0.93 EFB2_02306 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.94 EFB2_01327 Elongation factor 4 low > 86
Escherichia coli BW25113 0.92 b1686 ydiI hypothetical protein (NCBI) 0.94 b2569 lepA GTP-binding protein LepA (NCBI) low > 76
Escherichia coli ECRC62 0.92 BNILDI_16545 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.94 BNILDI_11875 lepA translation elongation factor 4 low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.92 OHPLBJKB_02038 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.94 OHPLBJKB_01138 Elongation factor 4 low > 73
Escherichia coli BL21 0.92 ECD_01655 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.94 ECD_02463 back-translocating elongation factor EF4, GTPase low > 61
Escherichia coli ECRC98 0.91 JDDGAC_01810 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.94 JDDGAC_25065 lepA translation elongation factor 4 low > 86
Escherichia coli ECRC100 0.91 OKFHMN_27235 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.94 OKFHMN_21400 lepA translation elongation factor 4 low > 80
Escherichia coli ECRC102 0.91 NIAGMN_00830 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.94 NIAGMN_19170 lepA translation elongation factor 4
Escherichia coli ECRC101 0.91 MCAODC_18175 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.94 MCAODC_11930 lepA translation elongation factor 4 low > 87
Escherichia coli ECRC99 0.91 KEDOAH_00875 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.94 KEDOAH_06820 lepA translation elongation factor 4
Enterobacter sp. TBS_079 0.88 MPMX20_01927 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.94 MPMX20_03440 Elongation factor 4 low > 85
Enterobacter asburiae PDN3 0.87 EX28DRAFT_1695 uncharacterized domain 1 0.95 EX28DRAFT_0076 elongation factor 4 low > 76
Klebsiella michiganensis M5al 0.85 BWI76_RS17045 hypothetical protein 0.94 BWI76_RS21335 elongation factor 4
Serratia liquefaciens MT49 0.76 IAI46_11135 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.93 IAI46_19560 elongation factor 4 low > 86
Pectobacterium carotovorum WPP14 0.73 HER17_RS08910 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.93 HER17_RS05805 translation elongation factor 4 low > 75
Dickeya dadantii 3937 0.72 DDA3937_RS12790 hotdog fold thioesterase 0.92 DDA3937_RS15745 elongation factor 4 low > 74
Dickeya dianthicola ME23 0.72 DZA65_RS13320 hotdog fold thioesterase 0.92 DZA65_RS16910 elongation factor 4 low > 75
Dickeya dianthicola 67-19 0.72 HGI48_RS12855 hotdog fold thioesterase 0.92 HGI48_RS15830 elongation factor 4
Erwinia tracheiphila SCR3 0.71 LU632_RS11045 hotdog fold thioesterase 0.92 LU632_RS15395 lepA translation elongation factor 4 low > 74
Rahnella sp. WP5 0.69 EX31_RS13920 hotdog fold thioesterase 0.91 EX31_RS21825 elongation factor 4 low > 89
Pedobacter sp. GW460-11-11-14-LB5 0.60 CA265_RS21595 esterase 0.56 CA265_RS08955 elongation factor 4 low > 88
Echinicola vietnamensis KMM 6221, DSM 17526 0.57 Echvi_2346 uncharacterized domain 1 0.56 Echvi_4645 GTP-binding protein LepA low > 79
Pseudomonas fluorescens SBW25 0.55 PFLU_RS09075 hotdog fold thioesterase 0.75 PFLU_RS05250 elongation factor 4 low > 109
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS09075 hotdog fold thioesterase 0.75 PFLU_RS05250 elongation factor 4 low > 109
Pseudomonas simiae WCS417 0.55 PS417_09020 esterase 0.75 PS417_05180 elongation factor 4
Pseudomonas sp. RS175 0.54 PFR28_03073 Putative esterase 0.75 PFR28_03525 Elongation factor 4
Pseudomonas fluorescens FW300-N2E2 0.53 Pf6N2E2_5878 FIG002571: 4-hydroxybenzoyl-CoA thioesterase domain protein 0.75 Pf6N2E2_5423 Translation elongation factor LepA
Pseudomonas stutzeri RCH2 0.53 Psest_2468 uncharacterized domain 1 0.74 Psest_3095 GTP-binding protein LepA
Pseudomonas fluorescens FW300-N2C3 0.52 AO356_19810 esterase 0.75 AO356_17485 elongation factor 4 low > 104
Vibrio cholerae E7946 ATCC 55056 0.52 CSW01_17125 esterase 0.85 CSW01_12465 elongation factor 4 low > 62
Pseudomonas fluorescens GW456-L13 0.52 PfGW456L13_2050 FIG002571: 4-hydroxybenzoyl-CoA thioesterase domain protein 0.75 PfGW456L13_4842 Translation elongation factor LepA low > 87
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_3522 FIG002571: 4-hydroxybenzoyl-CoA thioesterase domain protein 0.74 Pf1N1B4_895 Translation elongation factor LepA
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS16920 hotdog fold thioesterase 0.69 ABZR86_RS07165 translation elongation factor 4 low > 74
Pseudomonas syringae pv. syringae B728a 0.51 Psyr_2025 Phenylacetic acid degradation-related protein 0.74 Psyr_3954 GTP-binding protein LepA low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.51 Psyr_2025 Phenylacetic acid degradation-related protein 0.74 Psyr_3954 GTP-binding protein LepA low > 86
Lysobacter sp. OAE881 0.51 ABIE51_RS01500 hotdog fold thioesterase 0.69 ABIE51_RS13875 translation elongation factor 4
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_01715 esterase 0.74 AO353_04520 elongation factor 4 low > 101
Acidovorax sp. GW101-3H11 0.50 Ac3H11_4896 uncharacterized domain 1 0.68 Ac3H11_1569 Translation elongation factor LepA low > 79
Rhodanobacter sp. FW510-T8 0.49 OKGIIK_16735 esterase 0.70 OKGIIK_07885 Elongation factor 4 low > 52
Rhodanobacter denitrificans FW104-10B01 0.49 LRK54_RS06895 hotdog fold thioesterase 0.70 LRK54_RS16955 translation elongation factor 4 low > 59
Rhodanobacter denitrificans MT42 0.49 LRK55_RS06640 hotdog fold thioesterase 0.70 LRK55_RS16670 translation elongation factor 4
Hydrogenophaga sp. GW460-11-11-14-LB1 0.47 GFF2002 uncharacterized domain 1 0.68 GFF3343 Translation elongation factor LepA low > 90
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS01500 hypothetical protein 0.70 RR42_RS14055 elongation factor 4 low > 128
Variovorax sp. OAS795 0.46 ABID97_RS03015 hotdog fold thioesterase 0.68 ABID97_RS08350 translation elongation factor 4 low > 91
Variovorax sp. SCN45 0.46 GFF3369 1,4-dihydroxy-2-naphthoyl-CoA hydrolase (EC 3.1.2.28) in menaquinone biosynthesis 0.68 GFF3867 Translation elongation factor LepA low > 127
Shewanella loihica PV-4 0.41 Shew_3192 hypothetical protein (RefSeq) 0.81 Shew_1052 GTP-binding protein LepA (RefSeq) low > 60
Shewanella amazonensis SB2B 0.41 Sama_2944 hypothetical protein (RefSeq) 0.79 Sama_0878 GTP-binding protein LepA (RefSeq) low > 62
Shewanella sp. ANA-3 0.40 Shewana3_0906 hypothetical protein (RefSeq) 0.82 Shewana3_3028 GTP-binding protein LepA (RefSeq) low > 73
Shewanella oneidensis MR-1 0.40 SO1068 conserved hypothetical protein (NCBI ptt file) 0.82 SO1346 lepA GTP-binding protein LepA (NCBI ptt file) low > 76
Phocaeicola vulgatus CL09T03C04 0.30 HMPREF1058_RS16260 hotdog fold thioesterase 0.55 HMPREF1058_RS06410 elongation factor 4 low > 67
Phocaeicola dorei CL03T12C01 0.30 ABI39_RS12150 hotdog fold thioesterase 0.55 ABI39_RS20175 translation elongation factor 4 low > 72
Paraburkholderia sabiae LMG 24235 0.23 QEN71_RS25080 PaaI family thioesterase 0.70 QEN71_RS04600 translation elongation factor 4 low > 153
Paraburkholderia graminis OAS925 0.20 ABIE53_001257 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.71 ABIE53_003038 GTP-binding protein LepA low > 113
Burkholderia phytofirmans PsJN 0.19 BPHYT_RS04910 phenylacetic acid degradation protein 0.72 BPHYT_RS14380 elongation factor 4 low > 109
Paraburkholderia bryophila 376MFSha3.1 0.19 H281DRAFT_00147 uncharacterized domain 1-containing protein 0.72 H281DRAFT_04360 GTP-binding protein LepA low > 103

Not shown: 0 genomes with orthologs for GFF3555 only; 43 genomes with orthologs for GFF2477 only